EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000002300 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 3612 bases
Position: chrGeneScaffold_2115:376714-380325
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000002131	PseudoU_synth_2	PF00849.22	7.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000002304	RPUSD3-201	1053	-	ENSOPRP00000002131	351 (aa)	-	UPI0001777F08

Gene Model

Click here to download ENSOPRG00000002300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000002300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000002300	RPUSD3	99	63.506	ENSG00000156990	RPUSD3	96	64.307	Homo_sapiens
ENSOPRG00000002300	RPUSD3	98	62.319	ENSAMEG00000016227	RPUSD3	97	62.319	Ailuropoda_melanoleuca
ENSOPRG00000002300	RPUSD3	79	42.143	ENSACAG00000009836	RPUSD3	79	42.143	Anolis_carolinensis
ENSOPRG00000002300	RPUSD3	74	44.727	ENSANAG00000007127	-	93	44.727	Aotus_nancymaae
ENSOPRG00000002300	RPUSD3	95	61.446	ENSBTAG00000007968	RPUSD3	97	61.446	Bos_taurus
ENSOPRG00000002300	RPUSD3	96	63.314	ENSCAFG00000029733	RPUSD3	97	62.899	Canis_familiaris
ENSOPRG00000002300	RPUSD3	96	63.314	ENSCAFG00020008582	RPUSD3	97	62.899	Canis_lupus_dingo
ENSOPRG00000002300	RPUSD3	98	59.302	ENSCHIG00000026027	RPUSD3	100	59.302	Capra_hircus
ENSOPRG00000002300	RPUSD3	98	61.207	ENSTSYG00000009994	RPUSD3	99	61.207	Carlito_syrichta
ENSOPRG00000002300	RPUSD3	75	62.500	ENSCAPG00000017559	RPUSD3	100	62.500	Cavia_aperea
ENSOPRG00000002300	RPUSD3	75	62.264	ENSCPOG00000037956	RPUSD3	91	55.490	Cavia_porcellus
ENSOPRG00000002300	RPUSD3	94	62.840	ENSCCAG00000029530	RPUSD3	95	62.840	Cebus_capucinus
ENSOPRG00000002300	RPUSD3	96	63.018	ENSCATG00000036939	RPUSD3	95	63.018	Cercocebus_atys
ENSOPRG00000002300	RPUSD3	96	62.242	ENSCSAG00000010506	RPUSD3	96	62.242	Chlorocebus_sabaeus
ENSOPRG00000002300	RPUSD3	50	76.190	ENSCHOG00000010151	-	67	76.190	Choloepus_hoffmanni
ENSOPRG00000002300	RPUSD3	60	47.143	ENSCPBG00000008825	RPUSD3	80	47.143	Chrysemys_picta_bellii
ENSOPRG00000002300	RPUSD3	99	62.069	ENSCANG00000040711	RPUSD3	99	62.069	Colobus_angolensis_palliatus
ENSOPRG00000002300	RPUSD3	99	57.759	ENSCGRG00001004923	Rpusd3	96	57.759	Cricetulus_griseus_chok1gshd
ENSOPRG00000002300	RPUSD3	95	58.631	ENSCGRG00000018315	Rpusd3	98	58.631	Cricetulus_griseus_crigri
ENSOPRG00000002300	RPUSD3	97	59.767	ENSDNOG00000039160	RPUSD3	91	59.767	Dasypus_novemcinctus
ENSOPRG00000002300	RPUSD3	74	61.887	ENSDORG00000026827	Rpusd3	92	61.887	Dipodomys_ordii
ENSOPRG00000002300	RPUSD3	99	57.593	ENSETEG00000006538	RPUSD3	99	57.593	Echinops_telfairi
ENSOPRG00000002300	RPUSD3	58	32.039	ENSEBUG00000015605	RPUSD3	67	32.039	Eptatretus_burgeri
