EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000001234 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 1063 bases
Position: chrGeneScaffold_5354:476093-477155
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000001132	RRM_1	PF00076.22	5.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000001228	-	552	-	ENSOPRP00000001132	183 (aa)	-	UPI00017A29B4

Gene Model

Click here to download ENSOPRG00000001234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000001234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000001234	-	85	39.752	ENSOPRG00000008286	SRSF5	55	40.123
ENSOPRG00000001234	-	69	72.656	ENSOPRG00000004234	SRSF9	54	70.079
ENSOPRG00000001234	-	56	63.107	ENSOPRG00000004745	-	59	62.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000001234	-	100	100.000	ENSG00000136450	SRSF1	99	100.000	Homo_sapiens
ENSOPRG00000001234	-	72	90.909	ENSAPOG00000002748	-	53	87.121	Acanthochromis_polyacanthus
ENSOPRG00000001234	-	72	91.304	ENSAPOG00000008542	-	55	89.130	Acanthochromis_polyacanthus
ENSOPRG00000001234	-	100	96.175	ENSAMEG00000002635	SRSF1	73	96.175	Ailuropoda_melanoleuca
ENSOPRG00000001234	-	72	90.909	ENSACIG00000008091	srsf1a	56	87.879	Amphilophus_citrinellus
ENSOPRG00000001234	-	72	91.667	ENSAOCG00000010671	-	56	88.636	Amphiprion_ocellaris
ENSOPRG00000001234	-	72	91.304	ENSAOCG00000000337	-	56	89.130	Amphiprion_ocellaris
ENSOPRG00000001234	-	72	91.304	ENSAPEG00000023352	-	55	89.130	Amphiprion_percula
ENSOPRG00000001234	-	72	91.667	ENSAPEG00000009915	-	56	88.636	Amphiprion_percula
ENSOPRG00000001234	-	75	86.957	ENSATEG00000021567	-	54	88.636	Anabas_testudineus
ENSOPRG00000001234	-	72	91.667	ENSATEG00000022403	-	53	88.636	Anabas_testudineus
ENSOPRG00000001234	-	100	98.361	ENSACAG00000005542	-	74	98.361	Anolis_carolinensis
ENSOPRG00000001234	-	100	98.907	ENSANAG00000020583	-	72	98.907	Aotus_nancymaae
ENSOPRG00000001234	-	72	77.922	ENSAMXG00000024373	-	71	76.129	Astyanax_mexicanus
ENSOPRG00000001234	-	94	89.831	ENSAMXG00000035996	srsf1a	54	91.241	Astyanax_mexicanus
ENSOPRG00000001234	-	100	100.000	ENSBTAG00000014766	SRSF1	74	100.000	Bos_taurus
ENSOPRG00000001234	-	100	98.907	ENSCJAG00000041713	-	72	98.907	Callithrix_jacchus
ENSOPRG00000001234	-	72	92.424	ENSCJAG00000008111	-	59	92.424	Callithrix_jacchus
ENSOPRG00000001234	-	100	98.907	ENSCAFG00000017430	SRSF1	72	98.907	Canis_familiaris
ENSOPRG00000001234	-	100	98.907	ENSCAFG00020025632	-	72	98.907	Canis_lupus_dingo
ENSOPRG00000001234	-	100	100.000	ENSCHIG00000010787	SRSF1	74	100.000	Capra_hircus
ENSOPRG00000001234	-	100	98.907	ENSTSYG00000013899	-	83	100.000	Carlito_syrichta
ENSOPRG00000001234	-	100	100.000	ENSCPOG00000032681	-	74	100.000	Cavia_porcellus
