EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000020904 (Gene tree)
Gene ID: 100712285
Gene Symbol: oscp1a
Alias: -
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 369 bases
Position: chrGL831186.1:1898457-1898825
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000026207	LSM	PF01423.22	5.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000026230	-	369	-	ENSONIP00000026207	122 (aa)	-	I3KYL0

Gene Model

Click here to download ENSONIG00000020904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000020904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000020904	oscp1a	60	34.667	ENSONIG00000012724	lsm4	51	34.667
ENSONIG00000020904	oscp1a	61	35.135	ENSONIG00000002486	snrpd1	62	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000020904	oscp1a	97	66.949	ENSG00000181817	LSM10	96	66.949	Homo_sapiens
ENSONIG00000020904	oscp1a	97	68.644	ENSAMEG00000019854	LSM10	96	68.644	Ailuropoda_melanoleuca
ENSONIG00000020904	oscp1a	98	92.500	ENSACIG00000015420	oscp1a	79	92.500	Amphilophus_citrinellus
ENSONIG00000020904	oscp1a	98	86.667	ENSAOCG00000015618	LSM10	99	86.667	Amphiprion_ocellaris
ENSONIG00000020904	oscp1a	89	83.784	ENSAOCG00000015607	LSM10	86	83.784	Amphiprion_ocellaris
ENSONIG00000020904	oscp1a	98	86.667	ENSAOCG00000014654	-	99	86.667	Amphiprion_ocellaris
ENSONIG00000020904	oscp1a	98	86.667	ENSAPEG00000021845	-	99	86.667	Amphiprion_percula
ENSONIG00000020904	oscp1a	89	83.784	ENSAPEG00000021851	LSM10	86	83.784	Amphiprion_percula
ENSONIG00000020904	oscp1a	95	85.345	ENSATEG00000006310	oscp1a	86	85.345	Anabas_testudineus
ENSONIG00000020904	oscp1a	96	60.684	ENSACAG00000001231	LSM10	95	60.684	Anolis_carolinensis
ENSONIG00000020904	oscp1a	97	66.949	ENSANAG00000018759	-	96	66.949	Aotus_nancymaae
ENSONIG00000020904	oscp1a	97	65.254	ENSANAG00000031489	-	97	65.254	Aotus_nancymaae
ENSONIG00000020904	oscp1a	98	98.333	ENSACLG00000004728	oscp1a	98	98.333	Astatotilapia_calliptera
ENSONIG00000020904	oscp1a	96	75.214	ENSAMXG00000025301	oscp1a	97	75.214	Astyanax_mexicanus
ENSONIG00000020904	oscp1a	98	66.667	ENSBTAG00000024096	LSM10	98	66.667	Bos_taurus
ENSONIG00000020904	oscp1a	97	67.797	ENSCJAG00000044880	LSM10	96	67.797	Callithrix_jacchus
ENSONIG00000020904	oscp1a	97	68.644	ENSCAFG00000003382	LSM10	96	68.644	Canis_familiaris
ENSONIG00000020904	oscp1a	97	68.644	ENSCAFG00020008920	LSM10	96	68.644	Canis_lupus_dingo
ENSONIG00000020904	oscp1a	98	66.667	ENSCHIG00000009398	LSM10	98	66.667	Capra_hircus
ENSONIG00000020904	oscp1a	97	69.492	ENSCAPG00000012567	LSM10	96	69.492	Cavia_aperea
