EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000000856 (Gene tree)
Gene ID: -
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 663 bases
Position: chrscaffold_54664:501-1163
Accession: 13629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000000777	RRM_1	PF00076.22	9e-38	1	2
ENSOPRP00000000777	RRM_1	PF00076.22	9e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000000846	PABPC5-201	663	-	ENSOPRP00000000777	221 (aa)	-	UPI00017755F0

Gene Model

Click here to download ENSOPRG00000000856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000000856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000000856	PABPC5	94	65.217	ENSOPRG00000011984	PABPC4	59	65.500
ENSOPRG00000000856	PABPC5	71	31.818	ENSOPRG00000016546	-	64	31.214
ENSOPRG00000000856	PABPC5	94	58.454	ENSOPRG00000011846	PABPC1L	59	58.500
ENSOPRG00000000856	PABPC5	93	67.805	ENSOPRG00000009667	PABPC3	57	68.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000000856	PABPC5	100	97.285	ENSG00000174740	PABPC5	98	97.285	Homo_sapiens
ENSOPRG00000000856	PABPC5	99	97.727	ENSAMEG00000020114	PABPC5	98	97.727	Ailuropoda_melanoleuca
ENSOPRG00000000856	PABPC5	100	97.285	ENSANAG00000005063	PABPC5	98	97.285	Aotus_nancymaae
ENSOPRG00000000856	PABPC5	100	97.285	ENSBTAG00000019942	PABPC5	99	97.285	Bos_taurus
ENSOPRG00000000856	PABPC5	100	96.833	ENSCJAG00000003665	PABPC5	98	96.833	Callithrix_jacchus
ENSOPRG00000000856	PABPC5	99	97.727	ENSCAFG00000017452	PABPC5	98	97.727	Canis_familiaris
ENSOPRG00000000856	PABPC5	100	97.285	ENSCHIG00000019004	PABPC5	99	97.285	Capra_hircus
ENSOPRG00000000856	PABPC5	100	97.738	ENSTSYG00000036351	PABPC5	98	97.738	Carlito_syrichta
ENSOPRG00000000856	PABPC5	99	43.231	ENSCAPG00000010714	PABPC5	75	43.231	Cavia_aperea
ENSOPRG00000000856	PABPC5	100	95.475	ENSCPOG00000002555	PABPC5	98	95.475	Cavia_porcellus
ENSOPRG00000000856	PABPC5	100	97.285	ENSCCAG00000032154	PABPC5	98	97.285	Cebus_capucinus
ENSOPRG00000000856	PABPC5	100	97.285	ENSCATG00000043083	PABPC5	98	97.285	Cercocebus_atys
ENSOPRG00000000856	PABPC5	100	96.380	ENSCLAG00000000647	PABPC5	98	96.380	Chinchilla_lanigera
ENSOPRG00000000856	PABPC5	100	97.285	ENSCSAG00000000065	PABPC5	98	97.285	Chlorocebus_sabaeus
ENSOPRG00000000856	PABPC5	100	97.285	ENSCANG00000011473	PABPC5	98	97.285	Colobus_angolensis_palliatus
ENSOPRG00000000856	PABPC5	100	94.570	ENSCGRG00000018699	Pabpc5	98	94.570	Cricetulus_griseus_crigri
ENSOPRG00000000856	PABPC5	100	69.820	ENSETEG00000011832	PABPC5	98	69.820	Echinops_telfairi
ENSOPRG00000000856	PABPC5	100	98.190	ENSEASG00005014396	PABPC5	98	98.190	Equus_asinus_asinus
ENSOPRG00000000856	PABPC5	100	98.190	ENSECAG00000003452	PABPC5	98	98.190	Equus_caballus
ENSOPRG00000000856	PABPC5	99	97.727	ENSFCAG00000004998	PABPC5	98	97.727	Felis_catus
ENSOPRG00000000856	PABPC5	100	97.738	ENSFDAG00000000126	PABPC5	98	97.738	Fukomys_damarensis
ENSOPRG00000000856	PABPC5	100	97.285	ENSGGOG00000007622	PABPC5	98	97.285	Gorilla_gorilla
ENSOPRG00000000856	PABPC5	91	98.246	ENSJJAG00000011960	Pabpc5	96	98.246	Jaculus_jaculus
ENSOPRG00000000856	PABPC5	100	97.285	ENSMFAG00000024561	PABPC5	98	97.285	Macaca_fascicularis
ENSOPRG00000000856	PABPC5	100	97.285	ENSMMUG00000011562	PABPC5	98	97.285	Macaca_mulatta
