EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000001699 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrGeneScaffold_206:148034-148405
Accession: 101518162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000001559	LSM	PF01423.22	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000001689	LSM10-201	372	XM_004591704	ENSOPRP00000001559	123 (aa)	XP_004591761	UPI00017770BF

Gene Model

Click here to download ENSOPRG00000001699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000001699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000001699	LSM10	55	30.000	ENSOPRG00000003668	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000001699	LSM10	100	91.057	ENSG00000181817	LSM10	100	91.057	Homo_sapiens
ENSOPRG00000001699	LSM10	100	89.431	ENSAMEG00000019854	LSM10	100	89.431	Ailuropoda_melanoleuca
ENSOPRG00000001699	LSM10	96	66.102	ENSACIG00000015420	oscp1a	78	66.102	Amphilophus_citrinellus
ENSOPRG00000001699	LSM10	93	69.565	ENSAOCG00000014654	-	95	69.565	Amphiprion_ocellaris
ENSOPRG00000001699	LSM10	93	69.565	ENSAOCG00000015618	LSM10	95	69.565	Amphiprion_ocellaris
ENSOPRG00000001699	LSM10	90	65.766	ENSAOCG00000015607	LSM10	86	65.766	Amphiprion_ocellaris
ENSOPRG00000001699	LSM10	90	65.766	ENSAPEG00000021851	LSM10	86	65.766	Amphiprion_percula
ENSOPRG00000001699	LSM10	93	69.565	ENSAPEG00000021845	-	95	69.565	Amphiprion_percula
ENSOPRG00000001699	LSM10	91	64.286	ENSATEG00000006310	oscp1a	83	64.286	Anabas_testudineus
ENSOPRG00000001699	LSM10	100	68.293	ENSACAG00000001231	LSM10	100	68.293	Anolis_carolinensis
ENSOPRG00000001699	LSM10	100	91.057	ENSANAG00000018759	-	100	91.057	Aotus_nancymaae
ENSOPRG00000001699	LSM10	98	90.833	ENSANAG00000031489	-	98	90.833	Aotus_nancymaae
ENSOPRG00000001699	LSM10	94	68.103	ENSACLG00000004728	oscp1a	94	68.103	Astatotilapia_calliptera
ENSOPRG00000001699	LSM10	96	65.254	ENSAMXG00000025301	oscp1a	98	65.254	Astyanax_mexicanus
ENSOPRG00000001699	LSM10	98	90.833	ENSBTAG00000024096	LSM10	98	90.833	Bos_taurus
ENSOPRG00000001699	LSM10	100	90.244	ENSCJAG00000044880	LSM10	100	90.244	Callithrix_jacchus
ENSOPRG00000001699	LSM10	100	91.870	ENSCAFG00000003382	LSM10	100	91.870	Canis_familiaris
ENSOPRG00000001699	LSM10	100	91.870	ENSCAFG00020008920	LSM10	100	91.870	Canis_lupus_dingo
ENSOPRG00000001699	LSM10	98	90.833	ENSCHIG00000009398	LSM10	98	90.833	Capra_hircus
ENSOPRG00000001699	LSM10	100	91.057	ENSCAPG00000012567	LSM10	100	91.057	Cavia_aperea
ENSOPRG00000001699	LSM10	100	91.057	ENSCPOG00000039302	LSM10	100	91.057	Cavia_porcellus
ENSOPRG00000001699	LSM10	98	89.167	ENSCCAG00000008378	-	98	89.167	Cebus_capucinus
