EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000020324 (Gene tree)
Gene ID: 100702167
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 7985 bases
Position: chrGL831152.1:3960172-3968156
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000025613	RRM_1	PF00076.22	2.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000025634	-	729	-	ENSONIP00000025613	243 (aa)	-	I3KWW7

Gene Model

Click here to download ENSONIG00000020324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000020324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000020324	-	95	59.016	ENSONIG00000002504	rbm24a	95	60.246
ENSONIG00000020324	-	100	64.400	ENSONIG00000017073	rbm38	100	64.400
ENSONIG00000020324	-	63	71.250	ENSONIG00000003010	rbm24b	99	61.224

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000020324	-	92	66.667	ENSG00000132819	RBM38	94	87.288	Homo_sapiens
ENSONIG00000020324	-	100	91.770	ENSAPOG00000009939	-	99	91.770	Acanthochromis_polyacanthus
ENSONIG00000020324	-	100	64.427	ENSAPOG00000003301	rbm38	98	64.427	Acanthochromis_polyacanthus
ENSONIG00000020324	-	100	64.000	ENSACIG00000000010	rbm38	98	64.000	Amphilophus_citrinellus
ENSONIG00000020324	-	100	97.942	ENSACIG00000012502	-	99	97.942	Amphilophus_citrinellus
ENSONIG00000020324	-	100	64.427	ENSAOCG00000013497	-	98	64.427	Amphiprion_ocellaris
ENSONIG00000020324	-	98	90.717	ENSAOCG00000012559	RBM38	100	90.717	Amphiprion_ocellaris
ENSONIG00000020324	-	100	90.535	ENSAPEG00000023581	-	99	90.535	Amphiprion_percula
ENSONIG00000020324	-	100	64.427	ENSAPEG00000013137	rbm38	98	64.427	Amphiprion_percula
ENSONIG00000020324	-	100	63.492	ENSATEG00000016366	rbm38	98	63.492	Anabas_testudineus
ENSONIG00000020324	-	100	93.416	ENSATEG00000016710	-	99	93.416	Anabas_testudineus
ENSONIG00000020324	-	95	68.376	ENSACAG00000016238	RBM38	90	67.382	Anolis_carolinensis
ENSONIG00000020324	-	92	67.532	ENSANAG00000031959	RBM38	78	94.681	Aotus_nancymaae
ENSONIG00000020324	-	100	99.588	ENSACLG00000019514	-	99	99.588	Astatotilapia_calliptera
ENSONIG00000020324	-	96	65.812	ENSAMXG00000038120	rbm38	97	65.812	Astyanax_mexicanus
ENSONIG00000020324	-	100	79.012	ENSAMXG00000015601	-	99	79.012	Astyanax_mexicanus
ENSONIG00000020324	-	92	66.087	ENSBTAG00000008105	RBM38	88	65.939	Bos_taurus
ENSONIG00000020324	-	53	63.566	WBGene00006321	sup-12	63	78.947	Caenorhabditis_elegans
ENSONIG00000020324	-	92	67.532	ENSCJAG00000019139	RBM38	78	94.681	Callithrix_jacchus
ENSONIG00000020324	-	92	67.965	ENSCAFG00020021943	RBM38	88	67.965	Canis_lupus_dingo
ENSONIG00000020324	-	92	65.652	ENSCHIG00000002609	RBM38	88	65.502	Capra_hircus
ENSONIG00000020324	-	92	66.810	ENSCPOG00000012781	RBM38	88	66.667	Cavia_porcellus
ENSONIG00000020324	-	92	67.532	ENSCCAG00000036872	RBM38	78	94.681	Cebus_capucinus
ENSONIG00000020324	-	92	66.087	ENSCATG00000032133	RBM38	78	94.681	Cercocebus_atys
ENSONIG00000020324	-	92	66.379	ENSCLAG00000005906	RBM38	92	65.801	Chinchilla_lanigera
ENSONIG00000020324	-	92	66.087	ENSCSAG00000015503	RBM38	88	65.939	Chlorocebus_sabaeus
