EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000000885 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 179870 bases
Position: chrGeneScaffold_1840:939-180808
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000000826	ResIII	PF04851.15	9.7e-10	1	1
ENSOPRP00000000826	BRK	PF07533.16	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000000898	-	4956	-	ENSOPRP00000000826	1651 (aa)	-	UPI0001776D00

Gene Model

Click here to download ENSOPRG00000000885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000000885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000000885	-	74	72.414	ENSOPRG00000013474	SMARCA2	75	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000000885	-	75	100.000	ENSG00000127616	SMARCA4	100	95.541	Homo_sapiens
ENSOPRG00000000885	-	76	96.552	ENSAPOG00000004542	SMARCA4	88	96.552	Acanthochromis_polyacanthus
ENSOPRG00000000885	-	63	100.000	ENSAPOG00000003509	smarca4a	80	100.000	Acanthochromis_polyacanthus
ENSOPRG00000000885	-	78	93.103	ENSAMEG00000010868	SMARCA4	79	93.103	Ailuropoda_melanoleuca
ENSOPRG00000000885	-	77	89.655	ENSACIG00000003035	-	81	89.655	Amphilophus_citrinellus
ENSOPRG00000000885	-	78	96.552	ENSACIG00000021550	smarca4a	79	96.552	Amphilophus_citrinellus
ENSOPRG00000000885	-	76	93.103	ENSAOCG00000009450	-	79	93.103	Amphiprion_ocellaris
ENSOPRG00000000885	-	75	96.552	ENSAOCG00000019167	smarca4a	88	96.552	Amphiprion_ocellaris
ENSOPRG00000000885	-	79	96.552	ENSAPEG00000015559	smarca4a	92	96.552	Amphiprion_percula
ENSOPRG00000000885	-	76	93.103	ENSAPEG00000023108	-	77	93.103	Amphiprion_percula
ENSOPRG00000000885	-	79	93.103	ENSATEG00000001094	-	86	93.103	Anabas_testudineus
ENSOPRG00000000885	-	76	96.552	ENSATEG00000011524	smarca4a	82	96.552	Anabas_testudineus
ENSOPRG00000000885	-	78	93.676	ENSANAG00000036991	SMARCA4	73	100.000	Aotus_nancymaae
ENSOPRG00000000885	-	77	89.655	ENSACLG00000008638	-	82	89.655	Astatotilapia_calliptera
ENSOPRG00000000885	-	78	100.000	ENSACLG00000000163	smarca4a	81	100.000	Astatotilapia_calliptera
ENSOPRG00000000885	-	79	93.103	ENSAMXG00000021023	smarca4a	82	93.103	Astyanax_mexicanus
ENSOPRG00000000885	-	76	82.759	ENSAMXG00000011238	-	91	82.759	Astyanax_mexicanus
ENSOPRG00000000885	-	78	94.286	ENSBTAG00000019220	SMARCA4	80	93.103	Bos_taurus
ENSOPRG00000000885	-	78	93.281	ENSCJAG00000005936	SMARCA4	79	93.103	Callithrix_jacchus
ENSOPRG00000000885	-	78	93.281	ENSCAFG00000017584	SMARCA4	80	93.103	Canis_familiaris
ENSOPRG00000000885	-	75	100.000	ENSCAFG00020024620	SMARCA4	75	100.000	Canis_lupus_dingo
