EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000000473 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 8016 bases
Position: chrscaffold_8494:34772-42787
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000000437	MBD	PF01429.19	8.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000000475	MBD4-201	1704	-	ENSOPRP00000000437	567 (aa)	-	UPI0001775D8E

Gene Model

Click here to download ENSOPRG00000000473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000000473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000000473	MBD4	99	65.690	ENSG00000129071	MBD4	99	93.889	Homo_sapiens
ENSOPRG00000000473	MBD4	85	41.634	ENSAPOG00000021668	mbd4	95	42.549	Acanthochromis_polyacanthus
ENSOPRG00000000473	MBD4	100	62.867	ENSAMEG00000004562	MBD4	100	62.867	Ailuropoda_melanoleuca
ENSOPRG00000000473	MBD4	85	42.000	ENSAOCG00000001157	mbd4	95	41.700	Amphiprion_ocellaris
ENSOPRG00000000473	MBD4	85	42.200	ENSAPEG00000016131	mbd4	95	42.095	Amphiprion_percula
ENSOPRG00000000473	MBD4	85	42.549	ENSATEG00000014594	MBD4	86	42.549	Anabas_testudineus
ENSOPRG00000000473	MBD4	87	41.811	ENSACAG00000014733	MBD4	89	41.811	Anolis_carolinensis
ENSOPRG00000000473	MBD4	99	63.112	ENSBTAG00000021645	MBD4	100	63.112	Bos_taurus
ENSOPRG00000000473	MBD4	99	64.298	ENSCJAG00000017293	MBD4	99	64.298	Callithrix_jacchus
ENSOPRG00000000473	MBD4	99	63.085	ENSCAFG00000004867	MBD4	99	63.085	Canis_familiaris
ENSOPRG00000000473	MBD4	99	63.085	ENSCAFG00020007082	MBD4	99	63.085	Canis_lupus_dingo
ENSOPRG00000000473	MBD4	99	63.986	ENSCHIG00000009760	MBD4	100	63.986	Capra_hircus
ENSOPRG00000000473	MBD4	99	64.076	ENSCCAG00000029796	MBD4	99	64.076	Cebus_capucinus
ENSOPRG00000000473	MBD4	99	63.903	ENSCATG00000035211	MBD4	99	63.903	Cercocebus_atys
ENSOPRG00000000473	MBD4	99	59.266	ENSCLAG00000008974	MBD4	100	59.266	Chinchilla_lanigera
ENSOPRG00000000473	MBD4	99	64.421	ENSCSAG00000009037	MBD4	99	64.421	Chlorocebus_sabaeus
ENSOPRG00000000473	MBD4	87	49.715	ENSCPBG00000014704	MBD4	89	49.715	Chrysemys_picta_bellii
ENSOPRG00000000473	MBD4	99	64.421	ENSCANG00000007120	MBD4	99	64.421	Colobus_angolensis_palliatus
ENSOPRG00000000473	MBD4	99	59.233	ENSCGRG00001003507	Mbd4	100	59.408	Cricetulus_griseus_chok1gshd
ENSOPRG00000000473	MBD4	99	59.233	ENSCGRG00000010974	Mbd4	100	59.408	Cricetulus_griseus_crigri
ENSOPRG00000000473	MBD4	99	64.223	ENSDNOG00000049619	MBD4	100	64.223	Dasypus_novemcinctus
ENSOPRG00000000473	MBD4	80	55.022	ENSDORG00000000902	-	98	54.219	Dipodomys_ordii
ENSOPRG00000000473	MBD4	99	65.271	ENSEASG00005014800	MBD4	100	65.271	Equus_asinus_asinus
ENSOPRG00000000473	MBD4	99	64.747	ENSECAG00000022106	MBD4	100	64.747	Equus_caballus
