EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000020318 (Gene tree)
Gene ID: -
Gene Symbol: lsm14b
Alias: -
Full Name: protein LSM14 homolog B-B
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 7376 bases
Position: chrGL831152.1:3868324-3875699
Accession: 100702707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000025606	FDF	PF09532.10	2.7e-08	1	1
ENSONIP00000025605	FDF	PF09532.10	6e-08	1	1
ENSONIP00000025605	SM-ATX	PF14438.6	5.5e-08	1	1
ENSONIP00000025606	SM-ATX	PF14438.6	5.7e-08	1	1
ENSONIP00000025605	LSM14	PF12701.7	1.1e-30	1	1
ENSONIP00000025606	LSM14	PF12701.7	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000025627	-	1167	-	ENSONIP00000025606	388 (aa)	-	I3KWW0
ENSONIT00000025626	-	6503	-	ENSONIP00000025605	365 (aa)	XP_025763234	I3KWV9

Gene Model

Click here to download ENSONIG00000020318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000020318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000020318	lsm14b	91	39.506	ENSONIG00000018243	lsm14aa	85	39.152
ENSONIG00000020318	lsm14b	92	43.767	ENSONIG00000002884	lsm14ab	85	42.092

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000020318	lsm14b	91	56.438	ENSG00000149657	LSM14B	98	52.733	Homo_sapiens
ENSONIG00000020318	lsm14b	100	83.784	ENSAPOG00000001780	lsm14b	100	83.784	Acanthochromis_polyacanthus
ENSONIG00000020318	lsm14b	92	48.883	ENSAMEG00000013430	LSM14B	91	48.371	Ailuropoda_melanoleuca
ENSONIG00000020318	lsm14b	63	39.600	ENSACIG00000003147	LSM14B	87	37.395	Amphilophus_citrinellus
ENSONIG00000020318	lsm14b	99	84.488	ENSACIG00000012266	lsm14b	99	82.271	Amphilophus_citrinellus
ENSONIG00000020318	lsm14b	100	84.865	ENSAOCG00000012380	lsm14b	100	84.865	Amphiprion_ocellaris
ENSONIG00000020318	lsm14b	93	47.453	ENSAOCG00000006667	LSM14B	89	49.284	Amphiprion_ocellaris
ENSONIG00000020318	lsm14b	100	75.000	ENSAPEG00000023633	lsm14b	100	74.255	Amphiprion_percula
ENSONIG00000020318	lsm14b	67	41.869	ENSATEG00000015895	LSM14B	87	42.857	Anabas_testudineus
ENSONIG00000020318	lsm14b	100	73.797	ENSATEG00000016603	lsm14b	100	77.005	Anabas_testudineus
ENSONIG00000020318	lsm14b	82	46.216	ENSAPLG00000013203	LSM14B	89	43.443	Anas_platyrhynchos
ENSONIG00000020318	lsm14b	99	53.165	ENSACAG00000016195	LSM14B	99	51.515	Anolis_carolinensis
ENSONIG00000020318	lsm14b	92	54.247	ENSANAG00000037915	LSM14B	89	53.186	Aotus_nancymaae
ENSONIG00000020318	lsm14b	100	96.730	ENSACLG00000019663	lsm14b	100	96.730	Astatotilapia_calliptera
ENSONIG00000020318	lsm14b	90	60.665	ENSAMXG00000002865	lsm14b	90	61.326	Astyanax_mexicanus