ENSOPRG00000000885	-	78	94.286	ENSCHIG00000015318	SMARCA4	80	93.103	Capra_hircus
ENSOPRG00000000885	-	75	100.000	ENSTSYG00000012966	SMARCA4	76	100.000	Carlito_syrichta
ENSOPRG00000000885	-	76	93.103	ENSCAPG00000015932	SMARCA4	82	93.103	Cavia_aperea
ENSOPRG00000000885	-	78	93.103	ENSCPOG00000015549	SMARCA4	81	93.103	Cavia_porcellus
ENSOPRG00000000885	-	78	93.676	ENSCCAG00000031660	SMARCA4	79	93.103	Cebus_capucinus
ENSOPRG00000000885	-	75	100.000	ENSCATG00000029530	SMARCA4	75	100.000	Cercocebus_atys
ENSOPRG00000000885	-	78	94.694	ENSCLAG00000011946	SMARCA4	79	94.694	Chinchilla_lanigera
ENSOPRG00000000885	-	78	93.103	ENSCPBG00000009994	SMARCA4	80	93.103	Chrysemys_picta_bellii
ENSOPRG00000000885	-	75	100.000	ENSCANG00000036013	SMARCA4	75	100.000	Colobus_angolensis_palliatus
ENSOPRG00000000885	-	77	95.175	ENSCGRG00001016732	Smarca4	80	93.103	Cricetulus_griseus_chok1gshd
ENSOPRG00000000885	-	77	95.175	ENSCGRG00000017242	Smarca4	82	93.103	Cricetulus_griseus_crigri
ENSOPRG00000000885	-	79	93.103	ENSCSEG00000014771	smarca4a	77	93.103	Cynoglossus_semilaevis
ENSOPRG00000000885	-	76	96.552	ENSCVAG00000003018	-	81	96.552	Cyprinodon_variegatus
ENSOPRG00000000885	-	78	93.103	ENSCVAG00000006979	smarca4a	80	93.103	Cyprinodon_variegatus
ENSOPRG00000000885	-	78	93.103	ENSDARG00000077226	smarca4a	80	93.103	Danio_rerio
ENSOPRG00000000885	-	74	86.207	ENSDARG00000104339	SMARCA4	77	86.207	Danio_rerio
ENSOPRG00000000885	-	79	93.103	ENSDNOG00000048847	SMARCA4	76	93.103	Dasypus_novemcinctus
ENSOPRG00000000885	-	72	92.135	ENSDORG00000002544	Smarca4	83	77.739	Dipodomys_ordii
ENSOPRG00000000885	-	76	95.142	ENSETEG00000013361	SMARCA4	78	93.103	Echinops_telfairi
ENSOPRG00000000885	-	75	100.000	ENSEASG00005006167	SMARCA4	82	93.103	Equus_asinus_asinus
ENSOPRG00000000885	-	78	93.103	ENSECAG00000008334	SMARCA4	80	93.103	Equus_caballus
ENSOPRG00000000885	-	71	93.103	ENSELUG00000023232	-	74	93.103	Esox_lucius
ENSOPRG00000000885	-	78	86.207	ENSELUG00000010247	smarca4a	81	86.207	Esox_lucius
ENSOPRG00000000885	-	75	100.000	ENSFCAG00000004894	SMARCA4	75	100.000	Felis_catus
ENSOPRG00000000885	-	73	93.103	ENSFALG00000004208	SMARCA4	79	93.103	Ficedula_albicollis
ENSOPRG00000000885	-	78	93.103	ENSFDAG00000012237	SMARCA4	85	93.103	Fukomys_damarensis
ENSOPRG00000000885	-	79	93.103	ENSFHEG00000010182	smarca4a	89	93.103	Fundulus_heteroclitus
ENSOPRG00000000885	-	78	96.552	ENSFHEG00000007902	-	80	96.552	Fundulus_heteroclitus
ENSOPRG00000000885	-	70	93.651	ENSGMOG00000002649	smarca4a	72	93.151	Gadus_morhua
ENSOPRG00000000885	-	67	82.759	ENSGMOG00000005756	-	68	82.759	Gadus_morhua
