EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000001229 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 8844 bases
Position: chrGeneScaffold_1798:4861-13704
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000001151	RRM_1	PF00076.22	3.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000001248	RBM42-201	1416	-	ENSOPRP00000001151	471 (aa)	-	UPI0001777DE0

Gene Model

Click here to download ENSOPRG00000001229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000001229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000001229	RBM42	100	91.875	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSOPRG00000001229	RBM42	100	91.649	ENSAMEG00000000524	RBM42	100	93.528	Ailuropoda_melanoleuca
ENSOPRG00000001229	RBM42	100	92.662	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSOPRG00000001229	RBM42	100	91.614	ENSBTAG00000013440	RBM42	100	93.501	Bos_taurus
ENSOPRG00000001229	RBM42	100	92.437	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSOPRG00000001229	RBM42	100	85.744	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSOPRG00000001229	RBM42	100	90.776	ENSCHIG00000009518	RBM42	100	92.872	Capra_hircus
ENSOPRG00000001229	RBM42	100	91.423	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSOPRG00000001229	RBM42	81	93.005	ENSCAPG00000009566	RBM42	99	95.078	Cavia_aperea
ENSOPRG00000001229	RBM42	98	92.521	ENSCPOG00000012365	RBM42	99	94.340	Cavia_porcellus
ENSOPRG00000001229	RBM42	100	92.243	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSOPRG00000001229	RBM42	100	91.667	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSOPRG00000001229	RBM42	98	88.675	ENSCLAG00000012865	RBM42	99	94.130	Chinchilla_lanigera
ENSOPRG00000001229	RBM42	100	87.683	ENSCSAG00000004422	RBM42	100	89.562	Chlorocebus_sabaeus
ENSOPRG00000001229	RBM42	100	79.665	ENSCANG00000030272	RBM42	100	85.115	Colobus_angolensis_palliatus
ENSOPRG00000001229	RBM42	100	91.405	ENSCGRG00001018540	Rbm42	99	93.291	Cricetulus_griseus_chok1gshd
ENSOPRG00000001229	RBM42	100	87.683	ENSDNOG00000037397	RBM42	100	92.902	Dasypus_novemcinctus
ENSOPRG00000001229	RBM42	94	91.333	ENSDORG00000013001	Rbm42	99	92.872	Dipodomys_ordii
ENSOPRG00000001229	RBM42	72	88.406	ENSETEG00000007878	RBM42	74	88.406	Echinops_telfairi
ENSOPRG00000001229	RBM42	100	87.605	ENSEASG00005001074	RBM42	100	89.496	Equus_asinus_asinus
ENSOPRG00000001229	RBM42	100	87.605	ENSECAG00000018215	RBM42	100	89.496	Equus_caballus
ENSOPRG00000001229	RBM42	100	89.937	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSOPRG00000001229	RBM42	98	86.383	ENSFDAG00000007440	RBM42	99	92.693	Fukomys_damarensis
ENSOPRG00000001229	RBM42	100	91.875	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSOPRG00000001229	RBM42	98	90.150	ENSHGLG00000008418	RBM42	99	92.227	Heterocephalus_glaber_female
ENSOPRG00000001229	RBM42	98	90.150	ENSHGLG00100018667	RBM42	99	92.227	Heterocephalus_glaber_male
ENSOPRG00000001229	RBM42	100	91.807	ENSSTOG00000013050	RBM42	100	93.697	Ictidomys_tridecemlineatus
ENSOPRG00000001229	RBM42	100	87.605	ENSJJAG00000010421	Rbm42	99	92.647	Jaculus_jaculus
ENSOPRG00000001229	RBM42	98	87.794	ENSLAFG00000014993	RBM42	99	91.387	Loxodonta_africana
