EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000003102 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 35708 bases
Position: chrGeneScaffold_2033:130844-166551
Accession: 101528344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000002913	RRM_4	PF10598.9	1.8e-48	1	1
ENSOPRP00000002913	U5_2-snRNA_bdg	PF10597.9	3.6e-74	1	1
ENSOPRP00000002913	PRO8NT	PF08082.11	7.8e-72	1	1
ENSOPRP00000002913	U6-snRNA_bdg	PF10596.9	8.8e-90	1	1
ENSOPRP00000002913	PROCN	PF08083.11	1.5e-230	1	1
ENSOPRP00000002913	PRP8_domainIV	PF12134.8	1.8e-130	1	1
ENSOPRP00000002913	PROCT	PF08084.11	7.3e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000003171	PRPF8-201	6975	XM_004593957	ENSOPRP00000002913	2324 (aa)	XP_004594014	UPI000177753A

Gene Model

Click here to download ENSOPRG00000003102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000003102's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000003102	PRPF8	100	98.458	ENSG00000174231	PRPF8	100	98.458	Homo_sapiens
ENSOPRG00000003102	PRPF8	100	95.851	ENSAPOG00000010079	prpf8	100	96.067	Acanthochromis_polyacanthus
ENSOPRG00000003102	PRPF8	100	98.458	ENSAMEG00000007940	PRPF8	100	98.458	Ailuropoda_melanoleuca
ENSOPRG00000003102	PRPF8	100	93.811	ENSACIG00000018280	prpf8	100	94.185	Amphilophus_citrinellus
ENSOPRG00000003102	PRPF8	100	95.851	ENSAOCG00000010725	prpf8	100	96.067	Amphiprion_ocellaris
ENSOPRG00000003102	PRPF8	100	95.851	ENSAPEG00000014397	prpf8	100	96.067	Amphiprion_percula
ENSOPRG00000003102	PRPF8	100	95.509	ENSATEG00000010062	prpf8	100	95.509	Anabas_testudineus
ENSOPRG00000003102	PRPF8	96	99.244	ENSAPLG00000010357	PRPF8	100	99.244	Anas_platyrhynchos
ENSOPRG00000003102	PRPF8	83	95.675	ENSACAG00000014784	PRPF8	99	95.675	Anolis_carolinensis
ENSOPRG00000003102	PRPF8	100	98.458	ENSANAG00000032629	PRPF8	100	98.458	Aotus_nancymaae
ENSOPRG00000003102	PRPF8	99	96.525	ENSACLG00000020858	prpf8	100	95.702	Astatotilapia_calliptera
ENSOPRG00000003102	PRPF8	100	95.889	ENSAMXG00000020291	prpf8	100	95.976	Astyanax_mexicanus
ENSOPRG00000003102	PRPF8	100	98.458	ENSBTAG00000011488	PRPF8	100	98.458	Bos_taurus
ENSOPRG00000003102	PRPF8	99	85.157	WBGene00004187	prp-8	99	85.242	Caenorhabditis_elegans
ENSOPRG00000003102	PRPF8	100	98.458	ENSCJAG00000001911	PRPF8	100	98.458	Callithrix_jacchus
ENSOPRG00000003102	PRPF8	100	98.458	ENSCAFG00000019221	PRPF8	100	98.458	Canis_familiaris
ENSOPRG00000003102	PRPF8	96	99.688	ENSCAFG00020009943	PRPF8	100	99.688	Canis_lupus_dingo
ENSOPRG00000003102	PRPF8	100	98.458	ENSCHIG00000017499	PRPF8	100	98.458	Capra_hircus
ENSOPRG00000003102	PRPF8	100	98.458	ENSTSYG00000014120	PRPF8	100	98.458	Carlito_syrichta
ENSOPRG00000003102	PRPF8	96	97.461	ENSCAPG00000009459	PRPF8	99	97.461	Cavia_aperea