ENSONIG00000020324	-	95	69.231	ENSCPBG00000024059	RBM38	99	67.811	Chrysemys_picta_bellii
ENSONIG00000020324	-	60	62.179	ENSCING00000025102	-	66	62.179	Ciona_intestinalis
ENSONIG00000020324	-	62	63.057	ENSCSAVG00000001132	-	57	62.987	Ciona_savignyi
ENSONIG00000020324	-	95	50.855	ENSCANG00000030105	-	79	49.573	Colobus_angolensis_palliatus
ENSONIG00000020324	-	92	64.069	ENSCGRG00001012928	Rbm38	89	63.913	Cricetulus_griseus_chok1gshd
ENSONIG00000020324	-	100	89.712	ENSCSEG00000004701	-	99	89.712	Cynoglossus_semilaevis
ENSONIG00000020324	-	83	59.804	ENSCSEG00000020943	rbm38	63	64.062	Cynoglossus_semilaevis
ENSONIG00000020324	-	99	57.197	ENSCVAG00000015952	rbm38	98	61.265	Cyprinodon_variegatus
ENSONIG00000020324	-	100	88.066	ENSCVAG00000005472	-	99	88.066	Cyprinodon_variegatus
ENSONIG00000020324	-	100	70.782	ENSDARG00000058818	rbm38	100	70.782	Danio_rerio
ENSONIG00000020324	-	92	66.228	ENSDNOG00000032004	RBM38	98	65.639	Dasypus_novemcinctus
ENSONIG00000020324	-	92	66.234	ENSECAG00000007700	RBM38	88	65.652	Equus_caballus
ENSONIG00000020324	-	92	64.655	ENSEEUG00000013489	RBM38	89	65.778	Erinaceus_europaeus
ENSONIG00000020324	-	100	81.048	ENSELUG00000005849	-	99	81.048	Esox_lucius
ENSONIG00000020324	-	90	64.192	ENSELUG00000000585	-	98	63.755	Esox_lucius
ENSONIG00000020324	-	92	66.957	ENSFCAG00000042916	RBM38	84	87.500	Felis_catus
ENSONIG00000020324	-	73	74.033	ENSFALG00000010805	RBM38	92	72.626	Ficedula_albicollis
ENSONIG00000020324	-	100	83.128	ENSFHEG00000006160	-	99	84.615	Fundulus_heteroclitus
ENSONIG00000020324	-	100	61.265	ENSFHEG00000017748	rbm38	98	61.265	Fundulus_heteroclitus
ENSONIG00000020324	-	75	87.500	ENSGMOG00000016655	-	98	85.326	Gadus_morhua
ENSONIG00000020324	-	95	65.812	ENSGALG00000026081	RBM38	99	66.953	Gallus_gallus
ENSONIG00000020324	-	95	84.783	ENSGACG00000009873	-	100	84.783	Gasterosteus_aculeatus
ENSONIG00000020324	-	95	65.801	ENSGACG00000015224	rbm38	99	65.801	Gasterosteus_aculeatus
ENSONIG00000020324	-	95	69.658	ENSGAGG00000001187	RBM38	99	67.811	Gopherus_agassizii
ENSONIG00000020324	-	100	99.588	ENSHBUG00000011778	-	99	99.588	Haplochromis_burtoni
ENSONIG00000020324	-	100	64.000	ENSHBUG00000012058	rbm38	98	64.000	Haplochromis_burtoni
ENSONIG00000020324	-	92	63.636	ENSHGLG00000015077	RBM38	88	65.801	Heterocephalus_glaber_female
ENSONIG00000020324	-	85	91.262	ENSHCOG00000005622	-	59	91.262	Hippocampus_comes
ENSONIG00000020324	-	81	56.122	ENSHCOG00000019040	rbm38	78	56.122	Hippocampus_comes
ENSONIG00000020324	-	100	72.358	ENSIPUG00000019349	-	99	72.358	Ictalurus_punctatus
ENSONIG00000020324	-	92	59.483	ENSKMAG00000012402	rbm38	98	59.483	Kryptolebias_marmoratus
ENSONIG00000020324	-	100	62.948	ENSLBEG00000018878	rbm38	98	63.745	Labrus_bergylta
ENSONIG00000020324	-	100	90.283	ENSLBEG00000016163	RBM38	99	90.283	Labrus_bergylta
ENSONIG00000020324	-	100	74.897	ENSLOCG00000003456	rbm38	99	74.897	Lepisosteus_oculatus
ENSONIG00000020324	-	92	66.087	ENSMFAG00000043808	RBM38	78	94.681	Macaca_fascicularis
ENSONIG00000020324	-	92	66.087	ENSMMUG00000031391	RBM38	78	94.681	Macaca_mulatta