ENSOPRG00000000473	MBD4	90	56.654	ENSEEUG00000011459	MBD4	97	56.654	Erinaceus_europaeus
ENSOPRG00000000473	MBD4	100	63.903	ENSFCAG00000000083	MBD4	100	63.903	Felis_catus
ENSOPRG00000000473	MBD4	81	45.607	ENSFALG00000013663	MBD4	99	45.639	Ficedula_albicollis
ENSOPRG00000000473	MBD4	94	48.630	ENSGAGG00000018644	MBD4	98	48.630	Gopherus_agassizii
ENSOPRG00000000473	MBD4	99	65.517	ENSGGOG00000010698	MBD4	99	65.517	Gorilla_gorilla
ENSOPRG00000000473	MBD4	99	59.826	ENSHGLG00000009034	MBD4	100	59.826	Heterocephalus_glaber_female
ENSOPRG00000000473	MBD4	99	60.000	ENSHGLG00100000135	MBD4	100	60.000	Heterocephalus_glaber_male
ENSOPRG00000000473	MBD4	99	60.453	ENSSTOG00000020663	MBD4	100	60.453	Ictidomys_tridecemlineatus
ENSOPRG00000000473	MBD4	99	62.630	ENSLAFG00000010609	MBD4	99	62.630	Loxodonta_africana
ENSOPRG00000000473	MBD4	99	63.731	ENSMFAG00000002266	MBD4	99	63.731	Macaca_fascicularis
ENSOPRG00000000473	MBD4	99	63.855	ENSMMUG00000012723	MBD4	99	63.855	Macaca_mulatta
ENSOPRG00000000473	MBD4	96	62.478	ENSMNEG00000029752	MBD4	99	62.478	Macaca_nemestrina
ENSOPRG00000000473	MBD4	99	63.731	ENSMLEG00000024859	MBD4	99	63.731	Mandrillus_leucophaeus
ENSOPRG00000000473	MBD4	99	64.348	ENSMICG00000008022	MBD4	99	64.348	Microcebus_murinus
ENSOPRG00000000473	MBD4	67	40.967	ENSMOCG00000002466	-	97	40.967	Microtus_ochrogaster
ENSOPRG00000000473	MBD4	86	55.734	ENSMODG00000006399	-	99	55.734	Monodelphis_domestica
ENSOPRG00000000473	MBD4	85	40.557	ENSMALG00000021517	mbd4	87	40.557	Monopterus_albus
ENSOPRG00000000473	MBD4	99	59.478	MGP_CAROLIEiJ_G0028760	Mbd4	100	59.478	Mus_caroli
ENSOPRG00000000473	MBD4	99	59.720	ENSMUSG00000030322	Mbd4	100	59.720	Mus_musculus
ENSOPRG00000000473	MBD4	99	59.516	MGP_PahariEiJ_G0022511	-	100	59.516	Mus_pahari
ENSOPRG00000000473	MBD4	99	58.844	MGP_SPRETEiJ_G0029788	Mbd4	100	58.844	Mus_spretus
ENSOPRG00000000473	MBD4	99	61.458	ENSMPUG00000017195	MBD4	99	61.458	Mustela_putorius_furo
ENSOPRG00000000473	MBD4	95	65.328	ENSMLUG00000014766	MBD4	99	65.328	Myotis_lucifugus
ENSOPRG00000000473	MBD4	99	66.090	ENSNLEG00000005337	MBD4	99	66.090	Nomascus_leucogenys
ENSOPRG00000000473	MBD4	85	41.800	ENSONIG00000017212	mbd4	100	41.800	Oreochromis_niloticus
ENSOPRG00000000473	MBD4	72	44.626	ENSOANG00000004589	-	96	44.626	Ornithorhynchus_anatinus
ENSOPRG00000000473	MBD4	99	64.605	ENSOCUG00000013006	MBD4	100	64.605	Oryctolagus_cuniculus
ENSOPRG00000000473	MBD4	86	42.254	ENSORLG00000011049	mbd4	98	42.570	Oryzias_latipes
ENSOPRG00000000473	MBD4	86	42.424	ENSORLG00020020013	mbd4	98	43.030	Oryzias_latipes_hni
ENSOPRG00000000473	MBD4	85	42.531	ENSORLG00015015342	mbd4	97	42.680	Oryzias_latipes_hsok
