EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000021318 (Gene tree)
Gene ID: 100700871
Gene Symbol: cth1
Alias: -
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 903 bases
Position: chrGL831430.1:222220-223122
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000026620	zf-CCCH	PF00642.24	9.5e-31	1	4
ENSONIP00000026620	zf-CCCH	PF00642.24	9.5e-31	2	4
ENSONIP00000026620	zf-CCCH	PF00642.24	9.5e-31	3	4
ENSONIP00000026620	zf-CCCH	PF00642.24	9.5e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000026644	-	903	-	ENSONIP00000026620	300 (aa)	-	I3KZS3

Gene Model

Click here to download ENSONIG00000021318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000021318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000021318	cth1	89	65.343	ENSAPOG00000012552	cth1	95	65.704	Acanthochromis_polyacanthus
ENSONIG00000021318	cth1	89	76.449	ENSACIG00000016026	cth1	100	75.873	Amphilophus_citrinellus
ENSONIG00000021318	cth1	99	66.129	ENSAOCG00000001644	cth1	99	66.129	Amphiprion_ocellaris
ENSONIG00000021318	cth1	99	66.129	ENSAPEG00000008930	cth1	99	66.129	Amphiprion_percula
ENSONIG00000021318	cth1	99	64.634	ENSATEG00000002281	cth1	97	64.706	Anabas_testudineus
ENSONIG00000021318	cth1	89	88.848	ENSACLG00000015353	cth1	95	88.848	Astatotilapia_calliptera
ENSONIG00000021318	cth1	98	55.077	ENSAMXG00000025717	cth1	68	64.000	Astyanax_mexicanus
ENSONIG00000021318	cth1	99	64.688	ENSCSEG00000014617	cth1	99	63.750	Cynoglossus_semilaevis
ENSONIG00000021318	cth1	99	56.051	ENSCVAG00000001680	cth1	65	57.742	Cyprinodon_variegatus
ENSONIG00000021318	cth1	90	58.249	ENSDARG00000057328	cth1	67	66.222	Danio_rerio
ENSONIG00000021318	cth1	99	54.167	ENSELUG00000012738	cth1	67	61.674	Esox_lucius
ENSONIG00000021318	cth1	99	56.329	ENSFHEG00000022665	cth1	99	55.696	Fundulus_heteroclitus
ENSONIG00000021318	cth1	99	61.935	ENSGMOG00000007360	cth1	100	60.261	Gadus_morhua
ENSONIG00000021318	cth1	99	54.658	ENSGAFG00000019288	cth1	99	55.521	Gambusia_affinis
ENSONIG00000021318	cth1	99	64.356	ENSGACG00000000802	cth1	99	64.356	Gasterosteus_aculeatus
ENSONIG00000021318	cth1	99	88.667	ENSHBUG00000014400	cth1	99	88.667	Haplochromis_burtoni
ENSONIG00000021318	cth1	97	51.864	ENSHCOG00000010276	cth1	97	50.847	Hippocampus_comes
ENSONIG00000021318	cth1	95	56.962	ENSIPUG00000018040	cth1	67	66.520	Ictalurus_punctatus
ENSONIG00000021318	cth1	99	60.197	ENSKMAG00000005944	cth1	99	60.526	Kryptolebias_marmoratus
ENSONIG00000021318	cth1	99	63.636	ENSLBEG00000019253	cth1	99	66.458	Labrus_bergylta
ENSONIG00000021318	cth1	80	50.691	ENSLOCG00000002047	cth1	99	51.613	Lepisosteus_oculatus
ENSONIG00000021318	cth1	80	60.166	ENSMAMG00000001525	cth1	65	60.166	Mastacembelus_armatus
ENSONIG00000021318	cth1	99	88.333	ENSMZEG00005022335	cth1	99	88.333	Maylandia_zebra
ENSONIG00000021318	cth1	95	67.105	ENSMMOG00000020518	cth1	100	66.007	Mola_mola
ENSONIG00000021318	cth1	99	52.267	ENSMALG00000020738	cth1	58	66.516	Monopterus_albus
ENSONIG00000021318	cth1	89	82.836	ENSNBRG00000022789	cth1	88	82.836	Neolamprologus_brichardi
ENSONIG00000021318	cth1	99	58.224	ENSORLG00000022847	cth1	99	58.553	Oryzias_latipes
ENSONIG00000021318	cth1	99	58.224	ENSORLG00020011979	cth1	99	58.609	Oryzias_latipes_hni
ENSONIG00000021318	cth1	99	58.224	ENSORLG00015013084	cth1	99	58.882	Oryzias_latipes_hsok
ENSONIG00000021318	cth1	91	60.584	ENSOMEG00000005809	cth1	79	61.594	Oryzias_melastigma
ENSONIG00000021318	cth1	97	50.617	ENSPKIG00000015883	cth1	95	49.691	Paramormyrops_kingsleyae
ENSONIG00000021318	cth1	99	62.654	ENSPMGG00000004275	cth1	100	61.728	Periophthalmus_magnuspinnatus
ENSONIG00000021318	cth1	99	56.211	ENSPFOG00000013583	cth1	93	57.862	Poecilia_formosa
ENSONIG00000021318	cth1	99	56.522	ENSPLAG00000018158	cth1	93	58.176	Poecilia_latipinna
ENSONIG00000021318	cth1	99	56.211	ENSPMEG00000005744	cth1	99	57.862	Poecilia_mexicana
ENSONIG00000021318	cth1	99	54.545	ENSPREG00000004099	cth1	100	57.595	Poecilia_reticulata
ENSONIG00000021318	cth1	91	80.292	ENSPNYG00000016705	cth1	93	80.292	Pundamilia_nyererei
ENSONIG00000021318	cth1	95	56.962	ENSPNAG00000013147	cth1	99	54.381	Pygocentrus_nattereri
ENSONIG00000021318	cth1	87	53.004	ENSSFOG00015017190	cth1	62	60.099	Scleropages_formosus
ENSONIG00000021318	cth1	99	62.500	ENSSMAG00000007977	cth1	99	66.250	Scophthalmus_maximus
ENSONIG00000021318	cth1	99	64.242	ENSSDUG00000004321	cth1	99	65.138	Seriola_dumerili
ENSONIG00000021318	cth1	100	64.759	ENSSLDG00000004516	-	100	65.046	Seriola_lalandi_dorsalis
ENSONIG00000021318	cth1	99	65.152	ENSSLDG00000010023	-	99	65.443	Seriola_lalandi_dorsalis
ENSONIG00000021318	cth1	99	64.653	ENSSLDG00000012760	cth1	99	64.939	Seriola_lalandi_dorsalis
ENSONIG00000021318	cth1	100	64.890	ENSSPAG00000018659	cth1	100	65.094	Stegastes_partitus
ENSONIG00000021318	cth1	99	59.062	ENSTRUG00000012770	cth1	99	59.375	Takifugu_rubripes
ENSONIG00000021318	cth1	99	60.185	ENSTNIG00000000740	cth1	99	60.312	Tetraodon_nigroviridis
ENSONIG00000021318	cth1	83	57.600	ENSXCOG00000003710	cth1	82	56.410	Xiphophorus_couchianus
ENSONIG00000021318	cth1	99	54.403	ENSXMAG00000023885	cth1	99	55.911	Xiphophorus_maculatus