ENSONIG00000020904	oscp1a	97	69.492	ENSCPOG00000039302	LSM10	96	69.492	Cavia_porcellus
ENSONIG00000020904	oscp1a	97	64.407	ENSCCAG00000008378	-	96	64.407	Cebus_capucinus
ENSONIG00000020904	oscp1a	97	66.949	ENSCCAG00000018913	-	96	66.949	Cebus_capucinus
ENSONIG00000020904	oscp1a	95	67.241	ENSCATG00000006589	LSM10	94	67.241	Cercocebus_atys
ENSONIG00000020904	oscp1a	97	67.797	ENSCLAG00000008633	LSM10	96	67.797	Chinchilla_lanigera
ENSONIG00000020904	oscp1a	95	67.241	ENSCSAG00000000134	LSM10	94	67.241	Chlorocebus_sabaeus
ENSONIG00000020904	oscp1a	97	65.000	ENSCHOG00000008615	LSM10	96	65.000	Choloepus_hoffmanni
ENSONIG00000020904	oscp1a	95	67.241	ENSCANG00000019928	LSM10	94	67.241	Colobus_angolensis_palliatus
ENSONIG00000020904	oscp1a	87	63.889	ENSCGRG00001022673	-	88	63.889	Cricetulus_griseus_chok1gshd
ENSONIG00000020904	oscp1a	95	68.103	ENSCGRG00001004317	-	95	68.103	Cricetulus_griseus_chok1gshd
ENSONIG00000020904	oscp1a	95	68.103	ENSCGRG00000014935	-	95	68.103	Cricetulus_griseus_crigri
ENSONIG00000020904	oscp1a	87	63.889	ENSCGRG00000015514	-	88	63.889	Cricetulus_griseus_crigri
ENSONIG00000020904	oscp1a	98	85.714	ENSCSEG00000010374	oscp1a	80	85.714	Cynoglossus_semilaevis
ENSONIG00000020904	oscp1a	97	79.661	ENSCVAG00000001536	oscp1a	89	79.661	Cyprinodon_variegatus
ENSONIG00000020904	oscp1a	70	74.118	ENSDARG00000109563	CABZ01074453.1	99	74.118	Danio_rerio
ENSONIG00000020904	oscp1a	98	75.833	ENSDARG00000101222	oscp1a	99	75.833	Danio_rerio
ENSONIG00000020904	oscp1a	97	67.797	ENSDNOG00000036662	LSM10	96	67.797	Dasypus_novemcinctus
ENSONIG00000020904	oscp1a	95	68.966	ENSDORG00000007579	Lsm10	94	68.966	Dipodomys_ordii
ENSONIG00000020904	oscp1a	95	67.241	ENSETEG00000005703	LSM10	94	67.241	Echinops_telfairi
ENSONIG00000020904	oscp1a	92	50.000	ENSEBUG00000001312	oscp1a	92	50.000	Eptatretus_burgeri
ENSONIG00000020904	oscp1a	97	67.797	ENSEASG00005012194	LSM10	96	67.797	Equus_asinus_asinus
ENSONIG00000020904	oscp1a	97	67.797	ENSECAG00000005071	LSM10	96	67.797	Equus_caballus
ENSONIG00000020904	oscp1a	98	65.833	ENSEEUG00000012032	LSM10	98	65.833	Erinaceus_europaeus
ENSONIG00000020904	oscp1a	98	82.500	ENSELUG00000007452	oscp1a	98	82.500	Esox_lucius
ENSONIG00000020904	oscp1a	96	64.957	ENSFALG00000000851	LSM10	95	64.957	Ficedula_albicollis
ENSONIG00000020904	oscp1a	97	68.644	ENSFDAG00000021056	LSM10	96	68.644	Fukomys_damarensis
ENSONIG00000020904	oscp1a	93	78.261	ENSFHEG00000001058	oscp1a	99	78.261	Fundulus_heteroclitus
ENSONIG00000020904	oscp1a	98	68.067	ENSGMOG00000019832	oscp1a	100	68.067	Gadus_morhua
ENSONIG00000020904	oscp1a	98	65.546	ENSGALG00000002127	LSM10	97	65.546	Gallus_gallus