ENSOPRG00000002300	RPUSD3	96	62.722	ENSEASG00005014160	RPUSD3	93	62.722	Equus_asinus_asinus
ENSOPRG00000002300	RPUSD3	96	62.426	ENSECAG00000019988	RPUSD3	93	62.426	Equus_caballus
ENSOPRG00000002300	RPUSD3	96	46.491	ENSEEUG00000007353	RPUSD3	96	46.491	Erinaceus_europaeus
ENSOPRG00000002300	RPUSD3	99	63.218	ENSFCAG00000014199	RPUSD3	99	63.218	Felis_catus
ENSOPRG00000002300	RPUSD3	77	43.956	ENSFALG00000012968	RPUSD3	99	41.392	Ficedula_albicollis
ENSOPRG00000002300	RPUSD3	75	61.364	ENSFDAG00000008350	RPUSD3	81	61.364	Fukomys_damarensis
ENSOPRG00000002300	RPUSD3	61	47.907	ENSGAGG00000007493	RPUSD3	69	47.907	Gopherus_agassizii
ENSOPRG00000002300	RPUSD3	97	64.431	ENSGGOG00000013120	RPUSD3	97	64.431	Gorilla_gorilla
ENSOPRG00000002300	RPUSD3	89	58.466	ENSHGLG00000011722	RPUSD3	74	61.017	Heterocephalus_glaber_female
ENSOPRG00000002300	RPUSD3	89	58.466	ENSHGLG00100016038	RPUSD3	74	61.017	Heterocephalus_glaber_male
ENSOPRG00000002300	RPUSD3	95	60.241	ENSSTOG00000002125	RPUSD3	94	60.241	Ictidomys_tridecemlineatus
ENSOPRG00000002300	RPUSD3	95	59.337	ENSJJAG00000012679	Rpusd3	97	59.337	Jaculus_jaculus
ENSOPRG00000002300	RPUSD3	98	61.047	ENSLAFG00000017501	RPUSD3	100	61.047	Loxodonta_africana
ENSOPRG00000002300	RPUSD3	96	63.018	ENSMFAG00000032407	RPUSD3	95	63.018	Macaca_fascicularis
ENSOPRG00000002300	RPUSD3	96	58.876	ENSMMUG00000010628	RPUSD3	98	63.694	Macaca_mulatta
ENSOPRG00000002300	RPUSD3	96	63.018	ENSMNEG00000040308	RPUSD3	95	63.018	Macaca_nemestrina
ENSOPRG00000002300	RPUSD3	96	62.722	ENSMLEG00000033940	RPUSD3	95	62.722	Mandrillus_leucophaeus
ENSOPRG00000002300	RPUSD3	96	58.407	ENSMAUG00000015473	Rpusd3	99	58.407	Mesocricetus_auratus
ENSOPRG00000002300	RPUSD3	96	61.538	ENSMICG00000002315	RPUSD3	97	61.538	Microcebus_murinus
ENSOPRG00000002300	RPUSD3	94	59.215	ENSMOCG00000022613	Rpusd3	96	59.215	Microtus_ochrogaster
ENSOPRG00000002300	RPUSD3	98	46.957	ENSMODG00000005210	RPUSD3	90	46.957	Monodelphis_domestica
ENSOPRG00000002300	RPUSD3	94	57.704	MGP_CAROLIEiJ_G0028725	Rpusd3	96	57.704	Mus_caroli
ENSOPRG00000002300	RPUSD3	94	58.308	ENSMUSG00000051169	Rpusd3	96	58.308	Mus_musculus
ENSOPRG00000002300	RPUSD3	94	58.308	MGP_PahariEiJ_G0022476	Rpusd3	96	58.308	Mus_pahari
ENSOPRG00000002300	RPUSD3	94	57.704	MGP_SPRETEiJ_G0029753	Rpusd3	96	57.704	Mus_spretus
ENSOPRG00000002300	RPUSD3	96	61.538	ENSMPUG00000017132	RPUSD3	95	61.538	Mustela_putorius_furo
ENSOPRG00000002300	RPUSD3	98	62.609	ENSMLUG00000006135	RPUSD3	98	62.609	Myotis_lucifugus
ENSOPRG00000002300	RPUSD3	95	58.507	ENSNGAG00000023704	Rpusd3	98	58.507	Nannospalax_galili
ENSOPRG00000002300	RPUSD3	72	70.312	ENSNLEG00000004214	RPUSD3	82	70.312	Nomascus_leucogenys
ENSOPRG00000002300	RPUSD3	73	52.344	ENSMEUG00000013098	-	98	52.344	Notamacropus_eugenii