ENSOPRG00000001699	LSM10	100	91.057	ENSCCAG00000018913	-	100	91.057	Cebus_capucinus
ENSOPRG00000001699	LSM10	100	92.683	ENSCATG00000006589	LSM10	100	92.683	Cercocebus_atys
ENSOPRG00000001699	LSM10	100	91.870	ENSCLAG00000008633	LSM10	100	91.870	Chinchilla_lanigera
ENSOPRG00000001699	LSM10	100	92.683	ENSCSAG00000000134	LSM10	100	92.683	Chlorocebus_sabaeus
ENSOPRG00000001699	LSM10	100	91.200	ENSCHOG00000008615	LSM10	100	91.200	Choloepus_hoffmanni
ENSOPRG00000001699	LSM10	83	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSOPRG00000001699	LSM10	100	92.683	ENSCANG00000019928	LSM10	100	92.683	Colobus_angolensis_palliatus
ENSOPRG00000001699	LSM10	93	79.487	ENSCGRG00001022673	-	94	79.487	Cricetulus_griseus_chok1gshd
ENSOPRG00000001699	LSM10	98	90.083	ENSCGRG00001004317	-	99	90.083	Cricetulus_griseus_chok1gshd
ENSOPRG00000001699	LSM10	98	90.083	ENSCGRG00000014935	-	99	90.083	Cricetulus_griseus_crigri
ENSOPRG00000001699	LSM10	93	79.487	ENSCGRG00000015514	-	94	79.487	Cricetulus_griseus_crigri
ENSOPRG00000001699	LSM10	94	63.793	ENSCSEG00000010374	oscp1a	77	64.348	Cynoglossus_semilaevis
ENSOPRG00000001699	LSM10	97	62.185	ENSCVAG00000001536	oscp1a	90	62.185	Cyprinodon_variegatus
ENSOPRG00000001699	LSM10	69	68.235	ENSDARG00000109563	CABZ01074453.1	99	68.235	Danio_rerio
ENSOPRG00000001699	LSM10	98	68.595	ENSDARG00000101222	oscp1a	100	68.595	Danio_rerio
ENSOPRG00000001699	LSM10	99	91.803	ENSDNOG00000036662	LSM10	99	91.803	Dasypus_novemcinctus
ENSOPRG00000001699	LSM10	100	90.244	ENSDORG00000007579	Lsm10	100	90.244	Dipodomys_ordii
ENSOPRG00000001699	LSM10	100	90.244	ENSETEG00000005703	LSM10	100	90.244	Echinops_telfairi
ENSOPRG00000001699	LSM10	98	52.066	ENSEBUG00000001312	oscp1a	99	52.066	Eptatretus_burgeri
ENSOPRG00000001699	LSM10	100	90.244	ENSEASG00005012194	LSM10	100	90.244	Equus_asinus_asinus
ENSOPRG00000001699	LSM10	100	91.057	ENSECAG00000005071	LSM10	100	91.057	Equus_caballus
ENSOPRG00000001699	LSM10	100	88.618	ENSEEUG00000012032	LSM10	100	88.618	Erinaceus_europaeus
ENSOPRG00000001699	LSM10	99	67.213	ENSELUG00000007452	oscp1a	100	67.213	Esox_lucius
ENSOPRG00000001699	LSM10	100	72.358	ENSFALG00000000851	LSM10	100	72.358	Ficedula_albicollis
ENSOPRG00000001699	LSM10	100	88.618	ENSFDAG00000021056	LSM10	100	88.618	Fukomys_damarensis
ENSOPRG00000001699	LSM10	89	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSOPRG00000001699	LSM10	85	64.762	ENSGMOG00000019832	oscp1a	88	64.762	Gadus_morhua
ENSOPRG00000001699	LSM10	100	74.797	ENSGALG00000002127	LSM10	100	74.797	Gallus_gallus
