EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000001397 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 125530 bases
Position: chrGeneScaffold_606:7885-133414
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000001315	XRN_N	PF03159.18	1.9e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000001426	-	2772	-	ENSOPRP00000001315	923 (aa)	-	UPI0001776DFD

Gene Model

Click here to download ENSOPRG00000001397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000001397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000001397	-	77	78.534	ENSG00000088930	XRN2	75	78.534	Homo_sapiens
ENSOPRG00000001397	-	63	71.579	ENSAPOG00000009818	xrn2	75	71.579	Acanthochromis_polyacanthus
ENSOPRG00000001397	-	77	79.058	ENSAMEG00000012581	XRN2	75	79.058	Ailuropoda_melanoleuca
ENSOPRG00000001397	-	63	72.632	ENSACIG00000015047	xrn2	62	72.632	Amphilophus_citrinellus
ENSOPRG00000001397	-	63	72.632	ENSAOCG00000023632	xrn2	75	72.632	Amphiprion_ocellaris
ENSOPRG00000001397	-	63	72.632	ENSAPEG00000014871	xrn2	75	72.632	Amphiprion_percula
ENSOPRG00000001397	-	63	72.105	ENSATEG00000001273	xrn2	72	72.105	Anabas_testudineus
ENSOPRG00000001397	-	77	75.263	ENSAPLG00000013869	XRN2	77	75.263	Anas_platyrhynchos
ENSOPRG00000001397	-	76	76.963	ENSACAG00000005565	XRN2	75	76.963	Anolis_carolinensis
ENSOPRG00000001397	-	77	78.534	ENSANAG00000020126	XRN2	75	78.534	Aotus_nancymaae
ENSOPRG00000001397	-	63	72.105	ENSACLG00000010522	xrn2	62	98.333	Astatotilapia_calliptera
ENSOPRG00000001397	-	63	73.684	ENSAMXG00000018301	xrn2	67	73.684	Astyanax_mexicanus
ENSOPRG00000001397	-	77	79.581	ENSBTAG00000011304	XRN2	78	79.581	Bos_taurus
ENSOPRG00000001397	-	54	55.497	WBGene00006964	xrn-2	51	55.497	Caenorhabditis_elegans
ENSOPRG00000001397	-	77	78.534	ENSCJAG00000005611	XRN2	75	78.534	Callithrix_jacchus
ENSOPRG00000001397	-	77	79.058	ENSCAFG00000005185	XRN2	75	79.058	Canis_familiaris
ENSOPRG00000001397	-	77	79.058	ENSCAFG00020027479	XRN2	75	79.058	Canis_lupus_dingo
ENSOPRG00000001397	-	77	79.058	ENSCHIG00000006921	XRN2	75	79.058	Capra_hircus
ENSOPRG00000001397	-	77	79.581	ENSTSYG00000008315	XRN2	75	79.581	Carlito_syrichta
ENSOPRG00000001397	-	73	69.780	ENSCAPG00000010773	XRN2	79	69.780	Cavia_aperea
ENSOPRG00000001397	-	77	79.058	ENSCPOG00000009407	XRN2	75	79.058	Cavia_porcellus
ENSOPRG00000001397	-	77	78.534	ENSCATG00000040350	XRN2	75	78.534	Cercocebus_atys
ENSOPRG00000001397	-	77	79.581	ENSCLAG00000013419	XRN2	75	79.581	Chinchilla_lanigera
ENSOPRG00000001397	-	77	78.534	ENSCSAG00000011094	XRN2	75	78.534	Chlorocebus_sabaeus
ENSOPRG00000001397	-	69	91.045	ENSCHOG00000013404	XRN2	70	91.045	Choloepus_hoffmanni
ENSOPRG00000001397	-	77	76.963	ENSCPBG00000023533	XRN2	77	76.963	Chrysemys_picta_bellii
ENSOPRG00000001397	-	77	78.534	ENSCANG00000040240	XRN2	75	78.534	Colobus_angolensis_palliatus
ENSOPRG00000001397	-	75	79.058	ENSCGRG00001010676	Xrn2	74	79.058	Cricetulus_griseus_chok1gshd
