EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000001776 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 128179 bases
Position: chrGeneScaffold_550:245128-373306
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000001650	PUF	PF00806.19	1.2e-31	1	4
ENSOPRP00000001650	PUF	PF00806.19	1.2e-31	2	4
ENSOPRP00000001650	PUF	PF00806.19	1.2e-31	3	4
ENSOPRP00000001650	PUF	PF00806.19	1.2e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000001788	PUM1-201	3573	-	ENSOPRP00000001650	1190 (aa)	-	UPI0001777CD2

Gene Model

Click here to download ENSOPRG00000001776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000001776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000001776	PUM1	73	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSOPRG00000001776	PUM1	70	91.589	ENSAPOG00000021632	pum1	81	91.589	Acanthochromis_polyacanthus
ENSOPRG00000001776	PUM1	73	99.065	ENSAMEG00000017656	PUM1	81	99.065	Ailuropoda_melanoleuca
ENSOPRG00000001776	PUM1	75	90.654	ENSACIG00000021013	pum1	81	90.654	Amphilophus_citrinellus
ENSOPRG00000001776	PUM1	70	91.589	ENSAOCG00000003944	pum1	81	91.589	Amphiprion_ocellaris
ENSOPRG00000001776	PUM1	70	91.589	ENSAPEG00000014550	pum1	81	91.589	Amphiprion_percula
ENSOPRG00000001776	PUM1	70	91.589	ENSATEG00000016004	pum1	81	91.589	Anabas_testudineus
ENSOPRG00000001776	PUM1	76	98.131	ENSAPLG00000009351	PUM1	83	98.131	Anas_platyrhynchos
ENSOPRG00000001776	PUM1	75	98.131	ENSACAG00000000682	PUM1	81	98.131	Anolis_carolinensis
ENSOPRG00000001776	PUM1	72	100.000	ENSANAG00000027865	PUM1	84	100.000	Aotus_nancymaae
ENSOPRG00000001776	PUM1	65	91.589	ENSACLG00000019354	pum1	80	91.589	Astatotilapia_calliptera
ENSOPRG00000001776	PUM1	70	91.393	ENSAMXG00000020607	pum1	80	90.654	Astyanax_mexicanus
ENSOPRG00000001776	PUM1	72	99.203	ENSBTAG00000018979	PUM1	84	99.203	Bos_taurus
ENSOPRG00000001776	PUM1	73	100.000	ENSCJAG00000006035	PUM1	84	100.000	Callithrix_jacchus
ENSOPRG00000001776	PUM1	73	99.065	ENSCAFG00000011205	PUM1	86	99.065	Canis_familiaris
ENSOPRG00000001776	PUM1	67	99.065	ENSCAFG00020024616	PUM1	81	99.065	Canis_lupus_dingo
ENSOPRG00000001776	PUM1	72	99.203	ENSCHIG00000012952	PUM1	84	99.203	Capra_hircus
ENSOPRG00000001776	PUM1	73	100.000	ENSTSYG00000008868	PUM1	84	100.000	Carlito_syrichta
ENSOPRG00000001776	PUM1	73	100.000	ENSCPOG00000031613	PUM1	84	100.000	Cavia_porcellus
ENSOPRG00000001776	PUM1	73	100.000	ENSCATG00000017991	PUM1	86	100.000	Cercocebus_atys
ENSOPRG00000001776	PUM1	76	100.000	ENSCLAG00000007662	PUM1	84	100.000	Chinchilla_lanigera