ENSONIG00000020904	oscp1a	88	71.028	ENSGAFG00000016445	oscp1a	87	71.028	Gambusia_affinis
ENSONIG00000020904	oscp1a	100	87.705	ENSGACG00000002329	oscp1a	100	87.705	Gasterosteus_aculeatus
ENSONIG00000020904	oscp1a	97	64.407	ENSGAGG00000024848	LSM10	96	64.407	Gopherus_agassizii
ENSONIG00000020904	oscp1a	97	66.949	ENSGGOG00000003556	LSM10	96	66.949	Gorilla_gorilla
ENSONIG00000020904	oscp1a	98	99.167	ENSHBUG00000001722	oscp1a	98	99.167	Haplochromis_burtoni
ENSONIG00000020904	oscp1a	97	67.797	ENSHGLG00000011625	LSM10	96	67.797	Heterocephalus_glaber_female
ENSONIG00000020904	oscp1a	97	67.797	ENSHGLG00100001769	LSM10	96	67.797	Heterocephalus_glaber_male
ENSONIG00000020904	oscp1a	85	73.077	ENSIPUG00000005808	oscp1a	90	73.077	Ictalurus_punctatus
ENSONIG00000020904	oscp1a	97	68.644	ENSSTOG00000000606	LSM10	96	68.644	Ictidomys_tridecemlineatus
ENSONIG00000020904	oscp1a	98	86.667	ENSKMAG00000012143	oscp1a	99	86.667	Kryptolebias_marmoratus
ENSONIG00000020904	oscp1a	93	86.842	ENSLBEG00000017764	oscp1a	93	86.842	Labrus_bergylta
ENSONIG00000020904	oscp1a	95	64.655	ENSLACG00000015904	LSM10	89	64.655	Latimeria_chalumnae
ENSONIG00000020904	oscp1a	98	72.500	ENSLOCG00000018277	oscp1a	98	72.500	Lepisosteus_oculatus
ENSONIG00000020904	oscp1a	95	68.103	ENSLAFG00000009600	LSM10	94	68.103	Loxodonta_africana
ENSONIG00000020904	oscp1a	95	67.241	ENSMFAG00000009115	LSM10	94	67.241	Macaca_fascicularis
ENSONIG00000020904	oscp1a	95	67.241	ENSMMUG00000017338	LSM10	94	67.241	Macaca_mulatta
ENSONIG00000020904	oscp1a	95	67.241	ENSMNEG00000020023	LSM10	94	67.241	Macaca_nemestrina
ENSONIG00000020904	oscp1a	95	67.241	ENSMLEG00000025150	LSM10	94	67.241	Mandrillus_leucophaeus
ENSONIG00000020904	oscp1a	98	85.833	ENSMAMG00000004427	oscp1a	98	85.833	Mastacembelus_armatus
ENSONIG00000020904	oscp1a	98	98.333	ENSMZEG00005026307	oscp1a	98	98.333	Maylandia_zebra
ENSONIG00000020904	oscp1a	98	64.706	ENSMGAG00000015707	LSM10	97	64.706	Meleagris_gallopavo
ENSONIG00000020904	oscp1a	95	68.966	ENSMAUG00000016624	Lsm10	95	68.966	Mesocricetus_auratus
ENSONIG00000020904	oscp1a	95	68.103	ENSMOCG00000021943	Lsm10	95	68.103	Microtus_ochrogaster
ENSONIG00000020904	oscp1a	94	86.957	ENSMMOG00000013597	oscp1a	86	86.957	Mola_mola
ENSONIG00000020904	oscp1a	100	71.545	ENSMODG00000023328	LSM10	100	71.545	Monodelphis_domestica
ENSONIG00000020904	oscp1a	56	85.294	ENSMALG00000012661	oscp1a	54	85.294	Monopterus_albus
ENSONIG00000020904	oscp1a	95	68.103	MGP_CAROLIEiJ_G0026467	Lsm10	96	68.539	Mus_caroli
ENSONIG00000020904	oscp1a	95	68.103	ENSMUSG00000050188	Lsm10	96	68.539	Mus_musculus
