EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000000854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 9828 bases
Position: chrGeneScaffold_1617:72930-82757
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000000784	zf-C2H2	PF00096.26	1.2e-27	1	6
ENSOPRP00000000784	zf-C2H2	PF00096.26	1.2e-27	2	6
ENSOPRP00000000784	zf-C2H2	PF00096.26	1.2e-27	3	6
ENSOPRP00000000784	zf-C2H2	PF00096.26	1.2e-27	4	6
ENSOPRP00000000784	zf-C2H2	PF00096.26	1.2e-27	5	6
ENSOPRP00000000784	zf-C2H2	PF00096.26	1.2e-27	6	6
ENSOPRP00000000784	zf-met	PF12874.7	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000000854	-	1197	-	ENSOPRP00000000784	398 (aa)	-	UPI00017765A8

Gene Model

Click here to download ENSOPRG00000000854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000000854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000000854	-	61	30.303	ENSOPRG00000011725	ZNF367	70	30.303
ENSOPRG00000000854	-	50	31.088	ENSOPRG00000011038	ZNF771	87	31.100
ENSOPRG00000000854	-	51	34.104	ENSOPRG00000001825	ZNF2	57	34.104
ENSOPRG00000000854	-	50	34.634	ENSOPRG00000006123	ZFP1	60	34.314
ENSOPRG00000000854	-	51	34.653	ENSOPRG00000003198	ZNF81	54	34.653
ENSOPRG00000000854	-	53	32.547	ENSOPRG00000009545	ZNF45	64	34.545
ENSOPRG00000000854	-	51	34.091	ENSOPRG00000014061	ZNF317	81	34.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000000854	-	89	72.423	ENSAMEG00000015824	GTF3A	99	72.981	Ailuropoda_melanoleuca
ENSOPRG00000000854	-	88	71.469	ENSBTAG00000012600	GTF3A	99	71.469	Bos_taurus
ENSOPRG00000000854	-	89	73.743	ENSCAFG00000006794	GTF3A	99	73.743	Canis_familiaris
ENSOPRG00000000854	-	94	66.921	ENSCHIG00000021040	-	84	70.787	Capra_hircus
ENSOPRG00000000854	-	88	70.904	ENSCHIG00000010341	-	99	70.904	Capra_hircus
ENSOPRG00000000854	-	81	72.644	ENSTSYG00000004206	GTF3A	98	72.948	Carlito_syrichta
ENSOPRG00000000854	-	63	81.102	ENSCAPG00000015862	GTF3A	99	81.938	Cavia_aperea
ENSOPRG00000000854	-	82	72.561	ENSCPOG00000010143	GTF3A	99	73.171	Cavia_porcellus
ENSOPRG00000000854	-	78	77.170	ENSCLAG00000003912	GTF3A	95	77.814	Chinchilla_lanigera
ENSOPRG00000000854	-	91	69.003	ENSDNOG00000037405	-	88	69.272	Dasypus_novemcinctus
ENSOPRG00000000854	-	92	69.169	ENSETEG00000003225	GTF3A	96	69.730	Echinops_telfairi
ENSOPRG00000000854	-	90	72.527	ENSEASG00005022495	-	81	73.077	Equus_asinus_asinus
ENSOPRG00000000854	-	85	63.235	ENSEASG00005013216	-	86	65.015	Equus_asinus_asinus
ENSOPRG00000000854	-	90	73.077	ENSECAG00000014803	GTF3A	81	73.626	Equus_caballus
ENSOPRG00000000854	-	84	68.047	ENSECAG00000024825	-	78	68.047	Equus_caballus
ENSOPRG00000000854	-	90	71.271	ENSEEUG00000004307	GTF3A	89	71.547	Erinaceus_europaeus
ENSOPRG00000000854	-	90	74.725	ENSFCAG00000006982	GTF3A	84	74.725	Felis_catus
ENSOPRG00000000854	-	78	76.527	ENSFDAG00000016841	GTF3A	96	76.527	Fukomys_damarensis
ENSOPRG00000000854	-	78	76.849	ENSHGLG00000004173	GTF3A	97	76.849	Heterocephalus_glaber_female
