EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000003239 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 16233 bases
Position: chrGeneScaffold_2900:43668-59900
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000002978	RRM_1	PF00076.22	8.9e-51	1	3
ENSOPRP00000002978	RRM_1	PF00076.22	8.9e-51	2	3
ENSOPRP00000002978	RRM_1	PF00076.22	8.9e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000003245	-	1455	-	ENSOPRP00000002978	484 (aa)	-	UPI00017772D2

Gene Model

Click here to download ENSOPRG00000003239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000003239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000003239	-	69	50.230	ENSOPRG00000014415	CELF4	66	51.880
ENSOPRG00000003239	-	61	40.741	ENSOPRG00000015300	ELAVL4	72	40.741
ENSOPRG00000003239	-	54	35.065	ENSOPRG00000007373	ELAVL3	71	35.065
ENSOPRG00000003239	-	55	45.679	ENSOPRG00000009691	-	81	45.679
ENSOPRG00000003239	-	100	76.378	ENSOPRG00000011502	CELF2	99	75.591
ENSOPRG00000003239	-	97	42.010	ENSOPRG00000019169	-	68	65.152
ENSOPRG00000003239	-	69	41.975	ENSOPRG00000012874	ELAVL2	79	41.975
ENSOPRG00000003239	-	57	75.281	ENSOPRG00000011130	CELF3	51	75.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000003239	-	100	99.177	ENSG00000149187	CELF1	100	100.000	Homo_sapiens
ENSOPRG00000003239	-	100	83.773	ENSAPOG00000024000	celf1	100	84.787	Acanthochromis_polyacanthus
ENSOPRG00000003239	-	100	98.971	ENSAMEG00000007596	CELF1	95	98.971	Ailuropoda_melanoleuca
ENSOPRG00000003239	-	100	81.762	ENSACIG00000023843	celf1	100	80.533	Amphilophus_citrinellus
ENSOPRG00000003239	-	100	83.773	ENSAOCG00000001252	celf1	100	84.787	Amphiprion_ocellaris
ENSOPRG00000003239	-	100	83.976	ENSAPEG00000002340	celf1	97	84.990	Amphiprion_percula
ENSOPRG00000003239	-	100	82.752	ENSATEG00000010871	celf1	100	81.725	Anabas_testudineus
ENSOPRG00000003239	-	100	95.082	ENSACAG00000002114	CELF1	95	94.856	Anolis_carolinensis
ENSOPRG00000003239	-	100	99.177	ENSANAG00000031770	CELF1	95	99.177	Aotus_nancymaae
ENSOPRG00000003239	-	100	84.805	ENSACLG00000010181	-	95	84.805	Astatotilapia_calliptera
ENSOPRG00000003239	-	100	81.584	ENSAMXG00000020576	celf1	93	82.540	Astyanax_mexicanus
ENSOPRG00000003239	-	100	98.354	ENSBTAG00000002520	CELF1	100	98.354	Bos_taurus
ENSOPRG00000003239	-	100	98.973	ENSCJAG00000020133	CELF1	95	98.973	Callithrix_jacchus
ENSOPRG00000003239	-	100	98.765	ENSCAFG00000008452	CELF1	95	98.765	Canis_familiaris
ENSOPRG00000003239	-	100	98.765	ENSCAFG00020025487	CELF1	100	94.070	Canis_lupus_dingo
ENSOPRG00000003239	-	100	98.560	ENSCHIG00000024582	CELF1	95	98.560	Capra_hircus
ENSOPRG00000003239	-	100	99.177	ENSTSYG00000003866	CELF1	100	99.177	Carlito_syrichta
ENSOPRG00000003239	-	99	73.013	ENSCAPG00000006787	CELF1	94	73.222	Cavia_aperea
ENSOPRG00000003239	-	100	98.768	ENSCPOG00000036381	CELF1	100	98.768	Cavia_porcellus
ENSOPRG00000003239	-	100	99.177	ENSCCAG00000033487	CELF1	100	99.177	Cebus_capucinus
ENSOPRG00000003239	-	100	99.177	ENSCATG00000040143	CELF1	100	99.177	Cercocebus_atys
ENSOPRG00000003239	-	100	99.177	ENSCLAG00000011791	CELF1	95	99.177	Chinchilla_lanigera
ENSOPRG00000003239	-	100	98.971	ENSCSAG00000005786	CELF1	95	98.971	Chlorocebus_sabaeus
ENSOPRG00000003239	-	62	100.000	ENSCHOG00000004196	-	68	100.000	Choloepus_hoffmanni