ENSOPRG00000001699	LSM10	93	61.017	ENSGAFG00000016445	oscp1a	94	61.017	Gambusia_affinis
ENSOPRG00000001699	LSM10	94	63.793	ENSGACG00000002329	oscp1a	95	63.793	Gasterosteus_aculeatus
ENSOPRG00000001699	LSM10	100	76.423	ENSGAGG00000024848	LSM10	100	76.423	Gopherus_agassizii
ENSOPRG00000001699	LSM10	100	91.057	ENSGGOG00000003556	LSM10	100	91.057	Gorilla_gorilla
ENSOPRG00000001699	LSM10	94	68.103	ENSHBUG00000001722	oscp1a	94	68.103	Haplochromis_burtoni
ENSOPRG00000001699	LSM10	100	90.244	ENSHGLG00000011625	LSM10	100	90.244	Heterocephalus_glaber_female
ENSOPRG00000001699	LSM10	100	90.244	ENSHGLG00100001769	LSM10	100	90.244	Heterocephalus_glaber_male
ENSOPRG00000001699	LSM10	87	65.421	ENSIPUG00000005808	oscp1a	93	65.421	Ictalurus_punctatus
ENSOPRG00000001699	LSM10	100	89.431	ENSSTOG00000000606	LSM10	100	89.431	Ictidomys_tridecemlineatus
ENSOPRG00000001699	LSM10	94	65.517	ENSKMAG00000012143	oscp1a	96	65.517	Kryptolebias_marmoratus
ENSOPRG00000001699	LSM10	98	65.000	ENSLBEG00000017764	oscp1a	98	65.000	Labrus_bergylta
ENSOPRG00000001699	LSM10	100	75.610	ENSLACG00000015904	LSM10	95	75.610	Latimeria_chalumnae
ENSOPRG00000001699	LSM10	98	69.167	ENSLOCG00000018277	oscp1a	98	69.167	Lepisosteus_oculatus
ENSOPRG00000001699	LSM10	100	91.057	ENSLAFG00000009600	LSM10	100	91.057	Loxodonta_africana
ENSOPRG00000001699	LSM10	100	92.683	ENSMFAG00000009115	LSM10	100	92.683	Macaca_fascicularis
ENSOPRG00000001699	LSM10	100	92.683	ENSMMUG00000017338	LSM10	100	92.683	Macaca_mulatta
ENSOPRG00000001699	LSM10	100	92.683	ENSMNEG00000020023	LSM10	100	92.683	Macaca_nemestrina
ENSOPRG00000001699	LSM10	100	92.683	ENSMLEG00000025150	LSM10	100	92.683	Mandrillus_leucophaeus
ENSOPRG00000001699	LSM10	98	65.833	ENSMAMG00000004427	oscp1a	98	65.833	Mastacembelus_armatus
ENSOPRG00000001699	LSM10	94	68.103	ENSMZEG00005026307	oscp1a	94	68.103	Maylandia_zebra
ENSOPRG00000001699	LSM10	100	73.984	ENSMGAG00000015707	LSM10	100	73.984	Meleagris_gallopavo
ENSOPRG00000001699	LSM10	98	90.909	ENSMAUG00000016624	Lsm10	99	90.909	Mesocricetus_auratus
ENSOPRG00000001699	LSM10	99	90.164	ENSMOCG00000021943	Lsm10	100	90.164	Microtus_ochrogaster
ENSOPRG00000001699	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSOPRG00000001699	LSM10	100	84.553	ENSMODG00000023328	LSM10	100	84.553	Monodelphis_domestica
ENSOPRG00000001699	LSM10	56	58.108	ENSMALG00000012661	oscp1a	58	58.108	Monopterus_albus
ENSOPRG00000001699	LSM10	98	90.083	MGP_CAROLIEiJ_G0026467	Lsm10	100	91.398	Mus_caroli
ENSOPRG00000001699	LSM10	98	90.909	ENSMUSG00000050188	Lsm10	100	92.473	Mus_musculus