ENSOPRG00000001234	-	100	100.000	ENSCCAG00000029484	-	74	100.000	Cebus_capucinus
ENSOPRG00000001234	-	100	98.907	ENSCATG00000042294	-	88	98.693	Cercocebus_atys
ENSOPRG00000001234	-	100	100.000	ENSCLAG00000014707	-	74	100.000	Chinchilla_lanigera
ENSOPRG00000001234	-	100	98.361	ENSCSAG00000005642	-	72	98.361	Chlorocebus_sabaeus
ENSOPRG00000001234	-	100	100.000	ENSCHOG00000001899	SRSF1	74	100.000	Choloepus_hoffmanni
ENSOPRG00000001234	-	100	98.361	ENSCPBG00000009851	-	74	98.361	Chrysemys_picta_bellii
ENSOPRG00000001234	-	100	98.907	ENSCANG00000029726	-	83	98.693	Colobus_angolensis_palliatus
ENSOPRG00000001234	-	100	98.907	ENSCGRG00001000670	Srsf1	72	98.907	Cricetulus_griseus_chok1gshd
ENSOPRG00000001234	-	100	100.000	ENSCGRG00000005590	Srsf1	74	100.000	Cricetulus_griseus_crigri
ENSOPRG00000001234	-	72	90.370	ENSCSEG00000014272	-	54	90.370	Cynoglossus_semilaevis
ENSOPRG00000001234	-	72	80.952	ENSCSEG00000009973	-	56	79.592	Cynoglossus_semilaevis
ENSOPRG00000001234	-	72	92.481	ENSCVAG00000005458	-	60	90.909	Cyprinodon_variegatus
ENSOPRG00000001234	-	72	91.667	ENSCVAG00000018617	-	53	88.636	Cyprinodon_variegatus
ENSOPRG00000001234	-	72	86.620	ENSDARG00000057691	srsf1a	67	86.822	Danio_rerio
ENSOPRG00000001234	-	100	96.175	ENSDARG00000017843	srsf1b	74	96.175	Danio_rerio
ENSOPRG00000001234	-	100	98.907	ENSDNOG00000011737	-	72	98.907	Dasypus_novemcinctus
ENSOPRG00000001234	-	100	100.000	ENSDORG00000015082	Srsf1	74	100.000	Dipodomys_ordii
ENSOPRG00000001234	-	100	98.907	ENSEASG00005002922	-	72	98.907	Equus_asinus_asinus
ENSOPRG00000001234	-	100	100.000	ENSECAG00000016654	SRSF1	74	100.000	Equus_caballus
ENSOPRG00000001234	-	72	92.424	ENSELUG00000021646	srsf1a	52	87.121	Esox_lucius
ENSOPRG00000001234	-	100	98.907	ENSFCAG00000002250	-	72	98.907	Felis_catus
ENSOPRG00000001234	-	79	97.931	ENSFALG00000005062	-	57	97.931	Ficedula_albicollis
ENSOPRG00000001234	-	100	100.000	ENSFDAG00000010646	-	74	100.000	Fukomys_damarensis
ENSOPRG00000001234	-	72	91.667	ENSFHEG00000003174	srsf1a	56	88.636	Fundulus_heteroclitus
ENSOPRG00000001234	-	91	83.832	ENSGMOG00000014787	-	54	83.333	Gadus_morhua
ENSOPRG00000001234	-	100	98.361	ENSGALG00000005525	SRSF1	74	98.361	Gallus_gallus
ENSOPRG00000001234	-	72	84.848	ENSGACG00000020621	srsf1b	52	81.818	Gasterosteus_aculeatus
ENSOPRG00000001234	-	100	97.268	ENSGAGG00000022965	-	72	97.268	Gopherus_agassizii
ENSOPRG00000001234	-	100	98.907	ENSGGOG00000004386	SRSF1	88	98.693	Gorilla_gorilla
ENSOPRG00000001234	-	72	90.909	ENSHBUG00000016788	srsf1a	54	87.879	Haplochromis_burtoni
ENSOPRG00000001234	-	100	100.000	ENSHGLG00000000669	-	85	100.000	Heterocephalus_glaber_female
ENSOPRG00000001234	-	100	100.000	ENSHGLG00000000600	-	85	100.000	Heterocephalus_glaber_female