ENSOPRG00000003239	-	100	96.107	ENSCPBG00000022914	CELF1	100	95.910	Chrysemys_picta_bellii
ENSOPRG00000003239	-	100	98.971	ENSCANG00000032689	CELF1	100	98.152	Colobus_angolensis_palliatus
ENSOPRG00000003239	-	100	98.560	ENSCGRG00001011274	Celf1	95	98.560	Cricetulus_griseus_chok1gshd
ENSOPRG00000003239	-	100	98.560	ENSCGRG00000015357	Celf1	95	98.560	Cricetulus_griseus_crigri
ENSOPRG00000003239	-	100	74.127	ENSCSEG00000008675	celf1	100	73.101	Cynoglossus_semilaevis
ENSOPRG00000003239	-	100	82.376	ENSDARG00000005315	celf1	100	86.982	Danio_rerio
ENSOPRG00000003239	-	100	99.177	ENSDNOG00000009523	CELF1	100	99.177	Dasypus_novemcinctus
ENSOPRG00000003239	-	100	87.860	ENSDORG00000013721	Celf1	96	87.680	Dipodomys_ordii
ENSOPRG00000003239	-	73	100.000	ENSETEG00000004507	CELF1	83	100.000	Echinops_telfairi
ENSOPRG00000003239	-	100	90.947	ENSEASG00005010831	CELF1	94	90.535	Equus_asinus_asinus
ENSOPRG00000003239	-	100	98.765	ENSECAG00000007741	CELF1	100	97.942	Equus_caballus
ENSOPRG00000003239	-	100	80.864	ENSEEUG00000009782	CELF1	100	80.864	Erinaceus_europaeus
ENSOPRG00000003239	-	100	82.752	ENSELUG00000023173	celf1	100	82.540	Esox_lucius
ENSOPRG00000003239	-	100	98.765	ENSFCAG00000002535	CELF1	100	98.765	Felis_catus
ENSOPRG00000003239	-	100	93.865	ENSFALG00000006402	CELF1	95	93.840	Ficedula_albicollis
ENSOPRG00000003239	-	100	99.177	ENSFDAG00000008517	CELF1	100	98.973	Fukomys_damarensis
ENSOPRG00000003239	-	100	82.857	ENSGMOG00000012783	celf1	98	82.245	Gadus_morhua
ENSOPRG00000003239	-	100	95.092	ENSGALG00000008097	CELF1	100	95.092	Gallus_gallus
ENSOPRG00000003239	-	100	77.976	ENSGACG00000014226	celf1	94	77.778	Gasterosteus_aculeatus
ENSOPRG00000003239	-	100	96.107	ENSGAGG00000011562	CELF1	100	95.062	Gopherus_agassizii
ENSOPRG00000003239	-	100	98.973	ENSGGOG00000004106	CELF1	95	98.973	Gorilla_gorilla
ENSOPRG00000003239	-	100	84.805	ENSHBUG00000017881	celf1	95	84.805	Haplochromis_burtoni
ENSOPRG00000003239	-	100	90.349	ENSHGLG00000019214	-	100	89.938	Heterocephalus_glaber_female
ENSOPRG00000003239	-	100	98.768	ENSHGLG00000006909	-	100	98.768	Heterocephalus_glaber_female
ENSOPRG00000003239	-	100	93.634	ENSHGLG00100017423	-	100	93.224	Heterocephalus_glaber_male
ENSOPRG00000003239	-	100	98.768	ENSHGLG00100013863	-	100	98.768	Heterocephalus_glaber_male
ENSOPRG00000003239	-	100	85.041	ENSHCOG00000000258	celf1	100	84.426	Hippocampus_comes
ENSOPRG00000003239	-	100	81.386	ENSIPUG00000023708	celf1	100	81.782	Ictalurus_punctatus
ENSOPRG00000003239	-	100	99.177	ENSSTOG00000000613	CELF1	100	98.973	Ictidomys_tridecemlineatus
ENSOPRG00000003239	-	100	98.765	ENSJJAG00000020280	Celf1	95	98.765	Jaculus_jaculus
ENSOPRG00000003239	-	70	85.251	ENSLBEG00000002047	-	98	83.481	Labrus_bergylta
ENSOPRG00000003239	-	100	85.832	ENSLBEG00000018296	celf1	93	84.615	Labrus_bergylta
ENSOPRG00000003239	-	69	78.592	ENSLACG00000018990	CELF1	85	78.886	Latimeria_chalumnae
ENSOPRG00000003239	-	100	85.857	ENSLOCG00000005966	celf1	94	86.056	Lepisosteus_oculatus
ENSOPRG00000003239	-	100	98.765	ENSLAFG00000003484	CELF1	95	98.765	Loxodonta_africana
ENSOPRG00000003239	-	100	98.973	ENSMFAG00000003505	CELF1	100	98.973	Macaca_fascicularis
ENSOPRG00000003239	-	100	98.971	ENSMMUG00000011657	CELF1	99	98.152	Macaca_mulatta