ENSOPRG00000001397	-	77	79.058	ENSCGRG00000006378	Xrn2	77	79.058	Cricetulus_griseus_crigri
ENSOPRG00000001397	-	63	71.579	ENSCVAG00000018999	xrn2	66	71.579	Cyprinodon_variegatus
ENSOPRG00000001397	-	63	74.211	ENSDARG00000101900	xrn2	62	74.211	Danio_rerio
ENSOPRG00000001397	-	77	78.534	ENSDNOG00000001895	XRN2	75	78.534	Dasypus_novemcinctus
ENSOPRG00000001397	-	77	79.058	ENSDORG00000005434	Xrn2	75	79.058	Dipodomys_ordii
ENSOPRG00000001397	-	68	77.727	ENSETEG00000001740	XRN2	66	77.727	Echinops_telfairi
ENSOPRG00000001397	-	55	69.634	ENSEBUG00000016136	xrn2	67	69.634	Eptatretus_burgeri
ENSOPRG00000001397	-	77	79.058	ENSEASG00005002484	XRN2	75	79.058	Equus_asinus_asinus
ENSOPRG00000001397	-	73	90.476	ENSECAG00000018988	XRN2	66	97.260	Equus_caballus
ENSOPRG00000001397	-	52	98.630	ENSEEUG00000009265	XRN2	51	98.630	Erinaceus_europaeus
ENSOPRG00000001397	-	63	73.158	ENSELUG00000000552	xrn2	76	73.158	Esox_lucius
ENSOPRG00000001397	-	77	79.058	ENSFCAG00000007970	XRN2	78	79.058	Felis_catus
ENSOPRG00000001397	-	77	75.263	ENSFALG00000004508	XRN2	75	75.263	Ficedula_albicollis
ENSOPRG00000001397	-	77	79.581	ENSFDAG00000016311	XRN2	75	79.581	Fukomys_damarensis
ENSOPRG00000001397	-	63	72.105	ENSGMOG00000013436	xrn2	70	72.105	Gadus_morhua
ENSOPRG00000001397	-	77	75.263	ENSGALG00000008372	XRN2	75	75.263	Gallus_gallus
ENSOPRG00000001397	-	63	72.105	ENSGAFG00000014284	xrn2	67	72.105	Gambusia_affinis
ENSOPRG00000001397	-	63	72.105	ENSGACG00000011870	xrn2	69	72.105	Gasterosteus_aculeatus
ENSOPRG00000001397	-	77	76.963	ENSGAGG00000004884	XRN2	75	76.963	Gopherus_agassizii
ENSOPRG00000001397	-	77	78.534	ENSGGOG00000013738	XRN2	75	78.534	Gorilla_gorilla
ENSOPRG00000001397	-	77	79.581	ENSHGLG00000014831	XRN2	76	79.581	Heterocephalus_glaber_female
ENSOPRG00000001397	-	77	79.581	ENSHGLG00100013130	XRN2	76	79.581	Heterocephalus_glaber_male
ENSOPRG00000001397	-	63	72.105	ENSHCOG00000011994	xrn2	75	72.105	Hippocampus_comes
ENSOPRG00000001397	-	63	73.158	ENSIPUG00000006639	xrn2	61	73.158	Ictalurus_punctatus
ENSOPRG00000001397	-	77	78.534	ENSSTOG00000000589	XRN2	75	78.534	Ictidomys_tridecemlineatus
ENSOPRG00000001397	-	77	79.058	ENSJJAG00000022128	Xrn2	75	79.058	Jaculus_jaculus
ENSOPRG00000001397	-	73	73.158	ENSLACG00000008307	XRN2	74	73.158	Latimeria_chalumnae
ENSOPRG00000001397	-	77	75.789	ENSLOCG00000016874	xrn2	75	75.789	Lepisosteus_oculatus
ENSOPRG00000001397	-	77	79.058	ENSLAFG00000014624	XRN2	75	79.058	Loxodonta_africana
ENSOPRG00000001397	-	64	97.260	ENSMFAG00000038122	XRN2	64	97.260	Macaca_fascicularis
ENSOPRG00000001397	-	77	78.534	ENSMMUG00000011405	XRN2	75	78.534	Macaca_mulatta
ENSOPRG00000001397	-	64	97.260	ENSMNEG00000040626	XRN2	64	97.260	Macaca_nemestrina
ENSOPRG00000001397	-	77	78.534	ENSMLEG00000041897	XRN2	75	78.534	Mandrillus_leucophaeus
ENSOPRG00000001397	-	63	72.632	ENSMAMG00000008633	xrn2	73	72.632	Mastacembelus_armatus