ENSONIG00000020324	-	92	66.087	ENSMNEG00000034683	RBM38	78	94.681	Macaca_nemestrina
ENSONIG00000020324	-	100	66.000	ENSMAMG00000024135	rbm38	98	64.800	Mastacembelus_armatus
ENSONIG00000020324	-	100	90.947	ENSMAMG00000020499	RBM38	99	90.947	Mastacembelus_armatus
ENSONIG00000020324	-	100	64.000	ENSMZEG00005026036	rbm38	98	64.000	Maylandia_zebra
ENSONIG00000020324	-	100	99.588	ENSMZEG00005000849	-	99	99.588	Maylandia_zebra
ENSONIG00000020324	-	92	65.801	ENSMAUG00000021211	Rbm38	89	65.217	Mesocricetus_auratus
ENSONIG00000020324	-	92	67.672	ENSMICG00000038011	RBM38	98	67.100	Microcebus_murinus
ENSONIG00000020324	-	92	65.368	ENSMOCG00000008715	Rbm38	93	62.810	Microtus_ochrogaster
ENSONIG00000020324	-	100	92.593	ENSMMOG00000020051	-	99	92.593	Mola_mola
ENSONIG00000020324	-	95	65.812	ENSMODG00000016458	RBM38	91	65.678	Monodelphis_domestica
ENSONIG00000020324	-	69	71.176	ENSMALG00000022327	rbm38	98	56.627	Monopterus_albus
ENSONIG00000020324	-	78	96.296	ENSMALG00000004680	RBM38	72	96.296	Monopterus_albus
ENSONIG00000020324	-	92	63.043	MGP_CAROLIEiJ_G0024745	Rbm38	93	63.636	Mus_caroli
ENSONIG00000020324	-	92	63.043	ENSMUSG00000027510	Rbm38	93	63.636	Mus_musculus
ENSONIG00000020324	-	92	63.203	MGP_PahariEiJ_G0026186	Rbm38	93	63.786	Mus_pahari
ENSONIG00000020324	-	92	63.043	MGP_SPRETEiJ_G0025665	Rbm38	93	63.636	Mus_spretus
ENSONIG00000020324	-	72	76.374	ENSMPUG00000006518	RBM38	92	75.000	Mustela_putorius_furo
ENSONIG00000020324	-	92	66.087	ENSMLUG00000011140	RBM38	98	65.066	Myotis_lucifugus
ENSONIG00000020324	-	100	64.400	ENSNBRG00000022685	rbm38	98	64.400	Neolamprologus_brichardi
ENSONIG00000020324	-	100	100.000	ENSNBRG00000022545	-	99	100.000	Neolamprologus_brichardi
ENSONIG00000020324	-	92	66.379	ENSODEG00000007980	RBM38	88	66.234	Octodon_degus
ENSONIG00000020324	-	95	67.094	ENSOANG00000009259	RBM38	83	66.094	Ornithorhynchus_anatinus
ENSONIG00000020324	-	100	89.388	ENSORLG00000027180	-	99	90.612	Oryzias_latipes
ENSONIG00000020324	-	100	57.371	ENSORLG00000012154	rbm38	98	59.055	Oryzias_latipes
ENSONIG00000020324	-	100	59.055	ENSORLG00020017871	rbm38	98	59.055	Oryzias_latipes_hni
ENSONIG00000020324	-	100	89.388	ENSORLG00020020751	-	99	90.612	Oryzias_latipes_hni
ENSONIG00000020324	-	100	59.055	ENSORLG00015012606	rbm38	98	59.055	Oryzias_latipes_hsok
ENSONIG00000020324	-	100	90.574	ENSORLG00015017040	-	99	91.393	Oryzias_latipes_hsok
ENSONIG00000020324	-	100	90.947	ENSOMEG00000023912	-	99	90.947	Oryzias_melastigma
ENSONIG00000020324	-	96	61.633	ENSOMEG00000006805	rbm38	96	61.633	Oryzias_melastigma
ENSONIG00000020324	-	92	67.100	ENSOGAG00000029136	RBM38	88	66.957	Otolemur_garnettii
ENSONIG00000020324	-	92	66.957	ENSPPRG00000009507	RBM38	84	87.500	Panthera_pardus
ENSONIG00000020324	-	52	85.714	ENSPTRG00000045845	-	68	85.714	Pan_troglodytes
ENSONIG00000020324	-	74	75.676	ENSPTRG00000013661	RBM38	82	90.099	Pan_troglodytes
ENSONIG00000020324	-	92	54.348	ENSPANG00000033127	-	90	53.712	Papio_anubis
ENSONIG00000020324	-	92	66.087	ENSPANG00000020919	-	78	94.681	Papio_anubis
ENSONIG00000020324	-	100	69.355	ENSPKIG00000025417	rbm38	99	70.565	Paramormyrops_kingsleyae