ENSOPRG00000000473	MBD4	99	61.391	ENSOGAG00000010236	MBD4	100	61.391	Otolemur_garnettii
ENSOPRG00000000473	MBD4	99	63.462	ENSOARG00000014699	MBD4	100	63.462	Ovis_aries
ENSOPRG00000000473	MBD4	99	64.655	ENSPPAG00000036528	MBD4	99	64.655	Pan_paniscus
ENSOPRG00000000473	MBD4	100	63.558	ENSPPRG00000016480	MBD4	100	63.558	Panthera_pardus
ENSOPRG00000000473	MBD4	99	65.345	ENSPTRG00000015377	MBD4	99	65.345	Pan_troglodytes
ENSOPRG00000000473	MBD4	99	65.285	ENSPANG00000015047	MBD4	99	65.285	Papio_anubis
ENSOPRG00000000473	MBD4	92	45.423	ENSPSIG00000007892	MBD4	95	45.423	Pelodiscus_sinensis
ENSOPRG00000000473	MBD4	93	52.788	ENSPEMG00000006226	Mbd4	99	52.788	Peromyscus_maniculatus_bairdii
ENSOPRG00000000473	MBD4	89	54.335	ENSPCIG00000002276	-	98	54.335	Phascolarctos_cinereus
ENSOPRG00000000473	MBD4	99	64.249	ENSPPYG00000013417	MBD4	99	64.249	Pongo_abelii
ENSOPRG00000000473	MBD4	95	59.710	ENSPCAG00000012915	MBD4	99	60.182	Procavia_capensis
ENSOPRG00000000473	MBD4	100	65.976	ENSPVAG00000005238	MBD4	100	65.976	Pteropus_vampyrus
ENSOPRG00000000473	MBD4	99	59.272	ENSRNOG00000010919	Mbd4	100	59.272	Rattus_norvegicus
ENSOPRG00000000473	MBD4	99	64.594	ENSRBIG00000027722	MBD4	99	64.594	Rhinopithecus_bieti
ENSOPRG00000000473	MBD4	99	64.421	ENSRROG00000029136	MBD4	99	64.421	Rhinopithecus_roxellana
ENSOPRG00000000473	MBD4	99	64.818	ENSSBOG00000016810	MBD4	100	64.818	Saimiri_boliviensis_boliviensis
ENSOPRG00000000473	MBD4	96	53.750	ENSSHAG00000012953	MBD4	98	53.750	Sarcophilus_harrisii
ENSOPRG00000000473	MBD4	64	78.235	ENSSDUG00000001365	mbd4	80	78.235	Seriola_dumerili
ENSOPRG00000000473	MBD4	54	75.221	ENSSLDG00000010295	MBD4	67	75.221	Seriola_lalandi_dorsalis
ENSOPRG00000000473	MBD4	80	53.079	ENSSARG00000004496	-	80	53.079	Sorex_araneus
ENSOPRG00000000473	MBD4	86	49.031	ENSSPUG00000017344	MBD4	91	49.031	Sphenodon_punctatus
ENSOPRG00000000473	MBD4	99	64.921	ENSSSCG00000033303	MBD4	100	64.921	Sus_scrofa
ENSOPRG00000000473	MBD4	50	62.871	ENSTNIG00000017927	mbd4	67	62.871	Tetraodon_nigroviridis
ENSOPRG00000000473	MBD4	87	62.385	ENSTBEG00000003041	-	87	62.385	Tupaia_belangeri
ENSOPRG00000000473	MBD4	95	65.631	ENSTTRG00000011265	MBD4	98	65.631	Tursiops_truncatus
ENSOPRG00000000473	MBD4	86	65.868	ENSUAMG00000000814	MBD4	100	65.868	Ursus_americanus
ENSOPRG00000000473	MBD4	99	63.415	ENSUMAG00000017542	MBD4	100	63.415	Ursus_maritimus
ENSOPRG00000000473	MBD4	66	64.744	ENSVPAG00000004040	-	68	64.744	Vicugna_pacos
ENSOPRG00000000473	MBD4	99	62.694	ENSVVUG00000014222	MBD4	99	62.694	Vulpes_vulpes
ENSOPRG00000000473	MBD4	56	66.986	ENSXETG00000026622	mbd4	69	66.986	Xenopus_tropicalis