EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000001473 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 6366 bases
Position: chrGeneScaffold_3426:37931-44296
Accession: 101524157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000001344	zf-C2H2	PF00096.26	3.2e-27	1	6
ENSOPRP00000001344	zf-C2H2	PF00096.26	3.2e-27	2	6
ENSOPRP00000001344	zf-C2H2	PF00096.26	3.2e-27	3	6
ENSOPRP00000001344	zf-C2H2	PF00096.26	3.2e-27	4	6
ENSOPRP00000001344	zf-C2H2	PF00096.26	3.2e-27	5	6
ENSOPRP00000001344	zf-C2H2	PF00096.26	3.2e-27	6	6
ENSOPRP00000001344	zf-met	PF12874.7	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000001459	GFI1-201	1269	XM_004582052	ENSOPRP00000001344	422 (aa)	XP_004582109	UPI0001777690

Gene Model

Click here to download ENSOPRG00000001473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000001473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000001473	GFI1	53	46.309	ENSOPRG00000007399	ZSCAN22	55	46.309

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000001473	GFI1	100	91.232	ENSG00000162676	GFI1	100	91.232	Homo_sapiens
ENSOPRG00000001473	GFI1	100	63.256	ENSAPOG00000015189	gfi1ab	100	63.084	Acanthochromis_polyacanthus
ENSOPRG00000001473	GFI1	100	61.972	ENSACIG00000016354	gfi1ab	100	62.617	Amphilophus_citrinellus
ENSOPRG00000001473	GFI1	100	55.140	ENSAOCG00000008339	gfi1ab	100	54.907	Amphiprion_ocellaris
ENSOPRG00000001473	GFI1	100	63.721	ENSAPEG00000023870	gfi1ab	100	63.488	Amphiprion_percula
ENSOPRG00000001473	GFI1	100	59.722	ENSATEG00000009167	gfi1ab	89	59.491	Anabas_testudineus
ENSOPRG00000001473	GFI1	87	76.011	ENSAPLG00000015700	GFI1	99	75.741	Anas_platyrhynchos
ENSOPRG00000001473	GFI1	100	70.413	ENSACAG00000004498	GFI1	100	70.901	Anolis_carolinensis
ENSOPRG00000001473	GFI1	100	90.758	ENSANAG00000019656	GFI1	100	90.758	Aotus_nancymaae
ENSOPRG00000001473	GFI1	100	63.934	ENSACLG00000026458	gfi1ab	93	63.232	Astatotilapia_calliptera
ENSOPRG00000001473	GFI1	100	59.589	ENSAMXG00000039600	gfi1ab	100	59.132	Astyanax_mexicanus
ENSOPRG00000001473	GFI1	75	58.438	ENSAMXG00000006669	GFI1	59	87.568	Astyanax_mexicanus
ENSOPRG00000001473	GFI1	100	90.758	ENSBTAG00000016723	GFI1	100	90.758	Bos_taurus
ENSOPRG00000001473	GFI1	100	89.100	ENSCJAG00000017609	GFI1	100	89.100	Callithrix_jacchus
ENSOPRG00000001473	GFI1	100	91.232	ENSCAFG00000020155	GFI1	100	91.232	Canis_familiaris
ENSOPRG00000001473	GFI1	100	91.232	ENSCAFG00020013371	GFI1	88	91.232	Canis_lupus_dingo
ENSOPRG00000001473	GFI1	100	90.758	ENSCHIG00000016135	GFI1	100	90.758	Capra_hircus
ENSOPRG00000001473	GFI1	100	93.128	ENSCPOG00000011727	GFI1	100	92.891	Cavia_porcellus
ENSOPRG00000001473	GFI1	100	90.284	ENSCCAG00000036072	GFI1	100	90.284	Cebus_capucinus
ENSOPRG00000001473	GFI1	100	90.758	ENSCATG00000037873	GFI1	100	90.758	Cercocebus_atys
ENSOPRG00000001473	GFI1	100	86.256	ENSCLAG00000005915	GFI1	100	86.175	Chinchilla_lanigera
ENSOPRG00000001473	GFI1	86	89.011	ENSCSAG00000001469	GFI1	100	89.011	Chlorocebus_sabaeus
ENSOPRG00000001473	GFI1	100	90.521	ENSCANG00000034077	GFI1	100	90.521	Colobus_angolensis_palliatus