ENSOPRG00000003102	PRPF8	100	98.458	ENSCPOG00000010379	PRPF8	100	98.458	Cavia_porcellus
ENSOPRG00000003102	PRPF8	100	98.458	ENSCCAG00000031983	-	100	98.458	Cebus_capucinus
ENSOPRG00000003102	PRPF8	100	98.458	ENSCATG00000038595	PRPF8	100	98.458	Cercocebus_atys
ENSOPRG00000003102	PRPF8	100	98.458	ENSCLAG00000004388	PRPF8	100	98.458	Chinchilla_lanigera
ENSOPRG00000003102	PRPF8	100	98.458	ENSCSAG00000013929	PRPF8	100	98.458	Chlorocebus_sabaeus
ENSOPRG00000003102	PRPF8	81	98.000	ENSCHOG00000008590	PRPF8	88	98.000	Choloepus_hoffmanni
ENSOPRG00000003102	PRPF8	100	97.987	ENSCPBG00000020409	PRPF8	100	97.987	Chrysemys_picta_bellii
ENSOPRG00000003102	PRPF8	98	92.578	ENSCSAVG00000007825	-	100	89.844	Ciona_savignyi
ENSOPRG00000003102	PRPF8	100	98.458	ENSCANG00000043088	PRPF8	100	98.458	Colobus_angolensis_palliatus
ENSOPRG00000003102	PRPF8	74	99.533	ENSCGRG00000005129	Prpf8	100	99.533	Cricetulus_griseus_crigri
ENSOPRG00000003102	PRPF8	100	95.682	ENSCSEG00000007905	prpf8	100	95.896	Cynoglossus_semilaevis
ENSOPRG00000003102	PRPF8	100	95.730	ENSDARG00000026180	prpf8	100	95.858	Danio_rerio
ENSOPRG00000003102	PRPF8	93	98.297	ENSDNOG00000018471	PRPF8	99	98.297	Dasypus_novemcinctus
ENSOPRG00000003102	PRPF8	83	96.948	ENSDORG00000006185	Prpf8	96	96.948	Dipodomys_ordii
ENSOPRG00000003102	PRPF8	99	90.133	FBgn0033688	Prp8	98	89.714	Drosophila_melanogaster
ENSOPRG00000003102	PRPF8	100	92.976	ENSETEG00000017592	PRPF8	100	92.976	Echinops_telfairi
ENSOPRG00000003102	PRPF8	99	92.311	ENSEBUG00000006548	prpf8	99	92.311	Eptatretus_burgeri
ENSOPRG00000003102	PRPF8	100	98.458	ENSEASG00005009514	PRPF8	100	98.458	Equus_asinus_asinus
ENSOPRG00000003102	PRPF8	98	98.989	ENSECAG00000021318	PRPF8	100	98.989	Equus_caballus
ENSOPRG00000003102	PRPF8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSOPRG00000003102	PRPF8	98	94.755	ENSELUG00000007120	prpf8	99	94.755	Esox_lucius
ENSOPRG00000003102	PRPF8	100	98.458	ENSFCAG00000006297	PRPF8	100	98.458	Felis_catus
ENSOPRG00000003102	PRPF8	100	97.944	ENSFALG00000006628	PRPF8	100	97.944	Ficedula_albicollis
ENSOPRG00000003102	PRPF8	100	98.458	ENSFDAG00000004711	PRPF8	100	98.458	Fukomys_damarensis
ENSOPRG00000003102	PRPF8	100	95.524	ENSFHEG00000021084	prpf8	100	95.944	Fundulus_heteroclitus
ENSOPRG00000003102	PRPF8	100	93.655	ENSGMOG00000002028	prpf8	99	93.655	Gadus_morhua
ENSOPRG00000003102	PRPF8	100	97.901	ENSGALG00000002943	PRPF8	100	97.901	Gallus_gallus
ENSOPRG00000003102	PRPF8	99	96.547	ENSGAFG00000010337	prpf8	99	96.024	Gambusia_affinis
ENSOPRG00000003102	PRPF8	100	95.803	ENSGACG00000008504	prpf8	100	95.803	Gasterosteus_aculeatus
ENSOPRG00000003102	PRPF8	100	97.987	ENSGAGG00000008350	PRPF8	100	97.987	Gopherus_agassizii
ENSOPRG00000003102	PRPF8	100	98.458	ENSGGOG00000005516	PRPF8	100	98.458	Gorilla_gorilla