ENSOPRG00000001776	PUM1	73	100.000	ENSCSAG00000001028	PUM1	83	100.000	Chlorocebus_sabaeus
ENSOPRG00000001776	PUM1	66	98.131	ENSCHOG00000010245	PUM1	68	98.131	Choloepus_hoffmanni
ENSOPRG00000001776	PUM1	73	98.131	ENSCPBG00000009288	PUM1	83	98.131	Chrysemys_picta_bellii
ENSOPRG00000001776	PUM1	73	100.000	ENSCANG00000042606	PUM1	86	100.000	Colobus_angolensis_palliatus
ENSOPRG00000001776	PUM1	72	100.000	ENSCGRG00001024949	Pum1	84	100.000	Cricetulus_griseus_chok1gshd
ENSOPRG00000001776	PUM1	72	100.000	ENSCGRG00000014197	Pum1	84	100.000	Cricetulus_griseus_crigri
ENSOPRG00000001776	PUM1	60	91.589	ENSCSEG00000015981	pum1	80	91.589	Cynoglossus_semilaevis
ENSOPRG00000001776	PUM1	75	91.589	ENSCVAG00000007043	pum1	81	91.589	Cyprinodon_variegatus
ENSOPRG00000001776	PUM1	70	92.213	ENSDARG00000099256	pum1	83	91.440	Danio_rerio
ENSOPRG00000001776	PUM1	73	98.807	ENSDNOG00000010939	PUM1	84	98.807	Dasypus_novemcinctus
ENSOPRG00000001776	PUM1	55	100.000	ENSDORG00000001875	Pum1	81	100.000	Dipodomys_ordii
ENSOPRG00000001776	PUM1	58	98.598	ENSETEG00000004355	PUM1	67	98.598	Echinops_telfairi
ENSOPRG00000001776	PUM1	73	99.065	ENSEASG00005010813	PUM1	84	99.065	Equus_asinus_asinus
ENSOPRG00000001776	PUM1	76	99.065	ENSECAG00000021369	PUM1	84	99.065	Equus_caballus
ENSOPRG00000001776	PUM1	66	99.664	ENSEEUG00000003871	PUM1	71	99.664	Erinaceus_europaeus
ENSOPRG00000001776	PUM1	75	89.720	ENSELUG00000002409	pum1	83	91.085	Esox_lucius
ENSOPRG00000001776	PUM1	73	99.402	ENSFCAG00000010374	PUM1	84	99.205	Felis_catus
ENSOPRG00000001776	PUM1	76	98.131	ENSFALG00000001214	PUM1	80	98.131	Ficedula_albicollis
ENSOPRG00000001776	PUM1	73	100.000	ENSFDAG00000011319	PUM1	84	100.000	Fukomys_damarensis
ENSOPRG00000001776	PUM1	75	91.589	ENSGMOG00000010491	pum1	82	91.589	Gadus_morhua
ENSOPRG00000001776	PUM1	76	98.131	ENSGALG00000042598	PUM1	90	98.131	Gallus_gallus
ENSOPRG00000001776	PUM1	75	91.589	ENSGAFG00000015617	pum1	81	91.589	Gambusia_affinis
ENSOPRG00000001776	PUM1	75	90.654	ENSGACG00000005717	pum1	81	90.654	Gasterosteus_aculeatus
ENSOPRG00000001776	PUM1	75	98.131	ENSGAGG00000001290	PUM1	90	98.131	Gopherus_agassizii
ENSOPRG00000001776	PUM1	73	100.000	ENSGGOG00000011983	PUM1	84	100.000	Gorilla_gorilla
ENSOPRG00000001776	PUM1	75	91.589	ENSHBUG00000018718	pum1	81	91.589	Haplochromis_burtoni
ENSOPRG00000001776	PUM1	73	100.000	ENSHGLG00000013819	Pum1	84	100.000	Heterocephalus_glaber_female