ENSOPRG00000001234	-	100	100.000	ENSHGLG00100016906	-	74	100.000	Heterocephalus_glaber_male
ENSOPRG00000001234	-	72	85.294	ENSHCOG00000018918	srsf1a	53	86.029	Hippocampus_comes
ENSOPRG00000001234	-	100	95.628	ENSIPUG00000008750	srsf1b	73	95.628	Ictalurus_punctatus
ENSOPRG00000001234	-	94	89.326	ENSIPUG00000017039	srsf1a	55	92.029	Ictalurus_punctatus
ENSOPRG00000001234	-	100	100.000	ENSSTOG00000000243	-	74	100.000	Ictidomys_tridecemlineatus
ENSOPRG00000001234	-	100	100.000	ENSJJAG00000000102	-	74	100.000	Jaculus_jaculus
ENSOPRG00000001234	-	72	91.667	ENSKMAG00000019232	srsf1a	53	86.364	Kryptolebias_marmoratus
ENSOPRG00000001234	-	72	90.152	ENSLBEG00000020864	-	56	87.121	Labrus_bergylta
ENSOPRG00000001234	-	72	87.407	ENSLBEG00000015294	-	54	88.889	Labrus_bergylta
ENSOPRG00000001234	-	100	96.175	ENSLOCG00000005994	srsf1a	74	96.175	Lepisosteus_oculatus
ENSOPRG00000001234	-	100	100.000	ENSLAFG00000025743	SRSF1	74	100.000	Loxodonta_africana
ENSOPRG00000001234	-	100	100.000	ENSMFAG00000040003	-	88	98.693	Macaca_fascicularis
ENSOPRG00000001234	-	100	95.628	ENSMMUG00000003260	-	72	95.628	Macaca_mulatta
ENSOPRG00000001234	-	100	98.907	ENSMMUG00000004725	SRSF1	72	98.907	Macaca_mulatta
ENSOPRG00000001234	-	100	95.628	ENSMNEG00000015983	-	88	96.732	Macaca_nemestrina
ENSOPRG00000001234	-	100	98.907	ENSMNEG00000027680	-	88	98.693	Macaca_nemestrina
ENSOPRG00000001234	-	100	92.350	ENSMLEG00000015243	-	72	92.350	Mandrillus_leucophaeus
ENSOPRG00000001234	-	100	100.000	ENSMLEG00000040509	SRSF1	74	100.000	Mandrillus_leucophaeus
ENSOPRG00000001234	-	72	90.152	ENSMAMG00000019687	-	53	87.121	Mastacembelus_armatus
ENSOPRG00000001234	-	72	94.697	ENSMAMG00000019691	-	54	90.152	Mastacembelus_armatus
ENSOPRG00000001234	-	72	91.667	ENSMAMG00000018454	-	53	88.636	Mastacembelus_armatus
ENSOPRG00000001234	-	100	100.000	ENSMAUG00000021845	Srsf1	74	100.000	Mesocricetus_auratus
ENSOPRG00000001234	-	100	98.907	ENSMICG00000013639	-	88	98.693	Microcebus_murinus
ENSOPRG00000001234	-	100	100.000	ENSMOCG00000001996	Srsf1	74	100.000	Microtus_ochrogaster
ENSOPRG00000001234	-	72	89.394	ENSMMOG00000014354	srsf1a	56	86.364	Mola_mola
ENSOPRG00000001234	-	72	90.909	ENSMALG00000017129	-	51	86.364	Monopterus_albus
ENSOPRG00000001234	-	100	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	89	100.000	Mus_caroli
ENSOPRG00000001234	-	100	100.000	ENSMUSG00000018379	Srsf1	88	100.000	Mus_musculus
ENSOPRG00000001234	-	100	100.000	MGP_PahariEiJ_G0018074	Srsf1	89	100.000	Mus_pahari
ENSOPRG00000001234	-	100	100.000	MGP_SPRETEiJ_G0017790	Srsf1	89	100.000	Mus_spretus
ENSOPRG00000001234	-	100	100.000	ENSMPUG00000015369	SRSF1	74	100.000	Mustela_putorius_furo