ENSONIG00000020318	lsm14b	92	50.246	ENSBTAG00000021558	LSM14B	90	49.624	Bos_taurus
ENSONIG00000020318	lsm14b	92	54.795	ENSCJAG00000014434	LSM14B	89	54.190	Callithrix_jacchus
ENSONIG00000020318	lsm14b	82	46.594	ENSCAFG00000012518	LSM14B	89	45.856	Canis_familiaris
ENSONIG00000020318	lsm14b	92	55.801	ENSCAFG00020022150	LSM14B	89	53.239	Canis_lupus_dingo
ENSONIG00000020318	lsm14b	92	56.319	ENSCHIG00000010284	-	89	55.742	Capra_hircus
ENSONIG00000020318	lsm14b	99	40.500	ENSCHIG00000022681	-	90	37.602	Capra_hircus
ENSONIG00000020318	lsm14b	82	51.652	ENSTSYG00000031914	LSM14B	79	48.780	Carlito_syrichta
ENSONIG00000020318	lsm14b	82	51.952	ENSCAPG00000013059	LSM14B	89	52.025	Cavia_aperea
ENSONIG00000020318	lsm14b	82	52.108	ENSCPOG00000038080	LSM14B	89	52.188	Cavia_porcellus
ENSONIG00000020318	lsm14b	92	54.472	ENSCCAG00000021267	LSM14B	89	53.973	Cebus_capucinus
ENSONIG00000020318	lsm14b	92	38.275	ENSCCAG00000024900	-	74	36.761	Cebus_capucinus
ENSONIG00000020318	lsm14b	91	56.712	ENSCATG00000036006	LSM14B	89	53.333	Cercocebus_atys
ENSONIG00000020318	lsm14b	81	53.086	ENSCLAG00000003186	LSM14B	89	52.038	Chinchilla_lanigera
ENSONIG00000020318	lsm14b	92	51.220	ENSCSAG00000015729	LSM14B	90	50.620	Chlorocebus_sabaeus
ENSONIG00000020318	lsm14b	69	32.624	ENSCHOG00000006997	-	86	31.621	Choloepus_hoffmanni
ENSONIG00000020318	lsm14b	92	49.510	ENSCPBG00000027065	LSM14B	91	47.132	Chrysemys_picta_bellii
ENSONIG00000020318	lsm14b	82	52.266	ENSCANG00000036986	LSM14B	89	51.724	Colobus_angolensis_palliatus
ENSONIG00000020318	lsm14b	92	55.125	ENSCGRG00001018399	Lsm14b	89	50.541	Cricetulus_griseus_chok1gshd
ENSONIG00000020318	lsm14b	56	38.865	ENSCGRG00000002484	-	82	35.111	Cricetulus_griseus_crigri
ENSONIG00000020318	lsm14b	63	39.116	ENSCGRG00000006111	-	90	35.034	Cricetulus_griseus_crigri
ENSONIG00000020318	lsm14b	99	73.797	ENSCSEG00000004722	lsm14b	99	72.727	Cynoglossus_semilaevis
ENSONIG00000020318	lsm14b	93	49.441	ENSCSEG00000020669	LSM14B	90	47.175	Cynoglossus_semilaevis
ENSONIG00000020318	lsm14b	65	35.714	ENSCVAG00000012433	-	86	32.773	Cyprinodon_variegatus
ENSONIG00000020318	lsm14b	99	57.033	ENSDARG00000025386	lsm14b	99	55.330	Danio_rerio
ENSONIG00000020318	lsm14b	63	41.096	ENSDNOG00000025246	LSM14B	88	40.070	Dasypus_novemcinctus
ENSONIG00000020318	lsm14b	82	51.940	ENSDORG00000016683	Lsm14b	78	51.692	Dipodomys_ordii
ENSONIG00000020318	lsm14b	59	41.975	ENSETEG00000011188	-	99	36.735	Echinops_telfairi
ENSONIG00000020318	lsm14b	94	44.180	ENSETEG00000001869	-	90	43.132	Echinops_telfairi
ENSONIG00000020318	lsm14b	63	45.565	ENSEASG00005023218	LSM14B	85	43.277	Equus_asinus_asinus