ENSOPRG00000000856	PABPC5	100	97.285	ENSMNEG00000037604	PABPC5	98	97.285	Macaca_nemestrina
ENSOPRG00000000856	PABPC5	100	97.285	ENSMLEG00000028318	PABPC5	98	97.285	Mandrillus_leucophaeus
ENSOPRG00000000856	PABPC5	100	97.738	ENSMICG00000041706	PABPC5	98	97.738	Microcebus_murinus
ENSOPRG00000000856	PABPC5	100	96.833	ENSMOCG00000001554	Pabpc5	95	96.833	Microtus_ochrogaster
ENSOPRG00000000856	PABPC5	99	95.890	MGP_CAROLIEiJ_G0033367	Pabpc5	97	95.890	Mus_caroli
ENSOPRG00000000856	PABPC5	99	95.890	ENSMUSG00000034732	Pabpc5	97	95.890	Mus_musculus
ENSOPRG00000000856	PABPC5	100	96.380	MGP_PahariEiJ_G0031908	Pabpc5	98	96.380	Mus_pahari
ENSOPRG00000000856	PABPC5	99	95.890	MGP_SPRETEiJ_G0034533	Pabpc5	97	95.890	Mus_spretus
ENSOPRG00000000856	PABPC5	99	96.364	ENSMPUG00000018465	PABPC5	98	96.364	Mustela_putorius_furo
ENSOPRG00000000856	PABPC5	100	96.833	ENSMLUG00000008244	PABPC5	98	96.833	Myotis_lucifugus
ENSOPRG00000000856	PABPC5	91	98.246	ENSNGAG00000004371	Pabpc5	96	98.246	Nannospalax_galili
ENSOPRG00000000856	PABPC5	100	97.285	ENSNLEG00000035086	PABPC5	98	97.285	Nomascus_leucogenys
ENSOPRG00000000856	PABPC5	100	99.548	ENSOCUG00000010919	PABPC5	98	99.548	Oryctolagus_cuniculus
ENSOPRG00000000856	PABPC5	100	96.833	ENSOGAG00000006882	PABPC5	98	96.833	Otolemur_garnettii
ENSOPRG00000000856	PABPC5	100	97.738	ENSOARG00000010260	PABPC5	99	97.738	Ovis_aries
ENSOPRG00000000856	PABPC5	100	97.285	ENSPPAG00000007378	PABPC5	98	97.285	Pan_paniscus
ENSOPRG00000000856	PABPC5	99	97.727	ENSPPRG00000010742	PABPC5	98	97.727	Panthera_pardus
ENSOPRG00000000856	PABPC5	99	97.727	ENSPTIG00000001480	PABPC5	98	97.727	Panthera_tigris_altaica
ENSOPRG00000000856	PABPC5	100	97.285	ENSPTRG00000022078	PABPC5	98	97.285	Pan_troglodytes
ENSOPRG00000000856	PABPC5	100	97.285	ENSPANG00000018282	PABPC5	98	97.285	Papio_anubis
ENSOPRG00000000856	PABPC5	100	95.928	ENSPEMG00000000171	Pabpc5	95	95.928	Peromyscus_maniculatus_bairdii
ENSOPRG00000000856	PABPC5	100	97.285	ENSPPYG00000020526	PABPC5	98	97.285	Pongo_abelii
ENSOPRG00000000856	PABPC5	100	97.285	ENSPCAG00000015577	PABPC5	99	97.285	Procavia_capensis
ENSOPRG00000000856	PABPC5	100	98.190	ENSPCOG00000000676	PABPC5	98	98.190	Propithecus_coquereli
ENSOPRG00000000856	PABPC5	100	97.738	ENSPVAG00000006465	PABPC5	98	97.738	Pteropus_vampyrus
ENSOPRG00000000856	PABPC5	100	96.833	ENSRNOG00000003354	Pabpc5	98	96.833	Rattus_norvegicus
ENSOPRG00000000856	PABPC5	100	97.285	ENSRBIG00000011760	PABPC5	98	97.285	Rhinopithecus_bieti
ENSOPRG00000000856	PABPC5	100	97.285	ENSRROG00000036708	PABPC5	98	97.285	Rhinopithecus_roxellana
ENSOPRG00000000856	PABPC5	100	97.285	ENSSBOG00000008658	PABPC5	98	97.285	Saimiri_boliviensis_boliviensis
ENSOPRG00000000856	PABPC5	100	96.833	ENSSARG00000014012	PABPC5	98	96.833	Sorex_araneus
ENSOPRG00000000856	PABPC5	100	97.285	ENSSSCG00000040194	PABPC5	98	97.285	Sus_scrofa
ENSOPRG00000000856	PABPC5	100	98.643	ENSTBEG00000016482	PABPC5	98	98.643	Tupaia_belangeri
ENSOPRG00000000856	PABPC5	99	97.727	ENSUAMG00000013627	PABPC5	98	97.727	Ursus_americanus
ENSOPRG00000000856	PABPC5	99	97.727	ENSUMAG00000023934	PABPC5	98	97.727	Ursus_maritimus
ENSOPRG00000000856	PABPC5	100	97.738	ENSVPAG00000001063	PABPC5	98	97.738	Vicugna_pacos
ENSOPRG00000000856	PABPC5	99	98.182	ENSVVUG00000013172	PABPC5	98	98.182	Vulpes_vulpes