EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000002986 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 359416 bases
Position: chrGeneScaffold_2718:397385-756800
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000002746	CMS1	PF14617.6	1.2e-32	1	1
ENSOPRP00000002746	DEAD	PF00270.29	8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000002981	CMSS1-201	837	-	ENSOPRP00000002746	278 (aa)	-	UPI0001778DBA

Gene Model

Click here to download ENSOPRG00000002986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000002986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000002986	CMSS1	100	89.964	ENSG00000184220	CMSS1	99	95.062	Homo_sapiens
ENSOPRG00000002986	CMSS1	73	64.356	ENSAPOG00000010604	cmss1	93	59.565	Acanthochromis_polyacanthus
ENSOPRG00000002986	CMSS1	92	89.535	ENSAMEG00000004092	CMSS1	99	89.535	Ailuropoda_melanoleuca
ENSOPRG00000002986	CMSS1	73	54.455	ENSACIG00000021854	cmss1	75	54.455	Amphilophus_citrinellus
ENSOPRG00000002986	CMSS1	100	50.000	ENSAOCG00000013361	cmss1	100	53.448	Amphiprion_ocellaris
ENSOPRG00000002986	CMSS1	73	63.366	ENSAPEG00000005829	cmss1	100	53.952	Amphiprion_percula
ENSOPRG00000002986	CMSS1	100	52.218	ENSATEG00000008209	cmss1	100	54.671	Anabas_testudineus
ENSOPRG00000002986	CMSS1	82	69.565	ENSAPLG00000010542	CMSS1	100	69.565	Anas_platyrhynchos
ENSOPRG00000002986	CMSS1	84	68.908	ENSACAG00000011065	CMSS1	87	68.908	Anolis_carolinensis
ENSOPRG00000002986	CMSS1	100	90.000	ENSANAG00000023565	CMSS1	100	90.000	Aotus_nancymaae
ENSOPRG00000002986	CMSS1	100	49.834	ENSACLG00000027294	cmss1	100	51.020	Astatotilapia_calliptera
ENSOPRG00000002986	CMSS1	100	47.157	ENSAMXG00000002046	cmss1	100	47.492	Astyanax_mexicanus
ENSOPRG00000002986	CMSS1	100	88.530	ENSBTAG00000013663	CMSS1	100	89.606	Bos_taurus
ENSOPRG00000002986	CMSS1	100	91.429	ENSCJAG00000000610	CMSS1	100	91.429	Callithrix_jacchus
ENSOPRG00000002986	CMSS1	92	91.829	ENSCAFG00000009230	CMSS1	93	91.829	Canis_familiaris
ENSOPRG00000002986	CMSS1	83	84.052	ENSCAFG00020024156	-	71	84.956	Canis_lupus_dingo
ENSOPRG00000002986	CMSS1	92	91.440	ENSCAFG00020009464	-	94	91.440	Canis_lupus_dingo
ENSOPRG00000002986	CMSS1	92	89.105	ENSCHIG00000013003	CMSS1	93	89.105	Capra_hircus
ENSOPRG00000002986	CMSS1	96	85.240	ENSTSYG00000009266	CMSS1	98	88.327	Carlito_syrichta
ENSOPRG00000002986	CMSS1	80	72.368	ENSCAPG00000013584	CMSS1	87	78.010	Cavia_aperea
ENSOPRG00000002986	CMSS1	100	87.097	ENSCPOG00000014680	CMSS1	100	87.097	Cavia_porcellus
ENSOPRG00000002986	CMSS1	100	91.071	ENSCCAG00000034685	CMSS1	100	91.071	Cebus_capucinus
ENSOPRG00000002986	CMSS1	100	90.681	ENSCATG00000031980	CMSS1	100	90.681	Cercocebus_atys
ENSOPRG00000002986	CMSS1	82	92.140	ENSCLAG00000011241	CMSS1	98	92.140	Chinchilla_lanigera