ENSONIG00000020318	lsm14b	92	56.593	ENSECAG00000010659	LSM14B	89	56.022	Equus_caballus
ENSONIG00000020318	lsm14b	57	68.000	ENSEEUG00000007331	LSM14B	65	68.000	Erinaceus_europaeus
ENSONIG00000020318	lsm14b	99	61.518	ENSELUG00000005780	lsm14b	99	58.115	Esox_lucius
ENSONIG00000020318	lsm14b	90	53.009	ENSELUG00000016299	LSM14B	90	52.722	Esox_lucius
ENSONIG00000020318	lsm14b	92	56.044	ENSFCAG00000003248	LSM14B	89	52.394	Felis_catus
ENSONIG00000020318	lsm14b	82	45.968	ENSFALG00000010618	LSM14B	90	43.324	Ficedula_albicollis
ENSONIG00000020318	lsm14b	81	52.615	ENSFDAG00000002214	LSM14B	89	51.242	Fukomys_damarensis
ENSONIG00000020318	lsm14b	100	73.925	ENSFHEG00000006237	lsm14b	100	73.925	Fundulus_heteroclitus
ENSONIG00000020318	lsm14b	79	47.267	ENSFHEG00000003362	LSM14B	71	50.530	Fundulus_heteroclitus
ENSONIG00000020318	lsm14b	99	66.667	ENSGMOG00000017115	lsm14b	99	63.172	Gadus_morhua
ENSONIG00000020318	lsm14b	92	51.351	ENSGALG00000005125	LSM14B	90	49.738	Gallus_gallus
ENSONIG00000020318	lsm14b	64	40.562	ENSGAFG00000013723	LSM14B	85	39.111	Gambusia_affinis
ENSONIG00000020318	lsm14b	100	68.633	ENSGAFG00000020318	lsm14b	100	68.633	Gambusia_affinis
ENSONIG00000020318	lsm14b	99	73.138	ENSGACG00000009973	lsm14b	99	73.529	Gasterosteus_aculeatus
ENSONIG00000020318	lsm14b	59	43.220	ENSGAGG00000004106	LSM14B	80	39.631	Gopherus_agassizii
ENSONIG00000020318	lsm14b	83	51.765	ENSGGOG00000005630	LSM14B	85	51.220	Gorilla_gorilla
ENSONIG00000020318	lsm14b	92	55.220	ENSHGLG00000015055	LSM14B	89	54.622	Heterocephalus_glaber_female
ENSONIG00000020318	lsm14b	82	50.610	ENSHGLG00100015273	LSM14B	89	47.319	Heterocephalus_glaber_male
ENSONIG00000020318	lsm14b	94	48.663	ENSHCOG00000018747	LSM14B	90	48.266	Hippocampus_comes
ENSONIG00000020318	lsm14b	68	58.203	ENSHCOG00000004867	lsm14b	100	55.469	Hippocampus_comes
ENSONIG00000020318	lsm14b	90	60.623	ENSIPUG00000014946	lsm14b	94	60.925	Ictalurus_punctatus
ENSONIG00000020318	lsm14b	82	51.662	ENSSTOG00000020482	LSM14B	89	51.411	Ictidomys_tridecemlineatus
ENSONIG00000020318	lsm14b	91	53.444	ENSJJAG00000012728	Lsm14b	89	50.409	Jaculus_jaculus
ENSONIG00000020318	lsm14b	53	36.771	ENSKMAG00000012834	-	86	42.929	Kryptolebias_marmoratus
ENSONIG00000020318	lsm14b	100	72.432	ENSKMAG00000017524	lsm14b	100	75.135	Kryptolebias_marmoratus
ENSONIG00000020318	lsm14b	65	42.400	ENSLBEG00000007951	LSM14B	85	38.158	Labrus_bergylta
ENSONIG00000020318	lsm14b	91	50.498	ENSLACG00000003849	LSM14B	91	47.901	Latimeria_chalumnae
ENSONIG00000020318	lsm14b	99	58.247	ENSLOCG00000003746	lsm14b	90	58.523	Lepisosteus_oculatus