ENSONIG00000020904	oscp1a	95	68.103	MGP_PahariEiJ_G0028798	Lsm10	96	68.539	Mus_pahari
ENSONIG00000020904	oscp1a	95	68.103	MGP_SPRETEiJ_G0027446	Lsm10	96	68.539	Mus_spretus
ENSONIG00000020904	oscp1a	97	68.644	ENSMPUG00000018593	LSM10	96	68.644	Mustela_putorius_furo
ENSONIG00000020904	oscp1a	97	67.797	ENSMLUG00000023895	LSM10	96	67.797	Myotis_lucifugus
ENSONIG00000020904	oscp1a	95	67.241	ENSNGAG00000015011	Lsm10	94	67.241	Nannospalax_galili
ENSONIG00000020904	oscp1a	100	98.361	ENSNBRG00000014306	oscp1a	99	98.361	Neolamprologus_brichardi
ENSONIG00000020904	oscp1a	97	66.949	ENSNLEG00000033754	LSM10	96	66.949	Nomascus_leucogenys
ENSONIG00000020904	oscp1a	98	70.833	ENSMEUG00000006313	LSM10	98	70.833	Notamacropus_eugenii
ENSONIG00000020904	oscp1a	95	68.966	ENSOPRG00000001699	LSM10	94	68.966	Ochotona_princeps
ENSONIG00000020904	oscp1a	97	67.797	ENSODEG00000019161	LSM10	96	67.797	Octodon_degus
ENSONIG00000020904	oscp1a	100	69.106	ENSOANG00000002066	LSM10	100	69.106	Ornithorhynchus_anatinus
ENSONIG00000020904	oscp1a	97	67.797	ENSOCUG00000005333	LSM10	96	67.797	Oryctolagus_cuniculus
ENSONIG00000020904	oscp1a	98	83.333	ENSORLG00000009504	oscp1a	99	83.333	Oryzias_latipes
ENSONIG00000020904	oscp1a	98	83.333	ENSORLG00020016201	oscp1a	99	83.333	Oryzias_latipes_hni
ENSONIG00000020904	oscp1a	98	81.667	ENSORLG00015007794	oscp1a	99	81.667	Oryzias_latipes_hsok
ENSONIG00000020904	oscp1a	97	68.644	ENSOGAG00000002653	LSM10	96	68.644	Otolemur_garnettii
ENSONIG00000020904	oscp1a	98	66.667	ENSOARG00000009596	LSM10	98	66.667	Ovis_aries
ENSONIG00000020904	oscp1a	97	66.949	ENSPPAG00000023465	LSM10	96	66.949	Pan_paniscus
ENSONIG00000020904	oscp1a	97	67.797	ENSPPRG00000014619	LSM10	96	67.797	Panthera_pardus
ENSONIG00000020904	oscp1a	97	67.797	ENSPTIG00000004613	LSM10	96	67.797	Panthera_tigris_altaica
ENSONIG00000020904	oscp1a	97	66.949	ENSPTRG00000000539	LSM10	96	66.949	Pan_troglodytes
ENSONIG00000020904	oscp1a	95	67.241	ENSPANG00000023172	LSM10	94	67.241	Papio_anubis
ENSONIG00000020904	oscp1a	99	74.380	ENSPKIG00000003728	oscp1a	98	74.380	Paramormyrops_kingsleyae
ENSONIG00000020904	oscp1a	97	63.559	ENSPSIG00000000590	LSM10	96	63.559	Pelodiscus_sinensis
ENSONIG00000020904	oscp1a	63	74.026	ENSPMGG00000015718	oscp1a	100	74.026	Periophthalmus_magnuspinnatus
ENSONIG00000020904	oscp1a	84	70.874	ENSPCIG00000014865	LSM10	76	70.874	Phascolarctos_cinereus
ENSONIG00000020904	oscp1a	97	69.492	ENSPFOG00000020490	oscp1a	100	69.492	Poecilia_formosa
ENSONIG00000020904	oscp1a	99	68.595	ENSPLAG00000016537	oscp1a	92	68.595	Poecilia_latipinna
ENSONIG00000020904	oscp1a	93	69.912	ENSPMEG00000000174	oscp1a	98	69.912	Poecilia_mexicana
