EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000001880 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 44469 bases
Position: chrGeneScaffold_2958:141556-186024
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000001763	RNA_pol_Rpb1_5	PF04998.17	5.2e-89	1	1
ENSOPRP00000001763	RNA_pol_Rpb1_4	PF05000.17	2.9e-32	1	1
ENSOPRP00000001763	RNA_pol_Rpb1_2	PF00623.20	6.5e-75	1	1
ENSOPRP00000001763	RNA_pol_Rpb1_3	PF04983.18	2.9e-36	1	1
ENSOPRP00000001763	RNA_pol_Rpb1_1	PF04997.12	8.7e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000001910	-	4170	-	ENSOPRP00000001763	1389 (aa)	-	UPI0001777068

Gene Model

Click here to download ENSOPRG00000001880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000001880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000001880	-	88	38.293	ENSOPRG00000015116	-	80	38.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000001880	-	100	93.453	ENSG00000148606	POLR3A	98	98.101	Homo_sapiens
ENSOPRG00000001880	-	62	78.862	ENSAPOG00000022727	polr3a	99	78.862	Acanthochromis_polyacanthus
ENSOPRG00000001880	-	100	92.606	ENSAMEG00000017801	POLR3A	100	92.606	Ailuropoda_melanoleuca
ENSOPRG00000001880	-	93	85.351	ENSACIG00000024504	polr3a	97	85.351	Amphilophus_citrinellus
ENSOPRG00000001880	-	100	82.374	ENSAOCG00000003949	-	100	82.374	Amphiprion_ocellaris
ENSOPRG00000001880	-	100	85.683	ENSAOCG00000002071	polr3a	100	85.683	Amphiprion_ocellaris
ENSOPRG00000001880	-	100	85.540	ENSAPEG00000001966	-	100	85.540	Amphiprion_percula
ENSOPRG00000001880	-	100	85.683	ENSAPEG00000013351	polr3a	100	85.683	Amphiprion_percula
ENSOPRG00000001880	-	100	85.324	ENSATEG00000023277	polr3a	100	85.324	Anabas_testudineus
ENSOPRG00000001880	-	96	94.060	ENSAPLG00000015878	POLR3A	96	94.060	Anas_platyrhynchos
ENSOPRG00000001880	-	93	88.235	ENSACAG00000007985	POLR3A	99	88.235	Anolis_carolinensis
ENSOPRG00000001880	-	100	90.596	ENSANAG00000028922	POLR3A	96	98.726	Aotus_nancymaae
ENSOPRG00000001880	-	100	84.748	ENSACLG00000005914	polr3a	100	84.748	Astatotilapia_calliptera
ENSOPRG00000001880	-	100	82.590	ENSAMXG00000018852	polr3a	100	82.590	Astyanax_mexicanus
ENSOPRG00000001880	-	100	92.806	ENSBTAG00000013259	POLR3A	100	92.806	Bos_taurus
ENSOPRG00000001880	-	94	56.757	WBGene00004411	rpc-1	94	56.757	Caenorhabditis_elegans
ENSOPRG00000001880	-	100	93.309	ENSCJAG00000001015	POLR3A	96	98.101	Callithrix_jacchus
ENSOPRG00000001880	-	100	92.878	ENSCAFG00000015546	POLR3A	100	92.878	Canis_familiaris
ENSOPRG00000001880	-	100	92.878	ENSCAFG00020014711	POLR3A	100	92.878	Canis_lupus_dingo
ENSOPRG00000001880	-	100	92.518	ENSCHIG00000000352	POLR3A	100	92.518	Capra_hircus