ENSOPRG00000000885	-	64	86.454	ENSGALG00000047145	SMARCA4	92	78.292	Gallus_gallus
ENSOPRG00000000885	-	67	93.103	ENSGAFG00000014900	smarca4a	80	93.103	Gambusia_affinis
ENSOPRG00000000885	-	76	93.103	ENSGAFG00000008827	-	80	93.103	Gambusia_affinis
ENSOPRG00000000885	-	76	93.103	ENSGACG00000006691	smarca4a	80	93.103	Gasterosteus_aculeatus
ENSOPRG00000000885	-	77	86.207	ENSGACG00000016033	-	78	86.207	Gasterosteus_aculeatus
ENSOPRG00000000885	-	78	93.103	ENSGAGG00000016757	SMARCA4	80	93.103	Gopherus_agassizii
ENSOPRG00000000885	-	75	100.000	ENSGGOG00000009882	SMARCA4	75	100.000	Gorilla_gorilla
ENSOPRG00000000885	-	78	100.000	ENSHBUG00000021172	smarca4a	80	100.000	Haplochromis_burtoni
ENSOPRG00000000885	-	77	89.655	ENSHBUG00000005447	-	81	89.655	Haplochromis_burtoni
ENSOPRG00000000885	-	78	93.103	ENSHGLG00000010519	SMARCA4	81	93.103	Heterocephalus_glaber_female
ENSOPRG00000000885	-	78	93.103	ENSHGLG00100013774	SMARCA4	81	93.103	Heterocephalus_glaber_male
ENSOPRG00000000885	-	78	96.552	ENSHCOG00000009510	smarca4a	81	96.552	Hippocampus_comes
ENSOPRG00000000885	-	78	96.552	ENSIPUG00000006107	smarca4a	83	96.552	Ictalurus_punctatus
ENSOPRG00000000885	-	77	82.759	ENSIPUG00000016346	-	77	82.759	Ictalurus_punctatus
ENSOPRG00000000885	-	78	93.103	ENSSTOG00000007939	SMARCA4	81	93.103	Ictidomys_tridecemlineatus
ENSOPRG00000000885	-	77	95.614	ENSJJAG00000012877	Smarca4	81	93.103	Jaculus_jaculus
ENSOPRG00000000885	-	76	93.103	ENSKMAG00000011931	smarca4a	80	93.103	Kryptolebias_marmoratus
ENSOPRG00000000885	-	78	96.552	ENSKMAG00000019518	-	78	96.552	Kryptolebias_marmoratus
ENSOPRG00000000885	-	71	96.552	ENSLBEG00000020655	-	77	96.552	Labrus_bergylta
ENSOPRG00000000885	-	78	93.103	ENSLBEG00000017383	smarca4a	82	93.103	Labrus_bergylta
ENSOPRG00000000885	-	78	93.103	ENSLOCG00000007820	smarca4a	80	93.103	Lepisosteus_oculatus
ENSOPRG00000000885	-	78	93.103	ENSLAFG00000001433	SMARCA4	80	93.103	Loxodonta_africana
ENSOPRG00000000885	-	75	100.000	ENSMFAG00000032146	SMARCA4	75	100.000	Macaca_fascicularis
ENSOPRG00000000885	-	75	100.000	ENSMMUG00000012042	SMARCA4	75	100.000	Macaca_mulatta
ENSOPRG00000000885	-	75	100.000	ENSMNEG00000028512	SMARCA4	81	93.103	Macaca_nemestrina
ENSOPRG00000000885	-	75	100.000	ENSMLEG00000034976	SMARCA4	75	100.000	Mandrillus_leucophaeus
ENSOPRG00000000885	-	78	93.103	ENSMAMG00000009256	smarca4a	80	93.103	Mastacembelus_armatus
ENSOPRG00000000885	-	77	93.103	ENSMAMG00000002841	-	79	93.103	Mastacembelus_armatus
ENSOPRG00000000885	-	77	89.655	ENSMZEG00005023861	-	80	89.655	Maylandia_zebra