ENSOPRG00000001473	GFI1	100	86.019	ENSCGRG00001015432	Gfi1	100	86.019	Cricetulus_griseus_chok1gshd
ENSOPRG00000001473	GFI1	100	57.798	ENSCSEG00000017729	GFI1	100	57.339	Cynoglossus_semilaevis
ENSOPRG00000001473	GFI1	100	62.093	ENSCVAG00000011828	gfi1ab	100	61.163	Cyprinodon_variegatus
ENSOPRG00000001473	GFI1	100	58.042	ENSCVAG00000004930	GFI1	100	59.770	Cyprinodon_variegatus
ENSOPRG00000001473	GFI1	100	64.486	ENSDARG00000044457	gfi1ab	100	65.187	Danio_rerio
ENSOPRG00000001473	GFI1	100	88.889	ENSDNOG00000000782	GFI1	97	90.071	Dasypus_novemcinctus
ENSOPRG00000001473	GFI1	100	83.529	ENSEBUG00000008075	gfi1ab	57	83.529	Eptatretus_burgeri
ENSOPRG00000001473	GFI1	100	89.598	ENSEASG00005015509	GFI1	86	90.307	Equus_asinus_asinus
ENSOPRG00000001473	GFI1	92	83.805	ENSECAG00000006647	GFI1	92	84.576	Equus_caballus
ENSOPRG00000001473	GFI1	100	83.886	ENSEEUG00000000198	GFI1	100	84.360	Erinaceus_europaeus
ENSOPRG00000001473	GFI1	100	59.155	ENSELUG00000019033	GFI1	100	58.451	Esox_lucius
ENSOPRG00000001473	GFI1	100	62.963	ENSELUG00000003015	gfi1ab	99	62.963	Esox_lucius
ENSOPRG00000001473	GFI1	100	91.943	ENSFCAG00000005914	GFI1	100	91.943	Felis_catus
ENSOPRG00000001473	GFI1	100	58.237	ENSFHEG00000000341	GFI1	100	59.954	Fundulus_heteroclitus
ENSOPRG00000001473	GFI1	100	62.005	ENSFHEG00000010997	gfi1ab	100	60.606	Fundulus_heteroclitus
ENSOPRG00000001473	GFI1	100	61.395	ENSGMOG00000007737	gfi1ab	100	61.395	Gadus_morhua
ENSOPRG00000001473	GFI1	100	73.550	ENSGALG00000043650	GFI1	100	73.318	Gallus_gallus
ENSOPRG00000001473	GFI1	100	62.238	ENSGAFG00000016637	gfi1ab	100	60.970	Gambusia_affinis
ENSOPRG00000001473	GFI1	100	57.373	ENSGAFG00000018063	GFI1	100	60.092	Gambusia_affinis
ENSOPRG00000001473	GFI1	100	64.000	ENSGACG00000004257	gfi1ab	97	63.294	Gasterosteus_aculeatus
ENSOPRG00000001473	GFI1	100	91.232	ENSGGOG00000005320	GFI1	100	91.232	Gorilla_gorilla
ENSOPRG00000001473	GFI1	100	64.000	ENSHBUG00000011969	gfi1ab	100	63.059	Haplochromis_burtoni
ENSOPRG00000001473	GFI1	100	90.995	ENSHGLG00000008020	GFI1	100	90.521	Heterocephalus_glaber_female
ENSOPRG00000001473	GFI1	100	90.995	ENSHGLG00100000610	GFI1	100	90.521	Heterocephalus_glaber_male
ENSOPRG00000001473	GFI1	100	57.604	ENSHCOG00000019555	GFI1	100	57.944	Hippocampus_comes
ENSOPRG00000001473	GFI1	100	52.902	ENSHCOG00000008590	gfi1ab	100	51.327	Hippocampus_comes
ENSOPRG00000001473	GFI1	100	56.613	ENSIPUG00000013414	GFI1	100	56.845	Ictalurus_punctatus
ENSOPRG00000001473	GFI1	100	61.882	ENSIPUG00000010071	gfi1ab	87	62.207	Ictalurus_punctatus
ENSOPRG00000001473	GFI1	100	89.810	ENSSTOG00000014583	GFI1	100	89.810	Ictidomys_tridecemlineatus
ENSOPRG00000001473	GFI1	100	62.529	ENSKMAG00000003810	gfi1ab	100	62.295	Kryptolebias_marmoratus
ENSOPRG00000001473	GFI1	100	61.785	ENSLBEG00000027776	gfi1ab	100	61.556	Labrus_bergylta
ENSOPRG00000001473	GFI1	100	68.458	ENSLACG00000013362	GFI1	98	68.458	Latimeria_chalumnae
ENSOPRG00000001473	GFI1	99	77.222	ENSLACG00000017590	-	99	77.222	Latimeria_chalumnae
ENSOPRG00000001473	GFI1	100	66.975	ENSLOCG00000004711	gfi1ab	100	67.436	Lepisosteus_oculatus