ENSONIG00000020324	-	100	73.171	ENSPKIG00000018122	-	95	91.892	Paramormyrops_kingsleyae
ENSONIG00000020324	-	96	67.227	ENSPSIG00000011649	RBM38	94	65.401	Pelodiscus_sinensis
ENSONIG00000020324	-	100	83.806	ENSPMGG00000017094	-	99	85.425	Periophthalmus_magnuspinnatus
ENSONIG00000020324	-	99	61.753	ENSPMGG00000011343	rbm38	98	61.753	Periophthalmus_magnuspinnatus
ENSONIG00000020324	-	95	65.823	ENSPCIG00000013648	RBM38	91	63.983	Phascolarctos_cinereus
ENSONIG00000020324	-	100	58.039	ENSPFOG00000011658	rbm38	98	60.547	Poecilia_formosa
ENSONIG00000020324	-	100	58.594	ENSPLAG00000005218	rbm38	98	60.547	Poecilia_latipinna
ENSONIG00000020324	-	100	87.755	ENSPLAG00000002500	-	99	87.755	Poecilia_latipinna
ENSONIG00000020324	-	100	58.039	ENSPMEG00000015770	rbm38	98	59.533	Poecilia_mexicana
ENSONIG00000020324	-	100	58.039	ENSPREG00000007398	rbm38	98	60.547	Poecilia_reticulata
ENSONIG00000020324	-	92	67.241	ENSPCOG00000026201	RBM38	77	94.681	Propithecus_coquereli
ENSONIG00000020324	-	96	41.667	ENSPVAG00000006457	RBM38	65	85.484	Pteropus_vampyrus
ENSONIG00000020324	-	100	99.588	ENSPNYG00000019727	-	99	99.588	Pundamilia_nyererei
ENSONIG00000020324	-	100	63.600	ENSPNYG00000021373	rbm38	98	63.600	Pundamilia_nyererei
ENSONIG00000020324	-	100	76.955	ENSPNAG00000015123	-	98	82.963	Pygocentrus_nattereri
ENSONIG00000020324	-	96	71.308	ENSPNAG00000010596	rbm38	97	71.308	Pygocentrus_nattereri
ENSONIG00000020324	-	97	64.198	ENSRNOG00000006420	Rbm38	93	64.050	Rattus_norvegicus
ENSONIG00000020324	-	95	53.648	ENSRROG00000036388	-	89	52.790	Rhinopithecus_roxellana
ENSONIG00000020324	-	92	67.672	ENSSBOG00000031053	RBM38	92	91.000	Saimiri_boliviensis_boliviensis
ENSONIG00000020324	-	100	71.255	ENSSFOG00015004453	rbm38	99	73.984	Scleropages_formosus
ENSONIG00000020324	-	100	65.354	ENSSDUG00000022611	rbm38	98	65.354	Seriola_dumerili
ENSONIG00000020324	-	100	92.181	ENSSDUG00000021082	RBM38	99	92.181	Seriola_dumerili
ENSONIG00000020324	-	100	65.354	ENSSLDG00000010845	rbm38	98	65.354	Seriola_lalandi_dorsalis
ENSONIG00000020324	-	100	93.004	ENSSLDG00000011778	RBM38	99	93.004	Seriola_lalandi_dorsalis
ENSONIG00000020324	-	100	63.780	ENSSPAG00000011113	rbm38	98	63.780	Stegastes_partitus
ENSONIG00000020324	-	100	92.181	ENSSPAG00000020989	RBM38	99	92.181	Stegastes_partitus
ENSONIG00000020324	-	92	66.087	ENSSSCG00000007504	RBM38	88	65.939	Sus_scrofa
ENSONIG00000020324	-	96	63.598	ENSTRUG00000024954	rbm38	94	65.690	Takifugu_rubripes
ENSONIG00000020324	-	100	88.525	ENSTRUG00000019869	-	99	88.525	Takifugu_rubripes
ENSONIG00000020324	-	95	86.957	ENSTNIG00000007093	-	99	86.957	Tetraodon_nigroviridis
ENSONIG00000020324	-	74	75.676	ENSUAMG00000019780	RBM38	88	67.532	Ursus_americanus
ENSONIG00000020324	-	92	67.965	ENSVVUG00000017246	RBM38	88	67.965	Vulpes_vulpes
ENSONIG00000020324	-	95	65.385	ENSXETG00000011268	rbm38	98	65.236	Xenopus_tropicalis
ENSONIG00000020324	-	71	77.528	ENSXCOG00000017324	-	68	83.974	Xiphophorus_couchianus
ENSONIG00000020324	-	100	59.524	ENSXMAG00000023662	rbm38	98	62.055	Xiphophorus_maculatus