ENSOPRG00000001880	-	100	92.878	ENSTSYG00000006671	POLR3A	100	92.878	Carlito_syrichta
ENSOPRG00000001880	-	96	95.263	ENSCAPG00000016031	POLR3A	97	95.263	Cavia_aperea
ENSOPRG00000001880	-	100	92.014	ENSCPOG00000022387	POLR3A	100	92.014	Cavia_porcellus
ENSOPRG00000001880	-	100	91.079	ENSCCAG00000032995	POLR3A	96	98.101	Cebus_capucinus
ENSOPRG00000001880	-	100	93.309	ENSCATG00000035842	POLR3A	98	98.101	Cercocebus_atys
ENSOPRG00000001880	-	100	91.511	ENSCLAG00000009629	POLR3A	100	91.511	Chinchilla_lanigera
ENSOPRG00000001880	-	100	93.453	ENSCSAG00000009292	POLR3A	100	93.453	Chlorocebus_sabaeus
ENSOPRG00000001880	-	76	88.462	ENSCHOG00000008368	POLR3A	89	88.462	Choloepus_hoffmanni
ENSOPRG00000001880	-	99	90.425	ENSCPBG00000002079	POLR3A	99	90.425	Chrysemys_picta_bellii
ENSOPRG00000001880	-	99	66.571	ENSCSAVG00000009925	-	99	66.571	Ciona_savignyi
ENSOPRG00000001880	-	83	92.994	ENSCANG00000041071	POLR3A	98	97.468	Colobus_angolensis_palliatus
ENSOPRG00000001880	-	78	97.436	ENSCGRG00001015599	-	92	97.436	Cricetulus_griseus_chok1gshd
ENSOPRG00000001880	-	88	90.811	ENSCGRG00000001019	Polr3a	100	90.811	Cricetulus_griseus_crigri
ENSOPRG00000001880	-	100	85.252	ENSCSEG00000016653	polr3a	100	85.252	Cynoglossus_semilaevis
ENSOPRG00000001880	-	100	84.892	ENSCVAG00000023049	polr3a	100	84.892	Cyprinodon_variegatus
ENSOPRG00000001880	-	99	85.529	ENSDARG00000102569	polr3a	99	85.529	Danio_rerio
ENSOPRG00000001880	-	100	92.662	ENSDNOG00000010194	POLR3A	100	92.662	Dasypus_novemcinctus
ENSOPRG00000001880	-	100	93.094	ENSDORG00000000184	Polr3a	100	93.094	Dipodomys_ordii
ENSOPRG00000001880	-	95	57.186	FBgn0030687	CG17209	95	57.186	Drosophila_melanogaster
ENSOPRG00000001880	-	79	98.381	ENSETEG00000007477	POLR3A	80	98.381	Echinops_telfairi
ENSOPRG00000001880	-	59	74.473	ENSEBUG00000013761	polr3a	98	74.473	Eptatretus_burgeri
ENSOPRG00000001880	-	100	93.094	ENSEASG00005023053	POLR3A	100	93.094	Equus_asinus_asinus
ENSOPRG00000001880	-	97	92.921	ENSECAG00000019416	POLR3A	100	96.106	Equus_caballus
ENSOPRG00000001880	-	96	88.069	ENSEEUG00000001774	POLR3A	100	88.069	Erinaceus_europaeus
ENSOPRG00000001880	-	100	83.345	ENSELUG00000014016	polr3a	100	83.345	Esox_lucius
ENSOPRG00000001880	-	100	93.165	ENSFCAG00000000843	POLR3A	100	93.165	Felis_catus
ENSOPRG00000001880	-	100	90.726	ENSFALG00000006913	POLR3A	100	90.726	Ficedula_albicollis
ENSOPRG00000001880	-	100	92.302	ENSFDAG00000007813	POLR3A	100	92.302	Fukomys_damarensis
ENSOPRG00000001880	-	95	87.632	ENSFHEG00000011922	polr3a	99	87.632	Fundulus_heteroclitus
ENSOPRG00000001880	-	100	80.962	ENSGMOG00000000291	polr3a	99	80.962	Gadus_morhua
ENSOPRG00000001880	-	100	90.935	ENSGALG00000004947	POLR3A	100	90.935	Gallus_gallus