ENSOPRG00000001473	GFI1	100	84.360	ENSLAFG00000018346	GFI1	100	84.360	Loxodonta_africana
ENSOPRG00000001473	GFI1	100	90.758	ENSMFAG00000045801	GFI1	100	90.758	Macaca_fascicularis
ENSOPRG00000001473	GFI1	100	90.758	ENSMNEG00000036338	GFI1	100	90.758	Macaca_nemestrina
ENSOPRG00000001473	GFI1	100	90.758	ENSMLEG00000036181	GFI1	100	90.758	Mandrillus_leucophaeus
ENSOPRG00000001473	GFI1	100	63.403	ENSMAMG00000008125	gfi1ab	100	62.937	Mastacembelus_armatus
ENSOPRG00000001473	GFI1	100	64.169	ENSMZEG00005009895	gfi1ab	100	63.466	Maylandia_zebra
ENSOPRG00000001473	GFI1	87	76.757	ENSMGAG00000008187	GFI1	99	76.486	Meleagris_gallopavo
ENSOPRG00000001473	GFI1	100	91.469	ENSMICG00000047208	GFI1	100	91.469	Microcebus_murinus
ENSOPRG00000001473	GFI1	100	59.629	ENSMMOG00000005556	gfi1ab	100	59.397	Mola_mola
ENSOPRG00000001473	GFI1	100	78.261	ENSMODG00000011802	GFI1	100	78.490	Monodelphis_domestica
ENSOPRG00000001473	GFI1	100	61.305	ENSMALG00000014672	gfi1ab	100	60.748	Monopterus_albus
ENSOPRG00000001473	GFI1	100	86.761	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSOPRG00000001473	GFI1	100	86.525	ENSMUSG00000029275	Gfi1	100	86.525	Mus_musculus
ENSOPRG00000001473	GFI1	100	86.052	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSOPRG00000001473	GFI1	100	86.052	MGP_SPRETEiJ_G0028507	Gfi1	100	86.052	Mus_spretus
ENSOPRG00000001473	GFI1	100	81.991	ENSMPUG00000004178	GFI1	97	81.991	Mustela_putorius_furo
ENSOPRG00000001473	GFI1	100	87.264	ENSMLUG00000015191	GFI1	97	87.264	Myotis_lucifugus
ENSOPRG00000001473	GFI1	100	62.212	ENSNBRG00000015774	gfi1ab	100	61.521	Neolamprologus_brichardi
ENSOPRG00000001473	GFI1	93	89.258	ENSNLEG00000010470	GFI1	97	89.258	Nomascus_leucogenys
ENSOPRG00000001473	GFI1	100	63.700	ENSONIG00000019246	gfi1ab	100	62.998	Oreochromis_niloticus
ENSOPRG00000001473	GFI1	86	89.891	ENSOCUG00000023553	GFI1	93	91.530	Oryctolagus_cuniculus
ENSOPRG00000001473	GFI1	100	62.353	ENSORLG00000013806	gfi1ab	100	61.882	Oryzias_latipes
ENSOPRG00000001473	GFI1	100	58.605	ENSORLG00000005060	GFI1	100	59.908	Oryzias_latipes
ENSOPRG00000001473	GFI1	100	62.118	ENSORLG00020001602	gfi1ab	100	61.647	Oryzias_latipes_hni
ENSOPRG00000001473	GFI1	100	53.176	ENSORLG00020002817	GFI1	90	60.856	Oryzias_latipes_hni
ENSOPRG00000001473	GFI1	100	59.579	ENSORLG00015006070	GFI1	100	58.411	Oryzias_latipes_hsok
ENSOPRG00000001473	GFI1	100	57.845	ENSOMEG00000016722	GFI1	100	58.275	Oryzias_melastigma
ENSOPRG00000001473	GFI1	100	76.596	ENSOGAG00000027913	GFI1	100	79.384	Otolemur_garnettii
ENSOPRG00000001473	GFI1	69	97.143	ENSOARG00000016329	GFI1	94	97.143	Ovis_aries
ENSOPRG00000001473	GFI1	100	77.962	ENSPPAG00000042186	GFI1	100	70.853	Pan_paniscus
ENSOPRG00000001473	GFI1	100	91.943	ENSPPRG00000007521	GFI1	100	91.943	Panthera_pardus
ENSOPRG00000001473	GFI1	100	90.995	ENSPTRG00000043053	GFI1	100	90.995	Pan_troglodytes
ENSOPRG00000001473	GFI1	100	90.758	ENSPANG00000016433	GFI1	100	90.758	Papio_anubis
ENSOPRG00000001473	GFI1	100	63.825	ENSPKIG00000004263	GFI1	100	64.286	Paramormyrops_kingsleyae
ENSOPRG00000001473	GFI1	88	75.335	ENSPSIG00000008734	GFI1	97	75.335	Pelodiscus_sinensis