ENSOPRG00000000885	-	78	100.000	ENSMZEG00005003889	smarca4a	80	100.000	Maylandia_zebra
ENSOPRG00000000885	-	78	93.103	ENSMAUG00000020731	Smarca4	81	93.103	Mesocricetus_auratus
ENSOPRG00000000885	-	75	100.000	ENSMICG00000009806	SMARCA4	74	100.000	Microcebus_murinus
ENSOPRG00000000885	-	78	93.103	ENSMOCG00000022209	Smarca4	80	93.103	Microtus_ochrogaster
ENSOPRG00000000885	-	79	89.655	ENSMMOG00000008466	-	79	89.655	Mola_mola
ENSOPRG00000000885	-	73	79.389	ENSMMOG00000007571	smarca4a	79	82.443	Mola_mola
ENSOPRG00000000885	-	77	93.805	ENSMODG00000006287	SMARCA4	81	93.103	Monodelphis_domestica
ENSOPRG00000000885	-	78	96.552	ENSMALG00000003388	smarca4a	80	96.552	Monopterus_albus
ENSOPRG00000000885	-	79	93.103	ENSMALG00000021534	-	91	93.103	Monopterus_albus
ENSOPRG00000000885	-	78	93.103	MGP_CAROLIEiJ_G0031879	Smarca4	80	93.103	Mus_caroli
ENSOPRG00000000885	-	78	93.103	ENSMUSG00000032187	Smarca4	80	93.103	Mus_musculus
ENSOPRG00000000885	-	78	93.117	MGP_PahariEiJ_G0014745	Smarca4	80	93.103	Mus_pahari
ENSOPRG00000000885	-	78	93.103	MGP_SPRETEiJ_G0033003	Smarca4	80	93.103	Mus_spretus
ENSOPRG00000000885	-	78	93.281	ENSMPUG00000005711	SMARCA4	80	93.103	Mustela_putorius_furo
ENSOPRG00000000885	-	78	93.103	ENSMLUG00000004491	-	80	93.103	Myotis_lucifugus
ENSOPRG00000000885	-	78	96.552	ENSNGAG00000021852	Smarca4	81	96.552	Nannospalax_galili
ENSOPRG00000000885	-	79	100.000	ENSNBRG00000011457	smarca4a	83	100.000	Neolamprologus_brichardi
ENSOPRG00000000885	-	77	89.655	ENSNBRG00000018865	-	88	89.655	Neolamprologus_brichardi
ENSOPRG00000000885	-	73	100.000	ENSNLEG00000012389	SMARCA4	75	100.000	Nomascus_leucogenys
ENSOPRG00000000885	-	77	94.737	ENSODEG00000017127	SMARCA4	78	94.737	Octodon_degus
ENSOPRG00000000885	-	77	89.655	ENSONIG00000018040	-	77	89.655	Oreochromis_niloticus
ENSOPRG00000000885	-	78	96.552	ENSONIG00000008196	smarca4a	80	96.552	Oreochromis_niloticus
ENSOPRG00000000885	-	78	93.469	ENSOCUG00000001787	SMARCA4	81	93.103	Oryctolagus_cuniculus
ENSOPRG00000000885	-	79	89.655	ENSORLG00000015452	smarca4a	80	89.655	Oryzias_latipes
ENSOPRG00000000885	-	76	93.103	ENSORLG00000003955	-	87	93.103	Oryzias_latipes
ENSOPRG00000000885	-	76	93.103	ENSORLG00020009728	-	87	93.103	Oryzias_latipes_hni
ENSOPRG00000000885	-	79	89.655	ENSORLG00020004611	smarca4a	89	89.655	Oryzias_latipes_hni
ENSOPRG00000000885	-	76	93.103	ENSORLG00015007739	-	86	93.103	Oryzias_latipes_hsok
ENSOPRG00000000885	-	79	89.655	ENSORLG00015016560	smarca4a	80	89.655	Oryzias_latipes_hsok
ENSOPRG00000000885	-	76	93.103	ENSOMEG00000016626	-	77	93.103	Oryzias_melastigma