ENSOPRG00000002986	CMSS1	88	91.837	ENSCSAG00000006024	CMSS1	100	91.837	Chlorocebus_sabaeus
ENSOPRG00000002986	CMSS1	100	70.144	ENSCHOG00000012098	CMSS1	100	70.144	Choloepus_hoffmanni
ENSOPRG00000002986	CMSS1	71	40.704	ENSCING00000014848	-	99	41.711	Ciona_intestinalis
ENSOPRG00000002986	CMSS1	100	90.323	ENSCANG00000031337	CMSS1	100	90.323	Colobus_angolensis_palliatus
ENSOPRG00000002986	CMSS1	100	82.734	ENSCGRG00001014305	Cmss1	100	82.734	Cricetulus_griseus_chok1gshd
ENSOPRG00000002986	CMSS1	93	83.721	ENSCGRG00000006722	Cmss1	100	83.721	Cricetulus_griseus_crigri
ENSOPRG00000002986	CMSS1	100	48.822	ENSCSEG00000004958	cmss1	100	50.495	Cynoglossus_semilaevis
ENSOPRG00000002986	CMSS1	100	51.903	ENSCVAG00000005039	cmss1	100	52.249	Cyprinodon_variegatus
ENSOPRG00000002986	CMSS1	100	47.297	ENSDARG00000112579	cmss1	100	47.603	Danio_rerio
ENSOPRG00000002986	CMSS1	94	85.496	ENSDNOG00000040418	CMSS1	92	86.434	Dasypus_novemcinctus
ENSOPRG00000002986	CMSS1	100	87.814	ENSDORG00000010461	Cmss1	100	87.814	Dipodomys_ordii
ENSOPRG00000002986	CMSS1	96	81.343	ENSEASG00005010966	CMSS1	99	92.627	Equus_asinus_asinus
ENSOPRG00000002986	CMSS1	95	87.547	ENSECAG00000015662	CMSS1	99	90.265	Equus_caballus
ENSOPRG00000002986	CMSS1	100	57.348	ENSEEUG00000007624	-	100	57.348	Erinaceus_europaeus
ENSOPRG00000002986	CMSS1	100	49.835	ENSELUG00000019459	cmss1	100	51.667	Esox_lucius
ENSOPRG00000002986	CMSS1	100	92.832	ENSFCAG00000044577	CMSS1	100	92.832	Felis_catus
ENSOPRG00000002986	CMSS1	85	64.557	ENSFALG00000005816	CMSS1	100	64.557	Ficedula_albicollis
ENSOPRG00000002986	CMSS1	82	89.912	ENSFDAG00000012577	CMSS1	100	89.912	Fukomys_damarensis
ENSOPRG00000002986	CMSS1	82	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSOPRG00000002986	CMSS1	99	50.350	ENSGMOG00000016729	cmss1	100	52.982	Gadus_morhua
ENSOPRG00000002986	CMSS1	94	65.399	ENSGALG00000015267	CMSS1	99	65.399	Gallus_gallus
ENSOPRG00000002986	CMSS1	74	63.768	ENSGAFG00000021217	cmss1	77	63.861	Gambusia_affinis
ENSOPRG00000002986	CMSS1	99	48.399	ENSGACG00000002798	cmss1	100	49.291	Gasterosteus_aculeatus
ENSOPRG00000002986	CMSS1	87	71.074	ENSGAGG00000019861	CMSS1	99	66.920	Gopherus_agassizii
ENSOPRG00000002986	CMSS1	92	91.440	ENSGGOG00000014125	CMSS1	98	91.440	Gorilla_gorilla
ENSOPRG00000002986	CMSS1	100	50.000	ENSHBUG00000008431	cmss1	100	51.195	Haplochromis_burtoni
ENSOPRG00000002986	CMSS1	91	85.771	ENSHGLG00000019481	CMSS1	100	85.771	Heterocephalus_glaber_female
ENSOPRG00000002986	CMSS1	92	85.214	ENSHGLG00100010314	CMSS1	100	85.214	Heterocephalus_glaber_male
ENSOPRG00000002986	CMSS1	100	51.186	ENSHCOG00000003222	cmss1	100	52.685	Hippocampus_comes