ENSONIG00000020904	oscp1a	99	69.421	ENSPREG00000009899	oscp1a	92	69.421	Poecilia_reticulata
ENSONIG00000020904	oscp1a	97	66.949	ENSPPYG00000001539	LSM10	96	66.949	Pongo_abelii
ENSONIG00000020904	oscp1a	97	67.797	ENSPCAG00000002520	LSM10	97	67.797	Procavia_capensis
ENSONIG00000020904	oscp1a	97	68.644	ENSPVAG00000008644	LSM10	96	68.644	Pteropus_vampyrus
ENSONIG00000020904	oscp1a	98	99.167	ENSPNYG00000003138	oscp1a	98	99.167	Pundamilia_nyererei
ENSONIG00000020904	oscp1a	98	78.992	ENSPNAG00000028829	oscp1a	98	78.992	Pygocentrus_nattereri
ENSONIG00000020904	oscp1a	95	67.241	ENSRNOG00000025716	Lsm10	95	67.241	Rattus_norvegicus
ENSONIG00000020904	oscp1a	95	67.241	ENSRBIG00000001561	LSM10	94	67.241	Rhinopithecus_bieti
ENSONIG00000020904	oscp1a	95	67.241	ENSRROG00000011414	LSM10	94	67.241	Rhinopithecus_roxellana
ENSONIG00000020904	oscp1a	97	66.949	ENSSBOG00000036413	-	96	66.949	Saimiri_boliviensis_boliviensis
ENSONIG00000020904	oscp1a	98	70.833	ENSSHAG00000018056	LSM10	98	70.833	Sarcophilus_harrisii
ENSONIG00000020904	oscp1a	98	72.500	ENSSFOG00015019954	lsm10	98	72.500	Scleropages_formosus
ENSONIG00000020904	oscp1a	96	89.744	ENSSMAG00000001297	oscp1a	100	89.744	Scophthalmus_maximus
ENSONIG00000020904	oscp1a	97	85.593	ENSSDUG00000007090	oscp1a	96	85.593	Seriola_dumerili
ENSONIG00000020904	oscp1a	98	85.000	ENSSLDG00000000800	oscp1a	99	85.000	Seriola_lalandi_dorsalis
ENSONIG00000020904	oscp1a	86	69.524	ENSSARG00000004211	LSM10	96	66.667	Sorex_araneus
ENSONIG00000020904	oscp1a	96	91.453	ENSSPAG00000009229	oscp1a	97	91.453	Stegastes_partitus
ENSONIG00000020904	oscp1a	97	66.949	ENSSSCG00000038916	LSM10	96	66.949	Sus_scrofa
ENSONIG00000020904	oscp1a	97	65.254	ENSTGUG00000001602	-	97	65.254	Taeniopygia_guttata
ENSONIG00000020904	oscp1a	97	64.407	ENSTGUG00000001600	-	97	64.407	Taeniopygia_guttata
ENSONIG00000020904	oscp1a	98	81.513	ENSTRUG00000010531	oscp1a	96	81.513	Takifugu_rubripes
ENSONIG00000020904	oscp1a	97	66.949	ENSTBEG00000016674	LSM10	96	66.949	Tupaia_belangeri
ENSONIG00000020904	oscp1a	97	68.644	ENSUAMG00000020265	LSM10	96	68.644	Ursus_americanus
ENSONIG00000020904	oscp1a	98	67.500	ENSUMAG00000001438	LSM10	55	67.500	Ursus_maritimus
ENSONIG00000020904	oscp1a	97	68.644	ENSVVUG00000023209	LSM10	96	68.644	Vulpes_vulpes
ENSONIG00000020904	oscp1a	98	65.000	ENSXETG00000027631	lsm10	98	65.000	Xenopus_tropicalis
ENSONIG00000020904	oscp1a	98	68.067	ENSXCOG00000018776	oscp1a	75	68.067	Xiphophorus_couchianus
ENSONIG00000020904	oscp1a	92	70.536	ENSXMAG00000019963	oscp1a	90	70.536	Xiphophorus_maculatus