ENSOPRG00000003102	PRPF8	100	95.889	ENSHBUG00000016192	prpf8	100	95.849	Haplochromis_burtoni
ENSOPRG00000003102	PRPF8	100	98.458	ENSHGLG00000012029	PRPF8	100	98.458	Heterocephalus_glaber_female
ENSOPRG00000003102	PRPF8	100	98.458	ENSHGLG00100016494	PRPF8	100	98.458	Heterocephalus_glaber_male
ENSOPRG00000003102	PRPF8	100	95.433	ENSHCOG00000016414	prpf8	100	95.810	Hippocampus_comes
ENSOPRG00000003102	PRPF8	100	95.595	ENSIPUG00000023230	prpf8	100	95.851	Ictalurus_punctatus
ENSOPRG00000003102	PRPF8	100	98.458	ENSSTOG00000005128	PRPF8	100	98.458	Ictidomys_tridecemlineatus
ENSOPRG00000003102	PRPF8	100	96.360	ENSJJAG00000021159	Prpf8	100	96.360	Jaculus_jaculus
ENSOPRG00000003102	PRPF8	99	96.714	ENSKMAG00000016118	prpf8	99	96.470	Kryptolebias_marmoratus
ENSOPRG00000003102	PRPF8	100	95.509	ENSLBEG00000026903	prpf8	100	95.767	Labrus_bergylta
ENSOPRG00000003102	PRPF8	95	94.492	ENSLACG00000010479	PRPF8	99	98.261	Latimeria_chalumnae
ENSOPRG00000003102	PRPF8	99	96.222	ENSLOCG00000005409	prpf8	99	96.233	Lepisosteus_oculatus
ENSOPRG00000003102	PRPF8	100	98.458	ENSLAFG00000015445	PRPF8	100	98.458	Loxodonta_africana
ENSOPRG00000003102	PRPF8	100	98.458	ENSMFAG00000039995	PRPF8	100	98.458	Macaca_fascicularis
ENSOPRG00000003102	PRPF8	100	98.458	ENSMMUG00000004820	PRPF8	100	98.458	Macaca_mulatta
ENSOPRG00000003102	PRPF8	100	98.458	ENSMNEG00000035713	PRPF8	100	98.458	Macaca_nemestrina
ENSOPRG00000003102	PRPF8	100	98.458	ENSMLEG00000037937	PRPF8	100	98.458	Mandrillus_leucophaeus
ENSOPRG00000003102	PRPF8	100	95.937	ENSMAMG00000008919	prpf8	100	96.022	Mastacembelus_armatus
ENSOPRG00000003102	PRPF8	100	95.285	ENSMZEG00005015073	prpf8	100	95.702	Maylandia_zebra
ENSOPRG00000003102	PRPF8	100	97.901	ENSMGAG00000004769	PRPF8	100	97.901	Meleagris_gallopavo
ENSOPRG00000003102	PRPF8	100	98.501	ENSMICG00000010320	PRPF8	100	98.501	Microcebus_murinus
ENSOPRG00000003102	PRPF8	100	98.501	ENSMOCG00000016838	Prpf8	100	98.501	Microtus_ochrogaster
ENSOPRG00000003102	PRPF8	100	95.552	ENSMMOG00000011887	prpf8	100	95.552	Mola_mola
ENSOPRG00000003102	PRPF8	100	98.287	ENSMODG00000010480	PRPF8	100	98.287	Monodelphis_domestica
ENSOPRG00000003102	PRPF8	97	97.713	ENSMALG00000003558	prpf8	100	97.713	Monopterus_albus
ENSOPRG00000003102	PRPF8	100	98.458	MGP_CAROLIEiJ_G0016740	Prpf8	100	98.458	Mus_caroli
ENSOPRG00000003102	PRPF8	100	98.458	ENSMUSG00000020850	Prpf8	100	98.458	Mus_musculus
ENSOPRG00000003102	PRPF8	100	98.373	MGP_PahariEiJ_G0017877	Prpf8	100	98.373	Mus_pahari
ENSOPRG00000003102	PRPF8	100	98.458	MGP_SPRETEiJ_G0017583	Prpf8	100	98.458	Mus_spretus
ENSOPRG00000003102	PRPF8	100	98.458	ENSMPUG00000013227	PRPF8	100	98.458	Mustela_putorius_furo
ENSOPRG00000003102	PRPF8	100	98.289	ENSMLUG00000002666	PRPF8	100	98.289	Myotis_lucifugus