ENSOPRG00000002986	CMSS1	100	49.320	ENSIPUG00000011591	cmss1	100	50.685	Ictalurus_punctatus
ENSOPRG00000002986	CMSS1	100	89.964	ENSSTOG00000019366	CMSS1	100	89.964	Ictidomys_tridecemlineatus
ENSOPRG00000002986	CMSS1	100	85.305	ENSJJAG00000014894	Cmss1	100	85.305	Jaculus_jaculus
ENSOPRG00000002986	CMSS1	73	54.455	ENSKMAG00000002390	cmss1	81	54.455	Kryptolebias_marmoratus
ENSOPRG00000002986	CMSS1	73	59.606	ENSLBEG00000006298	cmss1	83	59.606	Labrus_bergylta
ENSOPRG00000002986	CMSS1	82	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSOPRG00000002986	CMSS1	100	52.297	ENSLOCG00000009391	cmss1	100	53.357	Lepisosteus_oculatus
ENSOPRG00000002986	CMSS1	82	91.228	ENSLAFG00000017509	CMSS1	100	91.228	Loxodonta_africana
ENSOPRG00000002986	CMSS1	100	91.398	ENSMFAG00000045006	CMSS1	100	91.398	Macaca_fascicularis
ENSOPRG00000002986	CMSS1	100	91.039	ENSMMUG00000002939	CMSS1	98	93.182	Macaca_mulatta
ENSOPRG00000002986	CMSS1	100	91.039	ENSMNEG00000031315	CMSS1	100	91.039	Macaca_nemestrina
ENSOPRG00000002986	CMSS1	100	91.039	ENSMLEG00000033660	CMSS1	100	91.039	Mandrillus_leucophaeus
ENSOPRG00000002986	CMSS1	100	53.041	ENSMAMG00000017176	cmss1	100	54.138	Mastacembelus_armatus
ENSOPRG00000002986	CMSS1	100	49.834	ENSMZEG00005021886	cmss1	100	51.020	Maylandia_zebra
ENSOPRG00000002986	CMSS1	82	69.298	ENSMGAG00000014360	CMSS1	100	69.298	Meleagris_gallopavo
ENSOPRG00000002986	CMSS1	100	61.511	ENSMAUG00000020609	Cmss1	100	61.511	Mesocricetus_auratus
ENSOPRG00000002986	CMSS1	100	90.647	ENSMICG00000048977	CMSS1	100	90.647	Microcebus_murinus
ENSOPRG00000002986	CMSS1	100	83.094	ENSMOCG00000021937	Cmss1	100	83.094	Microtus_ochrogaster
ENSOPRG00000002986	CMSS1	73	62.376	ENSMMOG00000019794	cmss1	84	62.376	Mola_mola
ENSOPRG00000002986	CMSS1	93	73.745	ENSMODG00000002275	CMSS1	98	73.745	Monodelphis_domestica
ENSOPRG00000002986	CMSS1	100	52.577	ENSMALG00000004250	cmss1	100	52.921	Monopterus_albus
ENSOPRG00000002986	CMSS1	100	81.362	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.362	Mus_caroli
ENSOPRG00000002986	CMSS1	100	82.437	ENSMUSG00000022748	Cmss1	100	82.437	Mus_musculus
ENSOPRG00000002986	CMSS1	100	81.362	MGP_PahariEiJ_G0016524	Cmss1	100	81.362	Mus_pahari
ENSOPRG00000002986	CMSS1	100	82.437	MGP_SPRETEiJ_G0021724	Cmss1	100	82.437	Mus_spretus
ENSOPRG00000002986	CMSS1	93	91.892	ENSMPUG00000011324	CMSS1	99	91.892	Mustela_putorius_furo
ENSOPRG00000002986	CMSS1	93	90.805	ENSMLUG00000001131	CMSS1	99	90.805	Myotis_lucifugus
ENSOPRG00000002986	CMSS1	100	85.305	ENSNGAG00000020316	Cmss1	100	85.305	Nannospalax_galili
ENSOPRG00000002986	CMSS1	100	50.171	ENSNBRG00000003095	cmss1	100	51.027	Neolamprologus_brichardi
ENSOPRG00000002986	CMSS1	100	92.115	ENSNLEG00000034172	CMSS1	100	92.115	Nomascus_leucogenys