ENSOPRG00000000854	-	78	76.849	ENSHGLG00100011561	GTF3A	97	76.849	Heterocephalus_glaber_male
ENSOPRG00000000854	-	79	75.241	ENSSTOG00000013853	GTF3A	99	75.563	Ictidomys_tridecemlineatus
ENSOPRG00000000854	-	70	71.786	ENSJJAG00000011501	Gtf3a	90	71.786	Jaculus_jaculus
ENSOPRG00000000854	-	89	65.847	ENSLAFG00000027315	GTF3A	99	65.847	Loxodonta_africana
ENSOPRG00000000854	-	84	73.156	ENSMAUG00000016253	Gtf3a	92	73.156	Mesocricetus_auratus
ENSOPRG00000000854	-	90	73.699	ENSMICG00000014763	GTF3A	99	73.699	Microcebus_murinus
ENSOPRG00000000854	-	83	74.328	MGP_CAROLIEiJ_G0028031	Gtf3a	92	74.328	Mus_caroli
ENSOPRG00000000854	-	83	74.030	ENSMUSG00000016503	Gtf3a	92	74.030	Mus_musculus
ENSOPRG00000000854	-	83	74.107	MGP_PahariEiJ_G0024597	Gtf3a	92	74.107	Mus_pahari
ENSOPRG00000000854	-	83	74.030	MGP_SPRETEiJ_G0029029	Gtf3a	92	74.030	Mus_spretus
ENSOPRG00000000854	-	90	75.482	ENSMPUG00000005835	GTF3A	98	76.033	Mustela_putorius_furo
ENSOPRG00000000854	-	83	77.039	ENSMLUG00000002158	GTF3A	100	77.039	Myotis_lucifugus
ENSOPRG00000000854	-	89	73.130	ENSNLEG00000000331	GTF3A	99	73.130	Nomascus_leucogenys
ENSOPRG00000000854	-	80	67.391	ENSMEUG00000010089	GTF3A	98	65.970	Notamacropus_eugenii
ENSOPRG00000000854	-	94	69.211	ENSODEG00000006725	GTF3A	85	73.538	Octodon_degus
ENSOPRG00000000854	-	90	78.771	ENSOCUG00000011713	GTF3A	82	78.771	Oryctolagus_cuniculus
ENSOPRG00000000854	-	89	72.853	ENSOGAG00000014589	GTF3A	99	72.853	Otolemur_garnettii
ENSOPRG00000000854	-	89	70.787	ENSOARG00000012551	GTF3A	98	70.787	Ovis_aries
ENSOPRG00000000854	-	89	75.140	ENSPPRG00000002368	GTF3A	99	75.140	Panthera_pardus
ENSOPRG00000000854	-	80	68.731	ENSPTIG00000018958	GTF3A	80	68.731	Panthera_tigris_altaica
ENSOPRG00000000854	-	62	52.756	ENSPSIG00000011722	GTF3A	95	52.756	Pelodiscus_sinensis
ENSOPRG00000000854	-	88	73.239	ENSPPYG00000005235	GTF3A	99	73.239	Pongo_abelii
ENSOPRG00000000854	-	96	68.718	ENSPCOG00000016742	GTF3A	83	71.662	Propithecus_coquereli
ENSOPRG00000000854	-	95	70.079	ENSPVAG00000012837	GTF3A	87	70.845	Pteropus_vampyrus
ENSOPRG00000000854	-	89	66.482	ENSRROG00000043264	GTF3A	99	66.482	Rhinopithecus_roxellana
ENSOPRG00000000854	-	80	69.565	ENSSHAG00000016965	GTF3A	99	63.760	Sarcophilus_harrisii
ENSOPRG00000000854	-	78	84.984	ENSSARG00000010692	GTF3A	89	83.642	Sorex_araneus
ENSOPRG00000000854	-	77	65.161	ENSSPUG00000005307	GTF3A	83	65.161	Sphenodon_punctatus
ENSOPRG00000000854	-	75	41.000	ENSTRUG00000005241	gtf3ab	88	40.968	Takifugu_rubripes
ENSOPRG00000000854	-	71	69.580	ENSTBEG00000012075	GTF3A	61	69.580	Tupaia_belangeri
ENSOPRG00000000854	-	96	65.394	ENSTTRG00000008538	GTF3A	89	67.391	Tursiops_truncatus
ENSOPRG00000000854	-	89	74.652	ENSUAMG00000019189	GTF3A	99	74.652	Ursus_americanus
ENSOPRG00000000854	-	82	72.289	ENSUMAG00000016941	GTF3A	99	73.579	Ursus_maritimus
ENSOPRG00000000854	-	81	67.278	ENSVPAG00000004995	GTF3A	99	67.890	Vicugna_pacos
ENSOPRG00000000854	-	89	73.950	ENSVVUG00000009197	GTF3A	99	73.950	Vulpes_vulpes