ENSONIG00000020318	lsm14b	82	50.301	ENSLAFG00000007492	LSM14B	89	45.536	Loxodonta_africana
ENSONIG00000020318	lsm14b	91	56.164	ENSMFAG00000041479	LSM14B	89	54.768	Macaca_fascicularis
ENSONIG00000020318	lsm14b	91	56.164	ENSMMUG00000014084	LSM14B	89	54.768	Macaca_mulatta
ENSONIG00000020318	lsm14b	91	56.164	ENSMNEG00000045573	LSM14B	89	54.768	Macaca_nemestrina
ENSONIG00000020318	lsm14b	82	52.395	ENSMLEG00000040895	LSM14B	89	52.174	Mandrillus_leucophaeus
ENSONIG00000020318	lsm14b	100	76.738	ENSMAMG00000020539	lsm14b	100	76.738	Mastacembelus_armatus
ENSONIG00000020318	lsm14b	92	53.561	ENSMAMG00000024124	LSM14B	89	52.647	Mastacembelus_armatus
ENSONIG00000020318	lsm14b	100	96.995	ENSMZEG00005000987	lsm14b	100	96.995	Maylandia_zebra
ENSONIG00000020318	lsm14b	92	48.780	ENSMZEG00005026001	LSM14B	93	49.288	Maylandia_zebra
ENSONIG00000020318	lsm14b	56	35.000	ENSMZEG00005026087	-	64	33.498	Maylandia_zebra
ENSONIG00000020318	lsm14b	83	47.368	ENSMGAG00000005300	LSM14B	89	45.858	Meleagris_gallopavo
ENSONIG00000020318	lsm14b	92	54.848	ENSMAUG00000020700	Lsm14b	89	51.902	Mesocricetus_auratus
ENSONIG00000020318	lsm14b	92	54.891	ENSMICG00000014675	LSM14B	89	54.294	Microcebus_murinus
ENSONIG00000020318	lsm14b	63	39.789	ENSMOCG00000005119	-	91	34.364	Microtus_ochrogaster
ENSONIG00000020318	lsm14b	92	54.596	ENSMOCG00000020600	Lsm14b	89	50.815	Microtus_ochrogaster
ENSONIG00000020318	lsm14b	92	70.166	ENSMMOG00000020042	lsm14b	95	70.166	Mola_mola
ENSONIG00000020318	lsm14b	90	50.578	ENSMMOG00000017321	LSM14B	89	47.701	Mola_mola
ENSONIG00000020318	lsm14b	63	43.345	ENSMODG00000016690	LSM14B	88	38.889	Monodelphis_domestica
ENSONIG00000020318	lsm14b	99	77.961	ENSMALG00000004783	lsm14b	96	78.177	Monopterus_albus
ENSONIG00000020318	lsm14b	92	45.455	ENSMALG00000022251	LSM14B	89	47.989	Monopterus_albus
ENSONIG00000020318	lsm14b	92	53.846	MGP_CAROLIEiJ_G0024770	Lsm14b	89	49.730	Mus_caroli
ENSONIG00000020318	lsm14b	92	53.846	ENSMUSG00000039108	Lsm14b	89	49.730	Mus_musculus
ENSONIG00000020318	lsm14b	92	54.945	MGP_PahariEiJ_G0026214	Lsm14b	89	50.811	Mus_pahari
ENSONIG00000020318	lsm14b	92	53.846	MGP_SPRETEiJ_G0025693	Lsm14b	89	49.730	Mus_spretus
ENSONIG00000020318	lsm14b	87	45.312	ENSMPUG00000007584	LSM14B	91	44.591	Mustela_putorius_furo
ENSONIG00000020318	lsm14b	90	55.337	ENSMLUG00000000304	LSM14B	89	54.494	Myotis_lucifugus
ENSONIG00000020318	lsm14b	82	51.796	ENSNLEG00000015757	LSM14B	89	51.242	Nomascus_leucogenys
ENSONIG00000020318	lsm14b	66	72.340	ENSMEUG00000008267	-	64	73.381	Notamacropus_eugenii
ENSONIG00000020318	lsm14b	92	56.044	ENSODEG00000004099	LSM14B	89	54.396	Octodon_degus