ENSOPRG00000003102	PRPF8	100	96.745	ENSNGAG00000005305	Prpf8	100	96.745	Nannospalax_galili
ENSOPRG00000003102	PRPF8	100	95.327	ENSNBRG00000013127	prpf8	100	95.745	Neolamprologus_brichardi
ENSOPRG00000003102	PRPF8	97	97.632	ENSNLEG00000000897	PRPF8	98	97.632	Nomascus_leucogenys
ENSOPRG00000003102	PRPF8	98	97.014	ENSMEUG00000015999	PRPF8	99	97.014	Notamacropus_eugenii
ENSOPRG00000003102	PRPF8	100	98.458	ENSODEG00000008468	PRPF8	100	98.458	Octodon_degus
ENSOPRG00000003102	PRPF8	100	95.370	ENSONIG00000008153	prpf8	100	95.746	Oreochromis_niloticus
ENSOPRG00000003102	PRPF8	82	99.626	ENSOANG00000004250	PRPF8	97	99.626	Ornithorhynchus_anatinus
ENSOPRG00000003102	PRPF8	100	98.458	ENSOCUG00000000081	PRPF8	100	98.458	Oryctolagus_cuniculus
ENSOPRG00000003102	PRPF8	99	96.188	ENSORLG00000008036	prpf8	99	96.188	Oryzias_latipes
ENSOPRG00000003102	PRPF8	99	96.147	ENSORLG00020021070	prpf8	99	96.147	Oryzias_latipes_hni
ENSOPRG00000003102	PRPF8	99	96.188	ENSORLG00015002340	prpf8	99	96.188	Oryzias_latipes_hsok
ENSOPRG00000003102	PRPF8	99	94.687	ENSOMEG00000016866	prpf8	99	94.687	Oryzias_melastigma
ENSOPRG00000003102	PRPF8	100	98.332	ENSOARG00000013312	PRPF8	100	98.332	Ovis_aries
ENSOPRG00000003102	PRPF8	100	98.458	ENSPPAG00000042753	PRPF8	100	98.458	Pan_paniscus
ENSOPRG00000003102	PRPF8	100	98.458	ENSPPRG00000008746	PRPF8	100	98.458	Panthera_pardus
ENSOPRG00000003102	PRPF8	100	98.373	ENSPTIG00000019200	PRPF8	100	98.373	Panthera_tigris_altaica
ENSOPRG00000003102	PRPF8	100	98.458	ENSPTRG00000039576	PRPF8	100	98.458	Pan_troglodytes
ENSOPRG00000003102	PRPF8	99	97.252	ENSPANG00000024607	PRPF8	99	97.252	Papio_anubis
ENSOPRG00000003102	PRPF8	100	95.532	ENSPKIG00000011201	prpf8	100	95.574	Paramormyrops_kingsleyae
ENSOPRG00000003102	PRPF8	100	97.944	ENSPSIG00000013393	PRPF8	100	97.944	Pelodiscus_sinensis
ENSOPRG00000003102	PRPF8	100	98.501	ENSPEMG00000021699	Prpf8	100	98.501	Peromyscus_maniculatus_bairdii
ENSOPRG00000003102	PRPF8	96	93.586	ENSPMAG00000005438	prpf8	100	93.630	Petromyzon_marinus
ENSOPRG00000003102	PRPF8	100	98.287	ENSPCIG00000022603	PRPF8	100	99.554	Phascolarctos_cinereus
ENSOPRG00000003102	PRPF8	99	96.714	ENSPFOG00000007005	prpf8	100	95.507	Poecilia_formosa
ENSOPRG00000003102	PRPF8	100	94.861	ENSPLAG00000020777	prpf8	100	94.904	Poecilia_latipinna
ENSOPRG00000003102	PRPF8	99	96.714	ENSPMEG00000004051	prpf8	100	95.507	Poecilia_mexicana
ENSOPRG00000003102	PRPF8	100	96.103	ENSPREG00000021902	prpf8	100	96.146	Poecilia_reticulata
ENSOPRG00000003102	PRPF8	100	98.458	ENSPPYG00000007777	PRPF8	100	98.458	Pongo_abelii
ENSOPRG00000003102	PRPF8	90	99.257	ENSPCAG00000008938	PRPF8	90	99.257	Procavia_capensis
ENSOPRG00000003102	PRPF8	100	98.501	ENSPCOG00000015182	PRPF8	100	98.501	Propithecus_coquereli