ENSOPRG00000001880	-	100	85.108	ENSGAFG00000005112	polr3a	100	85.108	Gambusia_affinis
ENSOPRG00000001880	-	100	84.532	ENSGACG00000002304	polr3a	100	84.532	Gasterosteus_aculeatus
ENSOPRG00000001880	-	92	93.760	ENSGAGG00000010386	POLR3A	96	93.760	Gopherus_agassizii
ENSOPRG00000001880	-	96	95.865	ENSGGOG00000027729	POLR3A	100	96.936	Gorilla_gorilla
ENSOPRG00000001880	-	100	84.748	ENSHBUG00000018098	polr3a	100	84.748	Haplochromis_burtoni
ENSOPRG00000001880	-	100	92.230	ENSHGLG00000017899	POLR3A	100	92.230	Heterocephalus_glaber_female
ENSOPRG00000001880	-	100	92.230	ENSHGLG00100008483	POLR3A	100	92.230	Heterocephalus_glaber_male
ENSOPRG00000001880	-	100	84.532	ENSHCOG00000001075	polr3a	100	84.532	Hippocampus_comes
ENSOPRG00000001880	-	100	93.381	ENSSTOG00000012983	POLR3A	100	93.381	Ictidomys_tridecemlineatus
ENSOPRG00000001880	-	100	85.252	ENSKMAG00000015290	polr3a	100	85.252	Kryptolebias_marmoratus
ENSOPRG00000001880	-	99	84.233	ENSLBEG00000017214	polr3a	99	84.233	Labrus_bergylta
ENSOPRG00000001880	-	97	85.428	ENSLACG00000018557	POLR3A	99	85.428	Latimeria_chalumnae
ENSOPRG00000001880	-	100	87.222	ENSLOCG00000004942	polr3a	100	87.222	Lepisosteus_oculatus
ENSOPRG00000001880	-	100	91.589	ENSLAFG00000016719	POLR3A	100	91.589	Loxodonta_africana
ENSOPRG00000001880	-	100	93.381	ENSMFAG00000032218	POLR3A	96	98.101	Macaca_fascicularis
ENSOPRG00000001880	-	100	93.381	ENSMMUG00000005514	POLR3A	98	98.101	Macaca_mulatta
ENSOPRG00000001880	-	96	89.591	ENSMNEG00000035163	POLR3A	95	95.945	Macaca_nemestrina
ENSOPRG00000001880	-	100	88.865	ENSMLEG00000030014	POLR3A	98	98.101	Mandrillus_leucophaeus
ENSOPRG00000001880	-	100	85.108	ENSMAMG00000017497	polr3a	100	85.108	Mastacembelus_armatus
ENSOPRG00000001880	-	100	84.748	ENSMZEG00005000576	polr3a	100	84.748	Maylandia_zebra
ENSOPRG00000001880	-	100	73.770	ENSMGAG00000005713	-	100	73.770	Meleagris_gallopavo
ENSOPRG00000001880	-	100	90.863	ENSMAUG00000016247	Polr3a	100	90.863	Mesocricetus_auratus
ENSOPRG00000001880	-	100	93.237	ENSMICG00000005937	POLR3A	100	96.699	Microcebus_murinus
ENSOPRG00000001880	-	100	92.878	ENSMOCG00000012185	Polr3a	100	92.878	Microtus_ochrogaster
ENSOPRG00000001880	-	100	84.964	ENSMMOG00000013822	polr3a	100	84.964	Mola_mola
ENSOPRG00000001880	-	100	91.942	ENSMODG00000001036	POLR3A	100	91.942	Monodelphis_domestica
ENSOPRG00000001880	-	100	84.604	ENSMALG00000001249	polr3a	100	84.604	Monopterus_albus
ENSOPRG00000001880	-	100	92.734	MGP_CAROLIEiJ_G0019016	Polr3a	100	92.734	Mus_caroli
ENSOPRG00000001880	-	100	92.662	ENSMUSG00000025280	Polr3a	100	92.662	Mus_musculus
ENSOPRG00000001880	-	100	92.734	MGP_PahariEiJ_G0030029	Polr3a	100	92.734	Mus_pahari