ENSOPRG00000002300	RPUSD3	75	62.500	ENSODEG00000018137	RPUSD3	91	62.500	Octodon_degus
ENSOPRG00000002300	RPUSD3	66	54.412	ENSOANG00000012081	-	81	54.412	Ornithorhynchus_anatinus
ENSOPRG00000002300	RPUSD3	95	57.522	ENSOCUG00000027885	RPUSD3	96	57.522	Oryctolagus_cuniculus
ENSOPRG00000002300	RPUSD3	89	62.821	ENSOGAG00000012592	RPUSD3	99	62.821	Otolemur_garnettii
ENSOPRG00000002300	RPUSD3	99	60.632	ENSOARG00000005928	RPUSD3	99	60.632	Ovis_aries
ENSOPRG00000002300	RPUSD3	96	63.529	ENSPPAG00000038083	RPUSD3	97	63.529	Pan_paniscus
ENSOPRG00000002300	RPUSD3	99	62.931	ENSPPRG00000024433	RPUSD3	99	62.931	Panthera_pardus
ENSOPRG00000002300	RPUSD3	98	63.953	ENSPTIG00000006828	RPUSD3	100	63.953	Panthera_tigris_altaica
ENSOPRG00000002300	RPUSD3	96	63.529	ENSPTRG00000051760	RPUSD3	97	63.529	Pan_troglodytes
ENSOPRG00000002300	RPUSD3	96	62.722	ENSPANG00000023885	RPUSD3	95	62.722	Papio_anubis
ENSOPRG00000002300	RPUSD3	96	58.407	ENSPEMG00000017245	Rpusd3	99	58.407	Peromyscus_maniculatus_bairdii
ENSOPRG00000002300	RPUSD3	97	46.647	ENSPCIG00000021901	RPUSD3	99	46.647	Phascolarctos_cinereus
ENSOPRG00000002300	RPUSD3	97	64.223	ENSPPYG00000013676	RPUSD3	97	64.223	Pongo_abelii
ENSOPRG00000002300	RPUSD3	81	45.263	ENSPCAG00000013731	-	99	45.263	Procavia_capensis
ENSOPRG00000002300	RPUSD3	98	62.791	ENSPCOG00000018314	RPUSD3	97	63.235	Propithecus_coquereli
ENSOPRG00000002300	RPUSD3	99	60.345	ENSPVAG00000011107	RPUSD3	99	60.345	Pteropus_vampyrus
ENSOPRG00000002300	RPUSD3	94	54.683	ENSRNOG00000009084	Rpusd3	96	54.683	Rattus_norvegicus
ENSOPRG00000002300	RPUSD3	98	63.006	ENSRBIG00000041230	RPUSD3	98	63.006	Rhinopithecus_bieti
ENSOPRG00000002300	RPUSD3	96	62.941	ENSRROG00000043328	RPUSD3	97	62.941	Rhinopithecus_roxellana
ENSOPRG00000002300	RPUSD3	94	63.444	ENSSBOG00000036106	RPUSD3	95	63.444	Saimiri_boliviensis_boliviensis
ENSOPRG00000002300	RPUSD3	88	47.573	ENSSHAG00000015536	RPUSD3	99	47.573	Sarcophilus_harrisii
ENSOPRG00000002300	RPUSD3	99	60.920	ENSSSCG00000011555	RPUSD3	99	60.920	Sus_scrofa
ENSOPRG00000002300	RPUSD3	66	45.494	ENSTGUG00000008744	RPUSD3	93	44.700	Taeniopygia_guttata
ENSOPRG00000002300	RPUSD3	78	59.273	ENSTBEG00000000176	RPUSD3	94	59.273	Tupaia_belangeri
ENSOPRG00000002300	RPUSD3	99	59.483	ENSTTRG00000007544	RPUSD3	99	59.483	Tursiops_truncatus
ENSOPRG00000002300	RPUSD3	89	62.821	ENSUAMG00000011354	RPUSD3	97	62.821	Ursus_americanus
ENSOPRG00000002300	RPUSD3	96	62.130	ENSUMAG00000018830	RPUSD3	95	62.130	Ursus_maritimus
ENSOPRG00000002300	RPUSD3	96	64.201	ENSVVUG00000023735	RPUSD3	97	64.201	Vulpes_vulpes
ENSOPRG00000002300	RPUSD3	79	39.502	ENSXETG00000023546	rpusd3	99	39.502	Xenopus_tropicalis