ENSOPRG00000001397	-	63	72.105	ENSMZEG00005022362	xrn2	66	72.105	Maylandia_zebra
ENSOPRG00000001397	-	77	74.737	ENSMGAG00000003196	XRN2	75	74.737	Meleagris_gallopavo
ENSOPRG00000001397	-	77	78.534	ENSMAUG00000021842	Xrn2	75	78.534	Mesocricetus_auratus
ENSOPRG00000001397	-	77	79.058	ENSMICG00000008126	XRN2	76	79.058	Microcebus_murinus
ENSOPRG00000001397	-	77	78.534	ENSMOCG00000012588	Xrn2	75	78.534	Microtus_ochrogaster
ENSOPRG00000001397	-	63	73.158	ENSMMOG00000017576	xrn2	65	73.158	Mola_mola
ENSOPRG00000001397	-	77	78.010	ENSMODG00000006163	XRN2	75	78.010	Monodelphis_domestica
ENSOPRG00000001397	-	63	71.579	ENSMALG00000011355	xrn2	66	71.579	Monopterus_albus
ENSOPRG00000001397	-	77	79.058	MGP_CAROLIEiJ_G0024400	Xrn2	75	79.058	Mus_caroli
ENSOPRG00000001397	-	77	79.058	ENSMUSG00000027433	Xrn2	75	79.058	Mus_musculus
ENSOPRG00000001397	-	77	78.947	MGP_PahariEiJ_G0025843	Xrn2	75	78.947	Mus_pahari
ENSOPRG00000001397	-	77	79.058	MGP_SPRETEiJ_G0025318	Xrn2	79	100.000	Mus_spretus
ENSOPRG00000001397	-	77	79.058	ENSMPUG00000001198	XRN2	70	79.058	Mustela_putorius_furo
ENSOPRG00000001397	-	77	78.534	ENSMLUG00000001536	XRN2	75	78.534	Myotis_lucifugus
ENSOPRG00000001397	-	77	79.058	ENSNGAG00000018138	Xrn2	75	79.058	Nannospalax_galili
ENSOPRG00000001397	-	63	72.105	ENSNBRG00000008062	xrn2	62	98.333	Neolamprologus_brichardi
ENSOPRG00000001397	-	77	78.534	ENSNLEG00000009991	XRN2	76	78.534	Nomascus_leucogenys
ENSOPRG00000001397	-	77	79.058	ENSODEG00000010745	-	75	79.058	Octodon_degus
ENSOPRG00000001397	-	76	74.346	ENSODEG00000000860	-	75	74.346	Octodon_degus
ENSOPRG00000001397	-	77	72.105	ENSONIG00000018720	xrn2	75	71.354	Oreochromis_niloticus
ENSOPRG00000001397	-	77	78.010	ENSOANG00000015673	XRN2	75	78.010	Ornithorhynchus_anatinus
ENSOPRG00000001397	-	77	79.058	ENSOCUG00000013468	XRN2	75	79.058	Oryctolagus_cuniculus
ENSOPRG00000001397	-	75	72.105	ENSORLG00000017213	xrn2	75	72.105	Oryzias_latipes
ENSOPRG00000001397	-	63	72.105	ENSORLG00020001824	xrn2	61	72.105	Oryzias_latipes_hni
ENSOPRG00000001397	-	75	72.632	ENSORLG00015019747	xrn2	75	72.632	Oryzias_latipes_hsok
ENSOPRG00000001397	-	63	71.579	ENSOMEG00000019820	xrn2	60	71.579	Oryzias_melastigma
ENSOPRG00000001397	-	77	77.895	ENSOGAG00000001068	XRN2	75	77.895	Otolemur_garnettii
ENSOPRG00000001397	-	77	79.058	ENSOARG00000004443	XRN2	77	79.058	Ovis_aries
ENSOPRG00000001397	-	77	78.534	ENSPPAG00000033549	XRN2	75	78.534	Pan_paniscus
ENSOPRG00000001397	-	77	79.058	ENSPPRG00000008732	XRN2	75	79.058	Panthera_pardus
ENSOPRG00000001397	-	77	79.058	ENSPTIG00000015683	XRN2	75	79.058	Panthera_tigris_altaica
ENSOPRG00000001397	-	77	78.534	ENSPTRG00000013308	XRN2	75	78.534	Pan_troglodytes
ENSOPRG00000001397	-	77	78.534	ENSPANG00000018088	XRN2	75	78.534	Papio_anubis
ENSOPRG00000001397	-	63	74.737	ENSPKIG00000016889	xrn2	75	74.737	Paramormyrops_kingsleyae