ENSOPRG00000001776	PUM1	73	100.000	ENSHGLG00100008621	Pum1	84	100.000	Heterocephalus_glaber_male
ENSOPRG00000001776	PUM1	64	90.654	ENSHCOG00000005149	pum1	81	90.654	Hippocampus_comes
ENSOPRG00000001776	PUM1	70	90.574	ENSIPUG00000020421	pum1	82	89.883	Ictalurus_punctatus
ENSOPRG00000001776	PUM1	73	100.000	ENSSTOG00000010757	PUM1	84	100.000	Ictidomys_tridecemlineatus
ENSOPRG00000001776	PUM1	73	99.609	ENSJJAG00000000530	Pum1	84	99.609	Jaculus_jaculus
ENSOPRG00000001776	PUM1	70	90.654	ENSKMAG00000003481	pum1	81	90.654	Kryptolebias_marmoratus
ENSOPRG00000001776	PUM1	75	91.589	ENSLBEG00000002527	pum1	82	91.589	Labrus_bergylta
ENSOPRG00000001776	PUM1	75	96.262	ENSLACG00000017188	PUM1	83	96.262	Latimeria_chalumnae
ENSOPRG00000001776	PUM1	75	97.196	ENSLOCG00000005210	pum1	83	97.196	Lepisosteus_oculatus
ENSOPRG00000001776	PUM1	73	99.065	ENSLAFG00000003178	PUM1	84	99.065	Loxodonta_africana
ENSOPRG00000001776	PUM1	73	100.000	ENSMFAG00000010291	PUM1	84	100.000	Macaca_fascicularis
ENSOPRG00000001776	PUM1	73	100.000	ENSMMUG00000013520	PUM1	84	100.000	Macaca_mulatta
ENSOPRG00000001776	PUM1	73	100.000	ENSMNEG00000034639	PUM1	84	100.000	Macaca_nemestrina
ENSOPRG00000001776	PUM1	73	100.000	ENSMLEG00000038743	PUM1	86	100.000	Mandrillus_leucophaeus
ENSOPRG00000001776	PUM1	70	91.589	ENSMAMG00000011606	pum1	81	91.589	Mastacembelus_armatus
ENSOPRG00000001776	PUM1	75	91.589	ENSMZEG00005005834	pum1	81	91.589	Maylandia_zebra
ENSOPRG00000001776	PUM1	76	98.131	ENSMGAG00000000724	PUM1	83	98.131	Meleagris_gallopavo
ENSOPRG00000001776	PUM1	73	100.000	ENSMAUG00000022090	Pum1	84	100.000	Mesocricetus_auratus
ENSOPRG00000001776	PUM1	73	99.065	ENSMICG00000007713	-	84	99.065	Microcebus_murinus
ENSOPRG00000001776	PUM1	73	98.131	ENSMICG00000012213	-	83	98.131	Microcebus_murinus
ENSOPRG00000001776	PUM1	73	99.609	ENSMOCG00000015463	Pum1	84	99.609	Microtus_ochrogaster
ENSOPRG00000001776	PUM1	54	90.654	ENSMMOG00000019817	pum1	78	90.654	Mola_mola
ENSOPRG00000001776	PUM1	73	98.131	ENSMODG00000017067	PUM1	84	98.131	Monodelphis_domestica
ENSOPRG00000001776	PUM1	54	91.589	ENSMALG00000016399	pum1	79	91.589	Monopterus_albus
ENSOPRG00000001776	PUM1	73	100.000	MGP_CAROLIEiJ_G0026549	Pum1	84	100.000	Mus_caroli
ENSOPRG00000001776	PUM1	73	100.000	ENSMUSG00000028580	Pum1	84	100.000	Mus_musculus
ENSOPRG00000001776	PUM1	73	100.000	MGP_PahariEiJ_G0028881	Pum1	84	100.000	Mus_pahari
ENSOPRG00000001776	PUM1	73	100.000	MGP_SPRETEiJ_G0027529	Pum1	84	100.000	Mus_spretus
ENSOPRG00000001776	PUM1	73	99.065	ENSMPUG00000015454	PUM1	84	99.065	Mustela_putorius_furo