ENSOPRG00000001473	GFI1	100	60.993	ENSPMGG00000012546	gfi1ab	100	59.674	Periophthalmus_magnuspinnatus
ENSOPRG00000001473	GFI1	100	79.767	ENSPCIG00000013728	GFI1	100	80.233	Phascolarctos_cinereus
ENSOPRG00000001473	GFI1	100	62.588	ENSPFOG00000023214	gfi1ab	100	62.353	Poecilia_formosa
ENSOPRG00000001473	GFI1	100	60.698	ENSPLAG00000005376	GFI1	91	60.930	Poecilia_latipinna
ENSOPRG00000001473	GFI1	100	62.588	ENSPLAG00000010879	gfi1ab	100	62.353	Poecilia_latipinna
ENSOPRG00000001473	GFI1	100	60.606	ENSPMEG00000019299	GFI1	100	60.698	Poecilia_mexicana
ENSOPRG00000001473	GFI1	100	63.059	ENSPMEG00000013694	gfi1ab	100	62.588	Poecilia_mexicana
ENSOPRG00000001473	GFI1	100	54.028	ENSPREG00000007997	GFI1	100	52.928	Poecilia_reticulata
ENSOPRG00000001473	GFI1	100	62.824	ENSPREG00000014097	gfi1ab	100	62.588	Poecilia_reticulata
ENSOPRG00000001473	GFI1	100	77.412	ENSPCAG00000011020	GFI1	100	78.353	Procavia_capensis
ENSOPRG00000001473	GFI1	100	90.758	ENSPCOG00000020540	GFI1	100	90.758	Propithecus_coquereli
ENSOPRG00000001473	GFI1	100	87.441	ENSPVAG00000006928	GFI1	100	87.915	Pteropus_vampyrus
ENSOPRG00000001473	GFI1	100	63.934	ENSPNYG00000021183	gfi1ab	100	63.232	Pundamilia_nyererei
ENSOPRG00000001473	GFI1	100	61.176	ENSPNAG00000027258	gfi1ab	100	60.235	Pygocentrus_nattereri
ENSOPRG00000001473	GFI1	57	50.209	ENSPNAG00000014299	-	72	52.193	Pygocentrus_nattereri
ENSOPRG00000001473	GFI1	100	55.399	ENSPNAG00000028014	GFI1	100	54.930	Pygocentrus_nattereri
ENSOPRG00000001473	GFI1	100	86.998	ENSRNOG00000002042	Gfi1	100	86.998	Rattus_norvegicus
ENSOPRG00000001473	GFI1	100	90.758	ENSRBIG00000036467	GFI1	100	90.758	Rhinopithecus_bieti
ENSOPRG00000001473	GFI1	100	90.758	ENSRROG00000031687	GFI1	100	90.758	Rhinopithecus_roxellana
ENSOPRG00000001473	GFI1	100	90.284	ENSSBOG00000031300	GFI1	100	90.284	Saimiri_boliviensis_boliviensis
ENSOPRG00000001473	GFI1	100	66.589	ENSSFOG00015020295	gfi1	100	66.357	Scleropages_formosus
ENSOPRG00000001473	GFI1	100	62.903	ENSSMAG00000002782	gfi1ab	100	62.037	Scophthalmus_maximus
ENSOPRG00000001473	GFI1	100	63.059	ENSSDUG00000022410	gfi1ab	100	63.059	Seriola_dumerili
ENSOPRG00000001473	GFI1	100	63.294	ENSSLDG00000020163	gfi1ab	100	63.294	Seriola_lalandi_dorsalis
ENSOPRG00000001473	GFI1	86	67.722	ENSSPAG00000009140	gfi1ab	100	67.937	Stegastes_partitus
ENSOPRG00000001473	GFI1	100	89.810	ENSSSCG00000006902	GFI1	100	90.521	Sus_scrofa
ENSOPRG00000001473	GFI1	87	76.630	ENSTGUG00000006060	GFI1	99	76.359	Taeniopygia_guttata
ENSOPRG00000001473	GFI1	100	59.859	ENSTRUG00000000415	gfi1ab	100	59.390	Takifugu_rubripes
ENSOPRG00000001473	GFI1	100	59.434	ENSTNIG00000000651	gfi1ab	97	60.142	Tetraodon_nigroviridis
ENSOPRG00000001473	GFI1	100	90.284	ENSTTRG00000000082	GFI1	100	90.284	Tursiops_truncatus
ENSOPRG00000001473	GFI1	100	86.525	ENSUAMG00000021124	GFI1	91	85.748	Ursus_americanus
ENSOPRG00000001473	GFI1	100	67.217	ENSXETG00000023006	gfi1	98	67.217	Xenopus_tropicalis
ENSOPRG00000001473	GFI1	100	61.647	ENSXMAG00000010523	gfi1ab	100	60.325	Xiphophorus_maculatus
ENSOPRG00000001473	GFI1	87	53.562	ENSXMAG00000009274	GFI1	70	54.737	Xiphophorus_maculatus