ENSOPRG00000000885	-	78	93.103	ENSOMEG00000007486	smarca4a	80	93.103	Oryzias_melastigma
ENSOPRG00000000885	-	78	93.103	ENSOGAG00000016148	SMARCA4	90	93.103	Otolemur_garnettii
ENSOPRG00000000885	-	78	93.103	ENSOARG00000017454	SMARCA4	81	93.103	Ovis_aries
ENSOPRG00000000885	-	75	100.000	ENSPPAG00000043191	SMARCA4	75	100.000	Pan_paniscus
ENSOPRG00000000885	-	75	100.000	ENSPPRG00000000064	SMARCA4	75	100.000	Panthera_pardus
ENSOPRG00000000885	-	72	100.000	ENSPTIG00000017447	SMARCA4	78	95.652	Panthera_tigris_altaica
ENSOPRG00000000885	-	75	100.000	ENSPTRG00000010488	SMARCA4	75	100.000	Pan_troglodytes
ENSOPRG00000000885	-	75	100.000	ENSPANG00000011042	SMARCA4	75	100.000	Papio_anubis
ENSOPRG00000000885	-	76	86.207	ENSPKIG00000010087	-	78	86.207	Paramormyrops_kingsleyae
ENSOPRG00000000885	-	79	100.000	ENSPKIG00000007770	SMARCA4	81	100.000	Paramormyrops_kingsleyae
ENSOPRG00000000885	-	78	93.103	ENSPSIG00000005547	SMARCA4	80	93.103	Pelodiscus_sinensis
ENSOPRG00000000885	-	78	93.103	ENSPEMG00000020389	Smarca4	80	93.103	Peromyscus_maniculatus_bairdii
ENSOPRG00000000885	-	77	93.805	ENSPCIG00000017138	SMARCA4	80	93.103	Phascolarctos_cinereus
ENSOPRG00000000885	-	76	89.655	ENSPFOG00000007892	smarca4a	80	89.655	Poecilia_formosa
ENSOPRG00000000885	-	76	96.552	ENSPFOG00000012930	-	77	96.552	Poecilia_formosa
ENSOPRG00000000885	-	76	89.655	ENSPLAG00000014294	smarca4a	80	89.655	Poecilia_latipinna
ENSOPRG00000000885	-	76	96.552	ENSPLAG00000018616	-	77	96.552	Poecilia_latipinna
ENSOPRG00000000885	-	76	89.655	ENSPMEG00000003725	smarca4a	81	89.655	Poecilia_mexicana
ENSOPRG00000000885	-	76	96.552	ENSPMEG00000008929	-	78	96.552	Poecilia_mexicana
ENSOPRG00000000885	-	76	89.655	ENSPREG00000014608	smarca4a	80	89.655	Poecilia_reticulata
ENSOPRG00000000885	-	76	96.552	ENSPREG00000014823	-	78	96.552	Poecilia_reticulata
ENSOPRG00000000885	-	78	93.281	ENSPPYG00000009568	SMARCA4	81	93.103	Pongo_abelii
ENSOPRG00000000885	-	75	100.000	ENSPCOG00000023011	SMARCA4	75	100.000	Propithecus_coquereli
ENSOPRG00000000885	-	71	100.000	ENSPVAG00000007787	SMARCA4	73	100.000	Pteropus_vampyrus
ENSOPRG00000000885	-	79	100.000	ENSPNYG00000000717	smarca4a	81	100.000	Pundamilia_nyererei
ENSOPRG00000000885	-	77	89.655	ENSPNYG00000023995	-	81	89.655	Pundamilia_nyererei
ENSOPRG00000000885	-	77	93.103	ENSPNAG00000024136	smarca4a	82	93.103	Pygocentrus_nattereri
ENSOPRG00000000885	-	79	82.759	ENSPNAG00000006636	-	84	82.759	Pygocentrus_nattereri
ENSOPRG00000000885	-	78	93.103	ENSRNOG00000009271	Smarca4	80	93.103	Rattus_norvegicus