ENSOPRG00000001234	-	100	100.000	ENSMLUG00000011040	SRSF1	74	100.000	Myotis_lucifugus
ENSOPRG00000001234	-	75	88.406	ENSMLUG00000023995	-	52	87.879	Myotis_lucifugus
ENSOPRG00000001234	-	100	100.000	ENSNGAG00000011395	Srsf1	74	100.000	Nannospalax_galili
ENSOPRG00000001234	-	100	77.596	ENSNBRG00000008041	srsf1b	52	78.030	Neolamprologus_brichardi
ENSOPRG00000001234	-	100	98.907	ENSNLEG00000008088	-	88	98.693	Nomascus_leucogenys
ENSOPRG00000001234	-	100	100.000	ENSODEG00000011481	-	74	100.000	Octodon_degus
ENSOPRG00000001234	-	94	88.953	ENSONIG00000004860	-	54	88.636	Oreochromis_niloticus
ENSOPRG00000001234	-	72	90.909	ENSONIG00000013160	-	52	87.879	Oreochromis_niloticus
ENSOPRG00000001234	-	100	69.519	ENSOCUG00000010894	-	51	71.538	Oryctolagus_cuniculus
ENSOPRG00000001234	-	72	91.667	ENSORLG00000004580	srsf1a	53	88.636	Oryzias_latipes
ENSOPRG00000001234	-	72	91.667	ENSORLG00020009456	srsf1a	56	88.636	Oryzias_latipes_hni
ENSOPRG00000001234	-	72	91.667	ENSORLG00015014384	srsf1a	56	88.636	Oryzias_latipes_hsok
ENSOPRG00000001234	-	72	91.667	ENSOMEG00000004106	srsf1a	53	88.636	Oryzias_melastigma
ENSOPRG00000001234	-	100	100.000	ENSOGAG00000025950	-	74	100.000	Otolemur_garnettii
ENSOPRG00000001234	-	100	93.989	ENSOARG00000008323	SRSF1	73	93.989	Ovis_aries
ENSOPRG00000001234	-	100	100.000	ENSPPAG00000043403	-	88	98.693	Pan_paniscus
ENSOPRG00000001234	-	100	100.000	ENSPPRG00000004238	-	74	100.000	Panthera_pardus
ENSOPRG00000001234	-	100	98.907	ENSPTRG00000049077	SRSF1	88	98.693	Pan_troglodytes
ENSOPRG00000001234	-	77	96.429	ENSPANG00000030275	-	76	96.899	Papio_anubis
ENSOPRG00000001234	-	100	98.907	ENSPANG00000022305	-	88	98.693	Papio_anubis
ENSOPRG00000001234	-	100	95.082	ENSPKIG00000012857	srsf1b	73	95.082	Paramormyrops_kingsleyae
ENSOPRG00000001234	-	72	91.667	ENSPKIG00000007204	srsf1a	56	89.394	Paramormyrops_kingsleyae
ENSOPRG00000001234	-	100	98.361	ENSPSIG00000009000	-	78	97.902	Pelodiscus_sinensis
ENSOPRG00000001234	-	95	86.207	ENSPMGG00000005467	-	55	84.091	Periophthalmus_magnuspinnatus
ENSOPRG00000001234	-	72	87.591	ENSPMGG00000013112	-	57	90.511	Periophthalmus_magnuspinnatus
ENSOPRG00000001234	-	100	100.000	ENSPEMG00000021416	Srsf1	74	100.000	Peromyscus_maniculatus_bairdii
ENSOPRG00000001234	-	100	98.913	ENSPCIG00000006076	-	74	98.913	Phascolarctos_cinereus
ENSOPRG00000001234	-	74	92.647	ENSPLAG00000008416	srsf1b	54	90.909	Poecilia_latipinna
ENSOPRG00000001234	-	74	92.647	ENSPMEG00000002388	-	54	90.909	Poecilia_mexicana
ENSOPRG00000001234	-	72	91.667	ENSPREG00000009667	srsf1a	53	88.636	Poecilia_reticulata
ENSOPRG00000001234	-	100	100.000	ENSPPYG00000008240	SRSF1	74	100.000	Pongo_abelii