ENSOPRG00000001776	PUM1	72	99.065	ENSMLUG00000006490	PUM1	84	99.065	Myotis_lucifugus
ENSOPRG00000001776	PUM1	73	100.000	ENSNGAG00000002378	Pum1	84	100.000	Nannospalax_galili
ENSOPRG00000001776	PUM1	50	91.765	ENSNBRG00000010689	pum1	78	91.589	Neolamprologus_brichardi
ENSOPRG00000001776	PUM1	73	100.000	ENSNLEG00000001151	PUM1	83	100.000	Nomascus_leucogenys
ENSOPRG00000001776	PUM1	57	100.000	ENSMEUG00000000976	-	58	97.196	Notamacropus_eugenii
ENSOPRG00000001776	PUM1	73	100.000	ENSODEG00000003465	PUM1	84	100.000	Octodon_degus
ENSOPRG00000001776	PUM1	75	91.589	ENSONIG00000002290	pum1	81	91.589	Oreochromis_niloticus
ENSOPRG00000001776	PUM1	51	92.308	ENSOANG00000004902	-	72	92.308	Ornithorhynchus_anatinus
ENSOPRG00000001776	PUM1	72	99.606	ENSOCUG00000008641	PUM1	83	99.606	Oryctolagus_cuniculus
ENSOPRG00000001776	PUM1	76	91.589	ENSORLG00000011482	pum1	82	91.589	Oryzias_latipes
ENSOPRG00000001776	PUM1	76	91.589	ENSORLG00020019461	pum1	82	91.589	Oryzias_latipes_hni
ENSOPRG00000001776	PUM1	75	91.589	ENSORLG00015011375	pum1	82	91.589	Oryzias_latipes_hsok
ENSOPRG00000001776	PUM1	54	90.654	ENSOMEG00000009312	pum1	79	90.654	Oryzias_melastigma
ENSOPRG00000001776	PUM1	73	100.000	ENSOGAG00000011063	PUM1	79	100.000	Otolemur_garnettii
ENSOPRG00000001776	PUM1	73	99.065	ENSOARG00000001899	PUM1	84	99.065	Ovis_aries
ENSOPRG00000001776	PUM1	73	100.000	ENSPPAG00000044003	PUM1	84	100.000	Pan_paniscus
ENSOPRG00000001776	PUM1	73	99.406	ENSPPRG00000001370	PUM1	81	99.406	Panthera_pardus
ENSOPRG00000001776	PUM1	73	99.065	ENSPTIG00000010798	PUM1	81	99.065	Panthera_tigris_altaica
ENSOPRG00000001776	PUM1	73	100.000	ENSPTRG00000000453	PUM1	84	100.000	Pan_troglodytes
ENSOPRG00000001776	PUM1	73	100.000	ENSPANG00000016338	PUM1	84	100.000	Papio_anubis
ENSOPRG00000001776	PUM1	75	91.589	ENSPKIG00000010578	pum1	87	91.589	Paramormyrops_kingsleyae
ENSOPRG00000001776	PUM1	73	98.131	ENSPSIG00000014118	PUM1	84	98.131	Pelodiscus_sinensis
ENSOPRG00000001776	PUM1	73	100.000	ENSPEMG00000010009	Pum1	84	100.000	Peromyscus_maniculatus_bairdii
ENSOPRG00000001776	PUM1	75	98.131	ENSPCIG00000014151	PUM1	84	98.131	Phascolarctos_cinereus
ENSOPRG00000001776	PUM1	69	91.589	ENSPFOG00000007289	pum1	82	91.589	Poecilia_formosa
ENSOPRG00000001776	PUM1	75	91.589	ENSPLAG00000007256	pum1	83	91.589	Poecilia_latipinna
ENSOPRG00000001776	PUM1	65	91.589	ENSPMEG00000019543	pum1	80	91.589	Poecilia_mexicana
ENSOPRG00000001776	PUM1	75	91.589	ENSPREG00000005195	pum1	82	91.589	Poecilia_reticulata