ENSOPRG00000001880	-	100	90.144	MGP_SPRETEiJ_G0019894	Polr3a	93	99.010	Mus_spretus
ENSOPRG00000001880	-	100	92.225	ENSMPUG00000003790	POLR3A	100	92.225	Mustela_putorius_furo
ENSOPRG00000001880	-	100	92.513	ENSMLUG00000011522	POLR3A	100	92.513	Myotis_lucifugus
ENSOPRG00000001880	-	100	91.223	ENSNGAG00000015863	Polr3a	100	91.223	Nannospalax_galili
ENSOPRG00000001880	-	100	83.597	ENSNBRG00000014262	polr3a	100	83.597	Neolamprologus_brichardi
ENSOPRG00000001880	-	88	88.956	ENSNLEG00000010501	POLR3A	92	88.956	Nomascus_leucogenys
ENSOPRG00000001880	-	96	82.105	ENSMEUG00000012446	POLR3A	97	82.105	Notamacropus_eugenii
ENSOPRG00000001880	-	100	90.504	ENSODEG00000015146	POLR3A	100	90.504	Octodon_degus
ENSOPRG00000001880	-	100	85.108	ENSONIG00000016129	polr3a	100	85.108	Oreochromis_niloticus
ENSOPRG00000001880	-	96	94.887	ENSOANG00000007013	POLR3A	97	94.887	Ornithorhynchus_anatinus
ENSOPRG00000001880	-	100	93.741	ENSOCUG00000012450	POLR3A	100	93.741	Oryctolagus_cuniculus
ENSOPRG00000001880	-	100	85.396	ENSORLG00000008958	polr3a	100	85.396	Oryzias_latipes
ENSOPRG00000001880	-	100	83.165	ENSORLG00020007525	polr3a	98	85.544	Oryzias_latipes_hni
ENSOPRG00000001880	-	100	85.252	ENSORLG00015006633	polr3a	100	85.252	Oryzias_latipes_hsok
ENSOPRG00000001880	-	100	84.173	ENSOMEG00000012865	polr3a	100	84.173	Oryzias_melastigma
ENSOPRG00000001880	-	100	93.022	ENSOGAG00000010995	POLR3A	100	93.022	Otolemur_garnettii
ENSOPRG00000001880	-	100	92.457	ENSOARG00000009656	POLR3A	100	92.457	Ovis_aries
ENSOPRG00000001880	-	100	93.165	ENSPPRG00000002128	POLR3A	100	93.165	Panthera_pardus
ENSOPRG00000001880	-	100	93.165	ENSPTIG00000020916	POLR3A	100	93.165	Panthera_tigris_altaica
ENSOPRG00000001880	-	100	93.381	ENSPTRG00000002664	POLR3A	98	98.101	Pan_troglodytes
ENSOPRG00000001880	-	100	93.309	ENSPANG00000022508	POLR3A	98	98.101	Papio_anubis
ENSOPRG00000001880	-	100	86.763	ENSPKIG00000008140	polr3a	100	90.158	Paramormyrops_kingsleyae
ENSOPRG00000001880	-	96	93.383	ENSPSIG00000002092	POLR3A	97	93.383	Pelodiscus_sinensis
ENSOPRG00000001880	-	100	92.878	ENSPEMG00000006768	Polr3a	100	92.878	Peromyscus_maniculatus_bairdii
ENSOPRG00000001880	-	100	92.158	ENSPCIG00000015842	POLR3A	100	92.158	Phascolarctos_cinereus
ENSOPRG00000001880	-	54	88.456	ENSPFOG00000006458	polr3a	100	88.456	Poecilia_formosa
ENSOPRG00000001880	-	100	85.180	ENSPLAG00000000997	polr3a	100	85.180	Poecilia_latipinna
ENSOPRG00000001880	-	100	85.108	ENSPMEG00000006821	polr3a	100	85.108	Poecilia_mexicana
ENSOPRG00000001880	-	100	85.108	ENSPREG00000002385	polr3a	100	85.108	Poecilia_reticulata
ENSOPRG00000001880	-	93	96.210	ENSPPYG00000002305	POLR3A	99	96.210	Pongo_abelii