ENSOPRG00000001699	LSM10	98	90.909	MGP_PahariEiJ_G0028798	Lsm10	100	92.473	Mus_pahari
ENSOPRG00000001699	LSM10	98	90.909	MGP_SPRETEiJ_G0027446	Lsm10	100	92.473	Mus_spretus
ENSOPRG00000001699	LSM10	100	91.870	ENSMPUG00000018593	LSM10	100	91.870	Mustela_putorius_furo
ENSOPRG00000001699	LSM10	100	88.618	ENSMLUG00000023895	LSM10	100	88.618	Myotis_lucifugus
ENSOPRG00000001699	LSM10	100	91.057	ENSNGAG00000015011	Lsm10	100	91.057	Nannospalax_galili
ENSOPRG00000001699	LSM10	94	68.966	ENSNBRG00000014306	oscp1a	94	68.966	Neolamprologus_brichardi
ENSOPRG00000001699	LSM10	100	91.870	ENSNLEG00000033754	LSM10	100	91.870	Nomascus_leucogenys
ENSOPRG00000001699	LSM10	100	84.553	ENSMEUG00000006313	LSM10	100	84.553	Notamacropus_eugenii
ENSOPRG00000001699	LSM10	100	91.870	ENSODEG00000019161	LSM10	100	91.870	Octodon_degus
ENSOPRG00000001699	LSM10	94	68.966	ENSONIG00000020904	oscp1a	95	68.966	Oreochromis_niloticus
ENSOPRG00000001699	LSM10	100	77.236	ENSOANG00000002066	LSM10	100	77.236	Ornithorhynchus_anatinus
ENSOPRG00000001699	LSM10	100	96.748	ENSOCUG00000005333	LSM10	100	96.748	Oryctolagus_cuniculus
ENSOPRG00000001699	LSM10	95	64.957	ENSORLG00000009504	oscp1a	97	64.957	Oryzias_latipes
ENSOPRG00000001699	LSM10	95	64.957	ENSORLG00020016201	oscp1a	97	64.957	Oryzias_latipes_hni
ENSOPRG00000001699	LSM10	95	65.812	ENSORLG00015007794	oscp1a	97	65.812	Oryzias_latipes_hsok
ENSOPRG00000001699	LSM10	100	89.431	ENSOGAG00000002653	LSM10	100	89.431	Otolemur_garnettii
ENSOPRG00000001699	LSM10	98	90.833	ENSOARG00000009596	LSM10	98	90.833	Ovis_aries
ENSOPRG00000001699	LSM10	100	91.057	ENSPPAG00000023465	LSM10	100	91.057	Pan_paniscus
ENSOPRG00000001699	LSM10	100	91.057	ENSPPRG00000014619	LSM10	100	91.057	Panthera_pardus
ENSOPRG00000001699	LSM10	100	91.057	ENSPTIG00000004613	LSM10	100	91.057	Panthera_tigris_altaica
ENSOPRG00000001699	LSM10	100	91.057	ENSPTRG00000000539	LSM10	100	91.057	Pan_troglodytes
ENSOPRG00000001699	LSM10	100	92.683	ENSPANG00000023172	LSM10	100	92.683	Papio_anubis
ENSOPRG00000001699	LSM10	98	65.000	ENSPKIG00000003728	oscp1a	97	65.000	Paramormyrops_kingsleyae
ENSOPRG00000001699	LSM10	100	73.171	ENSPSIG00000000590	LSM10	100	73.171	Pelodiscus_sinensis
ENSOPRG00000001699	LSM10	62	61.842	ENSPMGG00000015718	oscp1a	99	61.842	Periophthalmus_magnuspinnatus
ENSOPRG00000001699	LSM10	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSOPRG00000001699	LSM10	91	67.857	ENSPFOG00000020490	oscp1a	95	67.857	Poecilia_formosa
ENSOPRG00000001699	LSM10	91	67.857	ENSPLAG00000016537	oscp1a	85	67.857	Poecilia_latipinna
ENSOPRG00000001699	LSM10	88	68.519	ENSPMEG00000000174	oscp1a	94	68.519	Poecilia_mexicana