ENSOPRG00000002986	CMSS1	82	67.105	ENSMEUG00000014505	CMSS1	100	67.105	Notamacropus_eugenii
ENSOPRG00000002986	CMSS1	100	86.380	ENSODEG00000005226	-	100	86.380	Octodon_degus
ENSOPRG00000002986	CMSS1	100	71.583	ENSODEG00000009446	-	100	71.583	Octodon_degus
ENSOPRG00000002986	CMSS1	100	76.259	ENSODEG00000001853	-	100	76.259	Octodon_degus
ENSOPRG00000002986	CMSS1	100	81.139	ENSODEG00000003558	-	100	81.139	Octodon_degus
ENSOPRG00000002986	CMSS1	73	61.386	ENSONIG00000006678	cmss1	77	61.386	Oreochromis_niloticus
ENSOPRG00000002986	CMSS1	91	72.727	ENSOANG00000007529	CMSS1	100	74.678	Ornithorhynchus_anatinus
ENSOPRG00000002986	CMSS1	92	94.942	ENSOCUG00000025366	CMSS1	93	94.942	Oryctolagus_cuniculus
ENSOPRG00000002986	CMSS1	100	52.055	ENSORLG00000020340	cmss1	100	52.740	Oryzias_latipes
ENSOPRG00000002986	CMSS1	76	56.398	ENSORLG00020012235	cmss1	85	56.931	Oryzias_latipes_hni
ENSOPRG00000002986	CMSS1	73	56.931	ENSORLG00015015551	cmss1	75	56.931	Oryzias_latipes_hsok
ENSOPRG00000002986	CMSS1	100	53.448	ENSOMEG00000012555	cmss1	100	53.952	Oryzias_melastigma
ENSOPRG00000002986	CMSS1	82	91.228	ENSOGAG00000002045	CMSS1	100	91.228	Otolemur_garnettii
ENSOPRG00000002986	CMSS1	96	86.567	ENSOARG00000017899	CMSS1	92	86.245	Ovis_aries
ENSOPRG00000002986	CMSS1	97	87.732	ENSPPAG00000038515	CMSS1	99	87.732	Pan_paniscus
ENSOPRG00000002986	CMSS1	100	92.473	ENSPPRG00000016767	CMSS1	100	92.473	Panthera_pardus
ENSOPRG00000002986	CMSS1	100	92.115	ENSPTIG00000018274	CMSS1	100	92.115	Panthera_tigris_altaica
ENSOPRG00000002986	CMSS1	100	90.323	ENSPTRG00000015157	CMSS1	100	91.429	Pan_troglodytes
ENSOPRG00000002986	CMSS1	92	88.327	ENSPANG00000019980	CMSS1	99	89.105	Papio_anubis
ENSOPRG00000002986	CMSS1	91	57.088	ENSPKIG00000012609	cmss1	97	57.308	Paramormyrops_kingsleyae
ENSOPRG00000002986	CMSS1	82	74.236	ENSPSIG00000003849	CMSS1	100	74.236	Pelodiscus_sinensis
ENSOPRG00000002986	CMSS1	73	61.576	ENSPMGG00000010286	cmss1	87	61.576	Periophthalmus_magnuspinnatus
ENSOPRG00000002986	CMSS1	100	83.214	ENSPEMG00000016384	Cmss1	100	83.214	Peromyscus_maniculatus_bairdii
ENSOPRG00000002986	CMSS1	73	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSOPRG00000002986	CMSS1	89	76.113	ENSPCIG00000015656	CMSS1	94	76.113	Phascolarctos_cinereus
ENSOPRG00000002986	CMSS1	100	52.613	ENSPFOG00000016849	cmss1	100	52.962	Poecilia_formosa
ENSOPRG00000002986	CMSS1	100	51.916	ENSPLAG00000008323	cmss1	100	52.613	Poecilia_latipinna
ENSOPRG00000002986	CMSS1	100	51.370	ENSPMEG00000021020	cmss1	100	53.287	Poecilia_mexicana
ENSOPRG00000002986	CMSS1	73	62.871	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSOPRG00000002986	CMSS1	100	90.681	ENSPPYG00000013606	CMSS1	100	90.681	Pongo_abelii