ENSOPRG00000001776	PUM1	73	100.000	ENSPPYG00000001621	PUM1	84	100.000	Pongo_abelii
ENSOPRG00000001776	PUM1	50	99.065	ENSPCAG00000001979	PUM1	58	99.065	Procavia_capensis
ENSOPRG00000001776	PUM1	73	99.065	ENSPCOG00000004398	PUM1	84	99.065	Propithecus_coquereli
ENSOPRG00000001776	PUM1	73	99.010	ENSPVAG00000005207	PUM1	82	99.010	Pteropus_vampyrus
ENSOPRG00000001776	PUM1	75	91.589	ENSPNYG00000009518	pum1	81	91.589	Pundamilia_nyererei
ENSOPRG00000001776	PUM1	75	90.654	ENSPNAG00000026728	pum1	83	90.654	Pygocentrus_nattereri
ENSOPRG00000001776	PUM1	72	100.000	ENSRNOG00000011709	Pum1	84	100.000	Rattus_norvegicus
ENSOPRG00000001776	PUM1	73	100.000	ENSRBIG00000042521	PUM1	84	100.000	Rhinopithecus_bieti
ENSOPRG00000001776	PUM1	73	100.000	ENSRROG00000020156	PUM1	84	100.000	Rhinopithecus_roxellana
ENSOPRG00000001776	PUM1	76	100.000	ENSSBOG00000032037	PUM1	84	100.000	Saimiri_boliviensis_boliviensis
ENSOPRG00000001776	PUM1	73	98.131	ENSSHAG00000010918	PUM1	84	98.131	Sarcophilus_harrisii
ENSOPRG00000001776	PUM1	75	91.589	ENSSMAG00000010918	pum1	82	91.589	Scophthalmus_maximus
ENSOPRG00000001776	PUM1	70	91.589	ENSSDUG00000009021	pum1	82	91.589	Seriola_dumerili
ENSOPRG00000001776	PUM1	70	91.589	ENSSLDG00000009667	pum1	81	91.589	Seriola_lalandi_dorsalis
ENSOPRG00000001776	PUM1	67	99.563	ENSSARG00000003055	PUM1	76	99.563	Sorex_araneus
ENSOPRG00000001776	PUM1	76	98.131	ENSSPUG00000006267	PUM1	83	98.131	Sphenodon_punctatus
ENSOPRG00000001776	PUM1	70	91.589	ENSSPAG00000016636	pum1	81	91.589	Stegastes_partitus
ENSOPRG00000001776	PUM1	73	99.205	ENSSSCG00000003591	PUM1	84	99.205	Sus_scrofa
ENSOPRG00000001776	PUM1	75	91.589	ENSTRUG00000013121	pum1	82	91.589	Takifugu_rubripes
ENSOPRG00000001776	PUM1	71	91.589	ENSTNIG00000016983	pum1	82	91.589	Tetraodon_nigroviridis
ENSOPRG00000001776	PUM1	70	97.030	ENSTBEG00000013810	PUM1	71	97.030	Tupaia_belangeri
ENSOPRG00000001776	PUM1	65	99.512	ENSTTRG00000007436	PUM1	74	99.512	Tursiops_truncatus
ENSOPRG00000001776	PUM1	63	99.004	ENSUAMG00000018262	-	82	99.004	Ursus_americanus
ENSOPRG00000001776	PUM1	71	99.065	ENSUMAG00000009211	PUM1	83	99.065	Ursus_maritimus
ENSOPRG00000001776	PUM1	65	99.329	ENSVPAG00000005902	PUM1	76	99.329	Vicugna_pacos
ENSOPRG00000001776	PUM1	73	99.065	ENSVVUG00000014631	PUM1	84	99.065	Vulpes_vulpes
ENSOPRG00000001776	PUM1	71	96.875	ENSXETG00000012904	pum1	72	96.875	Xenopus_tropicalis
ENSOPRG00000001776	PUM1	75	91.589	ENSXMAG00000002945	pum1	81	91.589	Xiphophorus_maculatus