ENSONIG00000020318	lsm14b	74	54.710	ENSOANG00000003370	LSM14B	95	52.117	Ornithorhynchus_anatinus
ENSONIG00000020318	lsm14b	82	51.672	ENSOCUG00000006279	LSM14B	89	47.950	Oryctolagus_cuniculus
ENSONIG00000020318	lsm14b	93	47.075	ENSORLG00000028353	LSM14B	91	46.418	Oryzias_latipes
ENSONIG00000020318	lsm14b	100	75.676	ENSORLG00000013525	lsm14b	100	77.838	Oryzias_latipes
ENSONIG00000020318	lsm14b	64	35.793	ENSORLG00020018191	-	85	33.333	Oryzias_latipes_hni
ENSONIG00000020318	lsm14b	100	75.676	ENSORLG00020020553	lsm14b	100	77.838	Oryzias_latipes_hni
ENSONIG00000020318	lsm14b	100	75.676	ENSORLG00015016862	lsm14b	100	77.838	Oryzias_latipes_hsok
ENSONIG00000020318	lsm14b	93	47.075	ENSORLG00015013157	LSM14B	91	46.418	Oryzias_latipes_hsok
ENSONIG00000020318	lsm14b	63	39.749	ENSOMEG00000000171	-	83	35.135	Oryzias_melastigma
ENSONIG00000020318	lsm14b	100	75.135	ENSOMEG00000023917	lsm14b	100	77.297	Oryzias_melastigma
ENSONIG00000020318	lsm14b	92	49.380	ENSOGAG00000003915	LSM14B	90	46.929	Otolemur_garnettii
ENSONIG00000020318	lsm14b	84	46.791	ENSOARG00000014706	LSM14B	88	46.409	Ovis_aries
ENSONIG00000020318	lsm14b	83	51.765	ENSPPAG00000035799	LSM14B	85	51.220	Pan_paniscus
ENSONIG00000020318	lsm14b	92	56.319	ENSPPRG00000009197	LSM14B	89	52.676	Panthera_pardus
ENSONIG00000020318	lsm14b	63	43.825	ENSPTIG00000021518	LSM14B	88	41.250	Panthera_tigris_altaica
ENSONIG00000020318	lsm14b	91	56.438	ENSPTRG00000013696	LSM14B	89	55.041	Pan_troglodytes
ENSONIG00000020318	lsm14b	91	56.438	ENSPANG00000011747	LSM14B	89	55.556	Papio_anubis
ENSONIG00000020318	lsm14b	91	62.571	ENSPKIG00000003275	lsm14b	85	83.696	Paramormyrops_kingsleyae
ENSONIG00000020318	lsm14b	82	52.252	ENSPSIG00000014762	LSM14B	89	52.439	Pelodiscus_sinensis
ENSONIG00000020318	lsm14b	91	55.769	ENSPEMG00000017688	Lsm14b	90	49.728	Peromyscus_maniculatus_bairdii
ENSONIG00000020318	lsm14b	92	57.618	ENSPCIG00000013405	LSM14B	89	55.586	Phascolarctos_cinereus
ENSONIG00000020318	lsm14b	100	72.237	ENSPFOG00000005631	lsm14b	100	72.237	Poecilia_formosa
ENSONIG00000020318	lsm14b	90	47.324	ENSPLAG00000005793	LSM14B	90	47.522	Poecilia_latipinna
ENSONIG00000020318	lsm14b	100	71.698	ENSPLAG00000002449	lsm14b	100	71.698	Poecilia_latipinna
ENSONIG00000020318	lsm14b	100	72.507	ENSPMEG00000000745	lsm14b	100	72.507	Poecilia_mexicana
ENSONIG00000020318	lsm14b	90	47.143	ENSPMEG00000022953	LSM14B	90	48.547	Poecilia_mexicana
ENSONIG00000020318	lsm14b	61	38.247	ENSPREG00000007828	LSM14B	85	37.860	Poecilia_reticulata
ENSONIG00000020318	lsm14b	92	50.681	ENSPPYG00000011194	LSM14B	89	49.589	Pongo_abelii