ENSOPRG00000002986	CMSS1	100	90.288	ENSPCOG00000020035	CMSS1	100	90.288	Propithecus_coquereli
ENSOPRG00000002986	CMSS1	100	80.645	ENSPVAG00000017031	CMSS1	100	80.645	Pteropus_vampyrus
ENSOPRG00000002986	CMSS1	91	50.182	ENSPNYG00000013428	cmss1	97	51.119	Pundamilia_nyererei
ENSOPRG00000002986	CMSS1	100	50.169	ENSPNAG00000007912	cmss1	100	50.847	Pygocentrus_nattereri
ENSOPRG00000002986	CMSS1	93	81.154	ENSRNOG00000027888	Cmss1	100	81.154	Rattus_norvegicus
ENSOPRG00000002986	CMSS1	100	89.606	ENSRBIG00000037931	CMSS1	100	89.606	Rhinopithecus_bieti
ENSOPRG00000002986	CMSS1	100	89.606	ENSRROG00000042910	CMSS1	100	89.606	Rhinopithecus_roxellana
ENSOPRG00000002986	CMSS1	92	91.085	ENSSBOG00000030980	CMSS1	98	91.085	Saimiri_boliviensis_boliviensis
ENSOPRG00000002986	CMSS1	89	74.206	ENSSHAG00000009321	CMSS1	99	74.206	Sarcophilus_harrisii
ENSOPRG00000002986	CMSS1	100	55.102	ENSSFOG00015001509	cmss1	100	54.138	Scleropages_formosus
ENSOPRG00000002986	CMSS1	100	53.265	ENSSMAG00000001653	cmss1	100	53.265	Scophthalmus_maximus
ENSOPRG00000002986	CMSS1	100	53.125	ENSSDUG00000007719	cmss1	100	54.639	Seriola_dumerili
ENSOPRG00000002986	CMSS1	74	62.802	ENSSLDG00000012300	cmss1	80	56.995	Seriola_lalandi_dorsalis
ENSOPRG00000002986	CMSS1	100	75.357	ENSSARG00000003584	CMSS1	100	75.357	Sorex_araneus
ENSOPRG00000002986	CMSS1	81	70.354	ENSSPUG00000003865	CMSS1	100	70.354	Sphenodon_punctatus
ENSOPRG00000002986	CMSS1	74	64.078	ENSSPAG00000019182	cmss1	63	64.356	Stegastes_partitus
ENSOPRG00000002986	CMSS1	100	92.832	ENSSSCG00000011970	CMSS1	100	92.832	Sus_scrofa
ENSOPRG00000002986	CMSS1	82	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSOPRG00000002986	CMSS1	100	51.056	ENSTRUG00000015265	cmss1	100	51.408	Takifugu_rubripes
ENSOPRG00000002986	CMSS1	73	55.446	ENSTNIG00000002880	cmss1	73	55.446	Tetraodon_nigroviridis
ENSOPRG00000002986	CMSS1	100	60.357	ENSTBEG00000016722	CMSS1	100	60.357	Tupaia_belangeri
ENSOPRG00000002986	CMSS1	100	87.814	ENSTTRG00000001562	CMSS1	100	87.814	Tursiops_truncatus
ENSOPRG00000002986	CMSS1	97	87.912	ENSUAMG00000024209	CMSS1	100	94.170	Ursus_americanus
ENSOPRG00000002986	CMSS1	92	90.272	ENSUMAG00000001983	CMSS1	99	90.272	Ursus_maritimus
ENSOPRG00000002986	CMSS1	100	68.459	ENSVPAG00000000263	CMSS1	100	68.459	Vicugna_pacos
ENSOPRG00000002986	CMSS1	81	89.823	ENSVVUG00000007776	-	89	89.823	Vulpes_vulpes
ENSOPRG00000002986	CMSS1	88	92.276	ENSVVUG00000021647	-	100	92.276	Vulpes_vulpes
ENSOPRG00000002986	CMSS1	100	57.597	ENSXETG00000011858	cmss1	100	57.597	Xenopus_tropicalis
ENSOPRG00000002986	CMSS1	75	62.981	ENSXCOG00000018724	cmss1	69	63.366	Xiphophorus_couchianus
ENSOPRG00000002986	CMSS1	75	62.981	ENSXMAG00000011243	cmss1	76	63.366	Xiphophorus_maculatus