ENSOPRG00000003102	PRPF8	93	99.224	ENSPVAG00000002134	PRPF8	93	99.224	Pteropus_vampyrus
ENSOPRG00000003102	PRPF8	100	95.889	ENSPNYG00000016356	prpf8	100	95.849	Pundamilia_nyererei
ENSOPRG00000003102	PRPF8	100	95.894	ENSPNAG00000009247	prpf8	100	95.894	Pygocentrus_nattereri
ENSOPRG00000003102	PRPF8	100	98.458	ENSRNOG00000003495	Prpf8	100	98.458	Rattus_norvegicus
ENSOPRG00000003102	PRPF8	100	98.458	ENSRBIG00000031219	PRPF8	100	99.241	Rhinopithecus_bieti
ENSOPRG00000003102	PRPF8	100	98.458	ENSRROG00000038014	PRPF8	100	99.241	Rhinopithecus_roxellana
ENSOPRG00000003102	PRPF8	99	61.864	YHR165C	PRP8	95	61.917	Saccharomyces_cerevisiae
ENSOPRG00000003102	PRPF8	100	98.458	ENSSBOG00000029717	PRPF8	100	98.458	Saimiri_boliviensis_boliviensis
ENSOPRG00000003102	PRPF8	100	98.244	ENSSHAG00000006167	PRPF8	100	98.244	Sarcophilus_harrisii
ENSOPRG00000003102	PRPF8	100	95.773	ENSSFOG00015013905	prpf8	100	95.773	Scleropages_formosus
ENSOPRG00000003102	PRPF8	100	95.595	ENSSMAG00000017736	prpf8	100	95.643	Scophthalmus_maximus
ENSOPRG00000003102	PRPF8	100	95.730	ENSSDUG00000003029	prpf8	100	96.022	Seriola_dumerili
ENSOPRG00000003102	PRPF8	69	98.936	ENSSLDG00000017096	prpf8	100	98.936	Seriola_lalandi_dorsalis
ENSOPRG00000003102	PRPF8	87	95.570	ENSSARG00000002892	PRPF8	87	95.570	Sorex_araneus
ENSOPRG00000003102	PRPF8	100	97.773	ENSSPUG00000007463	PRPF8	100	97.773	Sphenodon_punctatus
ENSOPRG00000003102	PRPF8	100	95.468	ENSSPAG00000015639	prpf8	100	95.468	Stegastes_partitus
ENSOPRG00000003102	PRPF8	100	98.458	ENSSSCG00000017817	PRPF8	100	98.458	Sus_scrofa
ENSOPRG00000003102	PRPF8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSOPRG00000003102	PRPF8	100	97.944	ENSTGUG00000005648	-	100	97.944	Taeniopygia_guttata
ENSOPRG00000003102	PRPF8	100	95.810	ENSTRUG00000015906	prpf8	100	95.810	Takifugu_rubripes
ENSOPRG00000003102	PRPF8	95	98.746	ENSTNIG00000003460	prpf8	99	98.746	Tetraodon_nigroviridis
ENSOPRG00000003102	PRPF8	90	99.592	ENSTBEG00000006431	PRPF8	90	99.592	Tupaia_belangeri
ENSOPRG00000003102	PRPF8	100	97.859	ENSTTRG00000006869	PRPF8	100	97.859	Tursiops_truncatus
ENSOPRG00000003102	PRPF8	54	97.141	ENSUAMG00000015644	-	96	97.141	Ursus_americanus
ENSOPRG00000003102	PRPF8	100	98.201	ENSUMAG00000009385	PRPF8	100	98.201	Ursus_maritimus
ENSOPRG00000003102	PRPF8	69	100.000	ENSVPAG00000006063	-	69	100.000	Vicugna_pacos
ENSOPRG00000003102	PRPF8	100	98.458	ENSVVUG00000021695	PRPF8	99	98.458	Vulpes_vulpes
ENSOPRG00000003102	PRPF8	100	97.003	ENSXETG00000022259	prpf8	100	97.003	Xenopus_tropicalis
ENSOPRG00000003102	PRPF8	100	95.985	ENSXCOG00000012775	prpf8	100	96.072	Xiphophorus_couchianus
ENSOPRG00000003102	PRPF8	100	95.942	ENSXMAG00000008505	prpf8	100	96.029	Xiphophorus_maculatus