ENSOPRG00000001229	RBM42	100	91.667	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSOPRG00000001229	RBM42	100	91.667	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSOPRG00000001229	RBM42	100	91.667	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSOPRG00000001229	RBM42	100	91.667	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSOPRG00000001229	RBM42	100	92.662	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSOPRG00000001229	RBM42	100	90.776	ENSMOCG00000000405	Rbm42	99	92.662	Microtus_ochrogaster
ENSOPRG00000001229	RBM42	100	91.405	MGP_CAROLIEiJ_G0029536	Rbm42	99	93.082	Mus_caroli
ENSOPRG00000001229	RBM42	100	91.405	ENSMUSG00000036733	Rbm42	99	93.082	Mus_musculus
ENSOPRG00000001229	RBM42	100	87.841	MGP_PahariEiJ_G0012770	Rbm42	99	93.082	Mus_pahari
ENSOPRG00000001229	RBM42	100	91.405	MGP_SPRETEiJ_G0030632	Rbm42	99	93.082	Mus_spretus
ENSOPRG00000001229	RBM42	100	88.025	ENSMPUG00000006288	RBM42	100	89.916	Mustela_putorius_furo
ENSOPRG00000001229	RBM42	100	90.985	ENSMLUG00000011334	RBM42	100	92.872	Myotis_lucifugus
ENSOPRG00000001229	RBM42	100	92.034	ENSNGAG00000019698	Rbm42	99	93.291	Nannospalax_galili
ENSOPRG00000001229	RBM42	70	91.916	ENSNLEG00000011272	-	94	88.268	Nomascus_leucogenys
ENSOPRG00000001229	RBM42	100	92.034	ENSODEG00000013705	RBM42	99	93.920	Octodon_degus
ENSOPRG00000001229	RBM42	100	87.866	ENSOCUG00000003337	RBM42	100	89.121	Oryctolagus_cuniculus
ENSOPRG00000001229	RBM42	100	91.614	ENSOGAG00000004144	RBM42	100	93.501	Otolemur_garnettii
ENSOPRG00000001229	RBM42	98	86.022	ENSOARG00000004926	RBM42	98	88.421	Ovis_aries
ENSOPRG00000001229	RBM42	100	92.243	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSOPRG00000001229	RBM42	100	89.937	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSOPRG00000001229	RBM42	100	89.518	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSOPRG00000001229	RBM42	100	91.875	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSOPRG00000001229	RBM42	100	91.614	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSOPRG00000001229	RBM42	100	91.824	ENSPEMG00000012065	Rbm42	99	93.711	Peromyscus_maniculatus_bairdii
ENSOPRG00000001229	RBM42	100	86.598	ENSPPYG00000009871	RBM42	100	93.196	Pongo_abelii
ENSOPRG00000001229	RBM42	89	93.353	ENSPCAG00000013053	RBM42	89	93.353	Procavia_capensis
ENSOPRG00000001229	RBM42	100	92.662	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSOPRG00000001229	RBM42	70	92.793	ENSPCOG00000020672	RBM42	81	95.495	Propithecus_coquereli
ENSOPRG00000001229	RBM42	100	91.614	ENSPVAG00000012815	RBM42	100	93.501	Pteropus_vampyrus
ENSOPRG00000001229	RBM42	100	91.195	ENSRNOG00000024278	Rbm42	99	93.082	Rattus_norvegicus
ENSOPRG00000001229	RBM42	100	91.667	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSOPRG00000001229	RBM42	100	92.243	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSOPRG00000001229	RBM42	85	92.118	ENSSBOG00000030666	RBM42	100	94.828	Saimiri_boliviensis_boliviensis
ENSOPRG00000001229	RBM42	95	81.579	ENSSARG00000010724	RBM42	89	95.349	Sorex_araneus
ENSOPRG00000001229	RBM42	100	91.824	ENSSSCG00000002905	RBM42	100	94.130	Sus_scrofa
ENSOPRG00000001229	RBM42	100	92.243	ENSUAMG00000020711	RBM42	100	94.130	Ursus_americanus
ENSOPRG00000001229	RBM42	100	92.243	ENSUMAG00000020223	RBM42	100	94.130	Ursus_maritimus
ENSOPRG00000001229	RBM42	100	91.807	ENSVVUG00000015117	RBM42	100	93.697	Vulpes_vulpes