ENSOPRG00000001234	-	100	100.000	ENSPCAG00000005199	SRSF1	74	100.000	Procavia_capensis
ENSOPRG00000001234	-	100	100.000	ENSPCOG00000023654	-	88	98.693	Propithecus_coquereli
ENSOPRG00000001234	-	73	71.533	ENSPCOG00000025736	-	62	70.992	Propithecus_coquereli
ENSOPRG00000001234	-	94	91.860	ENSPNAG00000022241	srsf1a	53	87.121	Pygocentrus_nattereri
ENSOPRG00000001234	-	72	90.152	ENSPNAG00000014601	srsf1b	53	85.606	Pygocentrus_nattereri
ENSOPRG00000001234	-	100	100.000	ENSRNOG00000050323	Srsf1	74	100.000	Rattus_norvegicus
ENSOPRG00000001234	-	100	98.907	ENSRBIG00000034445	-	88	98.693	Rhinopithecus_bieti
ENSOPRG00000001234	-	100	100.000	ENSRROG00000041506	-	88	98.693	Rhinopithecus_roxellana
ENSOPRG00000001234	-	100	100.000	ENSSBOG00000025377	-	74	100.000	Saimiri_boliviensis_boliviensis
ENSOPRG00000001234	-	100	98.913	ENSSHAG00000002552	-	74	98.913	Sarcophilus_harrisii
ENSOPRG00000001234	-	100	95.628	ENSSFOG00015004800	srsf1a	73	95.628	Scleropages_formosus
ENSOPRG00000001234	-	72	89.394	ENSSMAG00000007018	-	53	85.606	Scophthalmus_maximus
ENSOPRG00000001234	-	92	86.286	ENSSMAG00000009719	-	55	84.892	Scophthalmus_maximus
ENSOPRG00000001234	-	72	90.152	ENSSDUG00000011303	-	56	87.121	Seriola_dumerili
ENSOPRG00000001234	-	100	74.194	ENSSDUG00000003929	-	55	80.741	Seriola_dumerili
ENSOPRG00000001234	-	72	90.152	ENSSLDG00000010543	-	53	87.121	Seriola_lalandi_dorsalis
ENSOPRG00000001234	-	93	73.099	ENSSLDG00000016895	-	51	81.967	Seriola_lalandi_dorsalis
ENSOPRG00000001234	-	72	81.203	ENSSLDG00000016868	-	50	81.203	Seriola_lalandi_dorsalis
ENSOPRG00000001234	-	100	97.268	ENSSPUG00000000804	-	72	97.268	Sphenodon_punctatus
ENSOPRG00000001234	-	72	87.500	ENSSPAG00000014152	-	56	86.111	Stegastes_partitus
ENSOPRG00000001234	-	72	92.424	ENSSPAG00000022562	-	53	89.394	Stegastes_partitus
ENSOPRG00000001234	-	100	100.000	ENSSSCG00000017626	-	74	100.000	Sus_scrofa
ENSOPRG00000001234	-	100	98.361	ENSTGUG00000008416	-	99	98.361	Taeniopygia_guttata
ENSOPRG00000001234	-	72	90.152	ENSTRUG00000003691	srsf1a	53	87.121	Takifugu_rubripes
ENSOPRG00000001234	-	72	90.152	ENSTNIG00000016223	srsf1a	53	87.121	Tetraodon_nigroviridis
ENSOPRG00000001234	-	100	100.000	ENSTTRG00000007310	SRSF1	100	100.000	Tursiops_truncatus
ENSOPRG00000001234	-	100	100.000	ENSUAMG00000009858	SRSF1	74	100.000	Ursus_americanus
ENSOPRG00000001234	-	100	98.907	ENSUMAG00000000455	-	72	98.907	Ursus_maritimus
ENSOPRG00000001234	-	100	99.454	ENSVPAG00000010094	SRSF1	74	99.454	Vicugna_pacos
ENSOPRG00000001234	-	100	98.907	ENSVVUG00000011882	-	72	98.907	Vulpes_vulpes
ENSOPRG00000001234	-	100	94.536	ENSXETG00000008954	srsf1	76	88.614	Xenopus_tropicalis
ENSOPRG00000001234	-	72	91.667	ENSXMAG00000011766	srsf1a	53	88.636	Xiphophorus_maculatus