ENSONIG00000020318	lsm14b	92	55.769	ENSPCOG00000013625	LSM14B	89	54.622	Propithecus_coquereli
ENSONIG00000020318	lsm14b	90	60.907	ENSPNAG00000012777	lsm14b	90	61.605	Pygocentrus_nattereri
ENSONIG00000020318	lsm14b	92	50.493	ENSRNOG00000054557	Lsm14b	90	46.829	Rattus_norvegicus
ENSONIG00000020318	lsm14b	82	52.108	ENSRBIG00000033461	LSM14B	88	51.562	Rhinopithecus_bieti
ENSONIG00000020318	lsm14b	84	53.254	ENSRROG00000042949	LSM14B	81	52.761	Rhinopithecus_roxellana
ENSONIG00000020318	lsm14b	81	51.385	ENSSBOG00000032820	LSM14B	89	49.845	Saimiri_boliviensis_boliviensis
ENSONIG00000020318	lsm14b	82	53.134	ENSSHAG00000015528	LSM14B	86	52.978	Sarcophilus_harrisii
ENSONIG00000020318	lsm14b	90	63.506	ENSSFOG00015004627	lsm14b	91	63.506	Scleropages_formosus
ENSONIG00000020318	lsm14b	94	50.000	ENSSMAG00000000135	LSM14B	91	49.315	Scophthalmus_maximus
ENSONIG00000020318	lsm14b	100	79.841	ENSSMAG00000012725	lsm14b	100	79.841	Scophthalmus_maximus
ENSONIG00000020318	lsm14b	100	81.600	ENSSDUG00000020977	lsm14b	100	81.915	Seriola_dumerili
ENSONIG00000020318	lsm14b	91	53.846	ENSSDUG00000022770	LSM14B	89	53.198	Seriola_dumerili
ENSONIG00000020318	lsm14b	63	43.629	ENSSLDG00000011354	-	87	39.689	Seriola_lalandi_dorsalis
ENSONIG00000020318	lsm14b	54	39.655	ENSSARG00000007749	-	100	38.362	Sorex_araneus
ENSONIG00000020318	lsm14b	92	50.856	ENSSPUG00000014360	LSM14B	96	49.718	Sphenodon_punctatus
ENSONIG00000020318	lsm14b	68	38.516	ENSSPAG00000018854	-	87	35.878	Stegastes_partitus
ENSONIG00000020318	lsm14b	100	80.978	ENSSPAG00000020915	lsm14b	100	79.076	Stegastes_partitus
ENSONIG00000020318	lsm14b	91	56.267	ENSSSCG00000026052	LSM14B	88	42.446	Sus_scrofa
ENSONIG00000020318	lsm14b	82	51.190	ENSTGUG00000007884	LSM14B	89	47.734	Taeniopygia_guttata
ENSONIG00000020318	lsm14b	91	50.276	ENSTRUG00000001529	LSM14B	90	51.289	Takifugu_rubripes
ENSONIG00000020318	lsm14b	100	74.865	ENSTRUG00000011354	lsm14b	100	74.595	Takifugu_rubripes
ENSONIG00000020318	lsm14b	100	66.921	ENSTNIG00000002445	lsm14b	100	64.394	Tetraodon_nigroviridis
ENSONIG00000020318	lsm14b	75	82.051	ENSTTRG00000011043	LSM14B	89	36.585	Tursiops_truncatus
ENSONIG00000020318	lsm14b	90	49.438	ENSUAMG00000025298	LSM14B	89	48.433	Ursus_americanus
ENSONIG00000020318	lsm14b	90	49.438	ENSUMAG00000000480	LSM14B	89	48.433	Ursus_maritimus
ENSONIG00000020318	lsm14b	82	51.506	ENSVVUG00000015920	LSM14B	88	49.062	Vulpes_vulpes
ENSONIG00000020318	lsm14b	86	54.179	ENSXETG00000001997	lsm14b	99	50.575	Xenopus_tropicalis
ENSONIG00000020318	lsm14b	100	71.622	ENSXMAG00000010013	lsm14b	100	71.622	Xiphophorus_maculatus