ENSOPRG00000001397	-	60	74.691	ENSPSIG00000014666	XRN2	72	74.691	Pelodiscus_sinensis
ENSOPRG00000001397	-	77	78.010	ENSPEMG00000000111	Xrn2	75	78.010	Peromyscus_maniculatus_bairdii
ENSOPRG00000001397	-	63	71.053	ENSPFOG00000004182	xrn2	75	71.053	Poecilia_formosa
ENSOPRG00000001397	-	63	71.579	ENSPLAG00000007351	xrn2	66	71.579	Poecilia_latipinna
ENSOPRG00000001397	-	60	69.136	ENSPMEG00000011798	xrn2	76	69.136	Poecilia_mexicana
ENSOPRG00000001397	-	63	72.105	ENSPREG00000012452	xrn2	66	72.105	Poecilia_reticulata
ENSOPRG00000001397	-	77	78.534	ENSPPYG00000010755	XRN2	75	78.534	Pongo_abelii
ENSOPRG00000001397	-	77	78.534	ENSPCAG00000011191	XRN2	75	78.534	Procavia_capensis
ENSOPRG00000001397	-	68	100.000	ENSPCOG00000016468	XRN2	69	100.000	Propithecus_coquereli
ENSOPRG00000001397	-	67	89.431	ENSPVAG00000004596	XRN2	65	89.431	Pteropus_vampyrus
ENSOPRG00000001397	-	63	72.105	ENSPNYG00000001765	xrn2	66	72.105	Pundamilia_nyererei
ENSOPRG00000001397	-	68	73.684	ENSPNAG00000010956	xrn2	66	73.684	Pygocentrus_nattereri
ENSOPRG00000001397	-	77	79.058	ENSRNOG00000011785	Xrn2	75	79.058	Rattus_norvegicus
ENSOPRG00000001397	-	63	78.534	ENSRBIG00000036193	XRN2	71	78.534	Rhinopithecus_bieti
ENSOPRG00000001397	-	77	78.534	ENSRROG00000044400	XRN2	68	78.534	Rhinopithecus_roxellana
ENSOPRG00000001397	-	77	78.534	ENSSBOG00000021014	XRN2	75	78.534	Saimiri_boliviensis_boliviensis
ENSOPRG00000001397	-	63	73.684	ENSSFOG00015001091	xrn2	62	73.684	Scleropages_formosus
ENSOPRG00000001397	-	63	73.158	ENSSMAG00000007834	xrn2	76	73.158	Scophthalmus_maximus
ENSOPRG00000001397	-	63	72.632	ENSSDUG00000012802	xrn2	67	72.632	Seriola_dumerili
ENSOPRG00000001397	-	63	72.632	ENSSLDG00000021273	xrn2	66	72.632	Seriola_lalandi_dorsalis
ENSOPRG00000001397	-	68	75.916	ENSSPUG00000005485	XRN2	65	75.916	Sphenodon_punctatus
ENSOPRG00000001397	-	63	72.632	ENSSPAG00000016027	xrn2	75	72.632	Stegastes_partitus
ENSOPRG00000001397	-	71	86.842	ENSSSCG00000007109	XRN2	69	86.842	Sus_scrofa
ENSOPRG00000001397	-	77	69.792	ENSTGUG00000007535	XRN2	75	69.792	Taeniopygia_guttata
ENSOPRG00000001397	-	63	73.158	ENSTRUG00000015489	xrn2	76	73.158	Takifugu_rubripes
ENSOPRG00000001397	-	77	71.875	ENSTNIG00000010712	xrn2	75	71.875	Tetraodon_nigroviridis
ENSOPRG00000001397	-	77	79.058	ENSTBEG00000004119	XRN2	75	79.058	Tupaia_belangeri
ENSOPRG00000001397	-	70	78.534	ENSTTRG00000009087	XRN2	68	78.534	Tursiops_truncatus
ENSOPRG00000001397	-	71	92.857	ENSUAMG00000024634	XRN2	69	92.857	Ursus_americanus
ENSOPRG00000001397	-	77	79.058	ENSUMAG00000004012	XRN2	76	79.058	Ursus_maritimus
ENSOPRG00000001397	-	56	95.890	ENSVPAG00000010694	XRN2	55	95.890	Vicugna_pacos
ENSOPRG00000001397	-	77	79.058	ENSVVUG00000012178	XRN2	75	79.058	Vulpes_vulpes
ENSOPRG00000001397	-	77	75.916	ENSXETG00000023501	xrn2	75	75.916	Xenopus_tropicalis
ENSOPRG00000001397	-	63	72.105	ENSXMAG00000000242	xrn2	75	72.105	Xiphophorus_maculatus