ENSOPRG00000001699	LSM10	93	65.789	ENSPREG00000009899	oscp1a	87	65.789	Poecilia_reticulata
ENSOPRG00000001699	LSM10	100	91.870	ENSPPYG00000001539	LSM10	100	91.870	Pongo_abelii
ENSOPRG00000001699	LSM10	96	91.525	ENSPCAG00000002520	LSM10	97	91.525	Procavia_capensis
ENSOPRG00000001699	LSM10	100	90.244	ENSPVAG00000008644	LSM10	100	90.244	Pteropus_vampyrus
ENSOPRG00000001699	LSM10	94	68.103	ENSPNYG00000003138	oscp1a	94	68.103	Pundamilia_nyererei
ENSOPRG00000001699	LSM10	95	64.103	ENSPNAG00000028829	oscp1a	97	64.103	Pygocentrus_nattereri
ENSOPRG00000001699	LSM10	98	91.736	ENSRNOG00000025716	Lsm10	99	91.736	Rattus_norvegicus
ENSOPRG00000001699	LSM10	100	92.683	ENSRBIG00000001561	LSM10	100	92.683	Rhinopithecus_bieti
ENSOPRG00000001699	LSM10	100	92.683	ENSRROG00000011414	LSM10	100	92.683	Rhinopithecus_roxellana
ENSOPRG00000001699	LSM10	100	91.057	ENSSBOG00000036413	-	100	91.057	Saimiri_boliviensis_boliviensis
ENSOPRG00000001699	LSM10	100	83.740	ENSSHAG00000018056	LSM10	100	83.740	Sarcophilus_harrisii
ENSOPRG00000001699	LSM10	98	65.289	ENSSFOG00015019954	lsm10	99	65.289	Scleropages_formosus
ENSOPRG00000001699	LSM10	93	65.217	ENSSMAG00000001297	oscp1a	98	65.217	Scophthalmus_maximus
ENSOPRG00000001699	LSM10	94	62.931	ENSSDUG00000007090	oscp1a	94	62.931	Seriola_dumerili
ENSOPRG00000001699	LSM10	94	63.793	ENSSLDG00000000800	oscp1a	96	63.793	Seriola_lalandi_dorsalis
ENSOPRG00000001699	LSM10	100	88.800	ENSSARG00000004211	LSM10	100	89.600	Sorex_araneus
ENSOPRG00000001699	LSM10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSOPRG00000001699	LSM10	100	89.431	ENSSSCG00000038916	LSM10	100	89.431	Sus_scrofa
ENSOPRG00000001699	LSM10	99	72.951	ENSTGUG00000001600	-	100	72.951	Taeniopygia_guttata
ENSOPRG00000001699	LSM10	99	72.951	ENSTGUG00000001602	-	100	72.951	Taeniopygia_guttata
ENSOPRG00000001699	LSM10	95	65.812	ENSTRUG00000010531	oscp1a	94	65.812	Takifugu_rubripes
ENSOPRG00000001699	LSM10	100	91.057	ENSTBEG00000016674	LSM10	100	91.057	Tupaia_belangeri
ENSOPRG00000001699	LSM10	100	90.244	ENSUAMG00000020265	LSM10	100	90.244	Ursus_americanus
ENSOPRG00000001699	LSM10	100	90.244	ENSUMAG00000001438	LSM10	57	90.244	Ursus_maritimus
ENSOPRG00000001699	LSM10	100	91.870	ENSVVUG00000023209	LSM10	100	91.870	Vulpes_vulpes
ENSOPRG00000001699	LSM10	100	69.106	ENSXETG00000027631	lsm10	100	69.106	Xenopus_tropicalis
ENSOPRG00000001699	LSM10	95	64.103	ENSXCOG00000018776	oscp1a	72	65.217	Xiphophorus_couchianus
ENSOPRG00000001699	LSM10	95	64.167	ENSXMAG00000019963	oscp1a	96	64.167	Xiphophorus_maculatus