ENSOPRG00000001880	-	83	93.702	ENSPCAG00000005690	POLR3A	86	93.702	Procavia_capensis
ENSOPRG00000001880	-	100	93.237	ENSPCOG00000028311	POLR3A	100	93.237	Propithecus_coquereli
ENSOPRG00000001880	-	100	92.878	ENSPVAG00000015553	POLR3A	100	92.878	Pteropus_vampyrus
ENSOPRG00000001880	-	100	84.748	ENSPNYG00000020987	polr3a	100	84.748	Pundamilia_nyererei
ENSOPRG00000001880	-	99	81.569	ENSPNAG00000006629	polr3a	99	81.569	Pygocentrus_nattereri
ENSOPRG00000001880	-	100	92.518	ENSRNOG00000010008	Polr3a	100	92.518	Rattus_norvegicus
ENSOPRG00000001880	-	100	89.065	ENSRBIG00000034967	POLR3A	98	98.101	Rhinopithecus_bieti
ENSOPRG00000001880	-	100	93.309	ENSRROG00000025527	POLR3A	98	98.101	Rhinopithecus_roxellana
ENSOPRG00000001880	-	94	50.542	YOR116C	RPO31	94	50.542	Saccharomyces_cerevisiae
ENSOPRG00000001880	-	100	93.525	ENSSBOG00000022199	POLR3A	100	93.525	Saimiri_boliviensis_boliviensis
ENSOPRG00000001880	-	100	92.014	ENSSHAG00000007588	POLR3A	94	92.014	Sarcophilus_harrisii
ENSOPRG00000001880	-	100	86.906	ENSSFOG00015014357	polr3a	100	86.906	Scleropages_formosus
ENSOPRG00000001880	-	100	84.748	ENSSMAG00000001780	polr3a	100	84.748	Scophthalmus_maximus
ENSOPRG00000001880	-	100	85.540	ENSSDUG00000019840	polr3a	100	85.540	Seriola_dumerili
ENSOPRG00000001880	-	100	85.540	ENSSLDG00000023908	polr3a	100	85.540	Seriola_lalandi_dorsalis
ENSOPRG00000001880	-	69	97.806	ENSSARG00000009916	POLR3A	89	97.806	Sorex_araneus
ENSOPRG00000001880	-	100	88.633	ENSSPUG00000013209	POLR3A	100	88.633	Sphenodon_punctatus
ENSOPRG00000001880	-	100	85.468	ENSSPAG00000017712	polr3a	100	85.468	Stegastes_partitus
ENSOPRG00000001880	-	100	92.878	ENSSSCG00000010327	POLR3A	100	96.809	Sus_scrofa
ENSOPRG00000001880	-	100	90.647	ENSTGUG00000006423	-	100	90.647	Taeniopygia_guttata
ENSOPRG00000001880	-	100	84.892	ENSTRUG00000013488	polr3a	100	84.892	Takifugu_rubripes
ENSOPRG00000001880	-	100	85.057	ENSTNIG00000013151	polr3a	100	85.057	Tetraodon_nigroviridis
ENSOPRG00000001880	-	71	97.872	ENSTBEG00000015288	POLR3A	75	97.872	Tupaia_belangeri
ENSOPRG00000001880	-	96	92.200	ENSTTRG00000007817	POLR3A	100	92.200	Tursiops_truncatus
ENSOPRG00000001880	-	100	90.504	ENSUAMG00000011283	POLR3A	100	90.504	Ursus_americanus
ENSOPRG00000001880	-	100	92.878	ENSUMAG00000013913	POLR3A	100	92.878	Ursus_maritimus
ENSOPRG00000001880	-	96	87.594	ENSVPAG00000003285	POLR3A	97	87.594	Vicugna_pacos
ENSOPRG00000001880	-	100	92.806	ENSVVUG00000025523	POLR3A	100	92.806	Vulpes_vulpes
ENSOPRG00000001880	-	86	87.135	ENSXETG00000018101	polr3a	100	87.135	Xenopus_tropicalis
ENSOPRG00000001880	-	100	85.180	ENSXMAG00000015213	polr3a	100	85.180	Xiphophorus_maculatus