ENSOPRG00000000885	-	75	100.000	ENSRBIG00000038696	SMARCA4	75	100.000	Rhinopithecus_bieti
ENSOPRG00000000885	-	75	100.000	ENSRROG00000045509	SMARCA4	75	100.000	Rhinopithecus_roxellana
ENSOPRG00000000885	-	75	100.000	ENSSBOG00000026896	SMARCA4	75	100.000	Saimiri_boliviensis_boliviensis
ENSOPRG00000000885	-	77	93.103	ENSSHAG00000001642	SMARCA4	80	93.103	Sarcophilus_harrisii
ENSOPRG00000000885	-	78	93.103	ENSSFOG00015013823	smarca4	80	93.103	Scleropages_formosus
ENSOPRG00000000885	-	72	96.552	ENSSFOG00015009921	-	73	96.552	Scleropages_formosus
ENSOPRG00000000885	-	76	93.103	ENSSMAG00000014082	-	79	93.103	Scophthalmus_maximus
ENSOPRG00000000885	-	78	93.103	ENSSMAG00000003200	smarca4a	80	93.103	Scophthalmus_maximus
ENSOPRG00000000885	-	74	96.552	ENSSDUG00000017298	smarca4a	76	96.552	Seriola_dumerili
ENSOPRG00000000885	-	76	89.655	ENSSDUG00000005388	-	80	89.655	Seriola_dumerili
ENSOPRG00000000885	-	76	89.655	ENSSLDG00000023663	-	78	89.655	Seriola_lalandi_dorsalis
ENSOPRG00000000885	-	79	96.552	ENSSLDG00000024486	smarca4a	91	96.552	Seriola_lalandi_dorsalis
ENSOPRG00000000885	-	51	96.552	ENSSARG00000013477	SMARCA4	67	96.552	Sorex_araneus
ENSOPRG00000000885	-	72	93.103	ENSSPUG00000004558	SMARCA4	77	93.103	Sphenodon_punctatus
ENSOPRG00000000885	-	76	93.103	ENSSPAG00000012533	-	82	93.103	Stegastes_partitus
ENSOPRG00000000885	-	79	96.552	ENSSPAG00000004248	smarca4a	82	96.552	Stegastes_partitus
ENSOPRG00000000885	-	78	93.676	ENSSSCG00000013629	SMARCA4	80	93.103	Sus_scrofa
ENSOPRG00000000885	-	75	89.655	ENSTRUG00000004885	smarca4a	87	89.655	Takifugu_rubripes
ENSOPRG00000000885	-	76	93.103	ENSTRUG00000001378	SMARCA4	79	93.103	Takifugu_rubripes
ENSOPRG00000000885	-	73	96.552	ENSTNIG00000004536	SMARCA4	73	96.552	Tetraodon_nigroviridis
ENSOPRG00000000885	-	58	82.759	ENSTNIG00000004859	-	84	82.759	Tetraodon_nigroviridis
ENSOPRG00000000885	-	78	94.024	ENSTTRG00000009519	SMARCA4	81	93.103	Tursiops_truncatus
ENSOPRG00000000885	-	78	93.281	ENSUAMG00000014661	SMARCA4	80	93.103	Ursus_americanus
ENSOPRG00000000885	-	74	100.000	ENSUMAG00000022005	SMARCA4	80	95.197	Ursus_maritimus
ENSOPRG00000000885	-	78	93.281	ENSVVUG00000017820	SMARCA4	78	93.103	Vulpes_vulpes
ENSOPRG00000000885	-	79	93.103	ENSXETG00000009355	smarca4	82	93.103	Xenopus_tropicalis
ENSOPRG00000000885	-	79	96.552	ENSXCOG00000013494	-	80	96.552	Xiphophorus_couchianus
ENSOPRG00000000885	-	76	96.552	ENSXMAG00000007030	-	80	96.552	Xiphophorus_maculatus
ENSOPRG00000000885	-	76	89.655	ENSXMAG00000006321	smarca4a	92	89.655	Xiphophorus_maculatus