ENSOPRG00000003239	-	100	99.177	ENSMNEG00000022558	CELF1	100	99.177	Macaca_nemestrina
ENSOPRG00000003239	-	100	99.177	ENSMLEG00000040834	CELF1	100	98.152	Mandrillus_leucophaeus
ENSOPRG00000003239	-	100	82.582	ENSMAMG00000010052	celf1	100	81.148	Mastacembelus_armatus
ENSOPRG00000003239	-	100	84.805	ENSMZEG00005018307	celf1	95	84.805	Maylandia_zebra
ENSOPRG00000003239	-	100	94.898	ENSMGAG00000010629	CELF1	96	94.898	Meleagris_gallopavo
ENSOPRG00000003239	-	100	98.560	ENSMAUG00000009468	Celf1	100	98.357	Mesocricetus_auratus
ENSOPRG00000003239	-	100	98.973	ENSMICG00000045113	CELF1	95	98.973	Microcebus_murinus
ENSOPRG00000003239	-	100	98.765	ENSMOCG00000012633	Celf1	100	98.563	Microtus_ochrogaster
ENSOPRG00000003239	-	100	82.341	ENSMMOG00000015460	celf1	95	82.341	Mola_mola
ENSOPRG00000003239	-	100	97.531	ENSMODG00000019913	CELF1	100	97.531	Monodelphis_domestica
ENSOPRG00000003239	-	100	98.765	MGP_CAROLIEiJ_G0023949	Celf1	100	98.563	Mus_caroli
ENSOPRG00000003239	-	100	98.765	ENSMUSG00000005506	Celf1	100	98.765	Mus_musculus
ENSOPRG00000003239	-	100	98.765	MGP_PahariEiJ_G0025385	Celf1	100	98.765	Mus_pahari
ENSOPRG00000003239	-	100	98.560	MGP_SPRETEiJ_G0024859	Celf1	100	98.357	Mus_spretus
ENSOPRG00000003239	-	100	98.765	ENSMPUG00000003960	CELF1	88	98.765	Mustela_putorius_furo
ENSOPRG00000003239	-	100	97.755	ENSMLUG00000016631	CELF1	95	97.755	Myotis_lucifugus
ENSOPRG00000003239	-	100	97.119	ENSNGAG00000017390	Celf1	95	97.119	Nannospalax_galili
ENSOPRG00000003239	-	99	55.579	ENSNBRG00000023547	-	85	55.372	Neolamprologus_brichardi
ENSOPRG00000003239	-	100	98.971	ENSNLEG00000014638	CELF1	100	98.152	Nomascus_leucogenys
ENSOPRG00000003239	-	100	97.737	ENSMEUG00000007763	CELF1	100	97.737	Notamacropus_eugenii
ENSOPRG00000003239	-	100	99.177	ENSODEG00000015204	CELF1	95	99.177	Octodon_degus
ENSOPRG00000003239	-	100	84.189	ENSONIG00000008300	celf1	95	82.992	Oreochromis_niloticus
ENSOPRG00000003239	-	100	97.741	ENSOANG00000007896	CELF1	94	97.741	Ornithorhynchus_anatinus
ENSOPRG00000003239	-	100	99.177	ENSOCUG00000001311	CELF1	95	99.177	Oryctolagus_cuniculus
ENSOPRG00000003239	-	100	78.937	ENSOMEG00000002381	celf1	100	78.732	Oryzias_melastigma
ENSOPRG00000003239	-	100	97.959	ENSOGAG00000011600	CELF1	95	97.959	Otolemur_garnettii
ENSOPRG00000003239	-	100	98.560	ENSOARG00000006924	CELF1	100	98.560	Ovis_aries
ENSOPRG00000003239	-	100	99.177	ENSPPAG00000033870	CELF1	100	99.177	Pan_paniscus
ENSOPRG00000003239	-	100	98.765	ENSPPRG00000002376	CELF1	100	98.765	Panthera_pardus
ENSOPRG00000003239	-	100	98.765	ENSPTIG00000003974	CELF1	100	98.765	Panthera_tigris_altaica
ENSOPRG00000003239	-	100	98.973	ENSPTRG00000052299	CELF1	100	98.973	Pan_troglodytes
ENSOPRG00000003239	-	100	98.973	ENSPANG00000021676	CELF1	95	98.973	Papio_anubis
ENSOPRG00000003239	-	100	86.475	ENSPKIG00000012324	celf1	100	85.451	Paramormyrops_kingsleyae
ENSOPRG00000003239	-	100	93.047	ENSPSIG00000003922	CELF1	95	93.252	Pelodiscus_sinensis
ENSOPRG00000003239	-	100	85.652	ENSPMGG00000013192	celf1	95	76.386	Periophthalmus_magnuspinnatus
ENSOPRG00000003239	-	100	98.765	ENSPEMG00000015644	Celf1	100	98.563	Peromyscus_maniculatus_bairdii
ENSOPRG00000003239	-	100	97.531	ENSPCIG00000022947	CELF1	97	97.531	Phascolarctos_cinereus
ENSOPRG00000003239	-	70	69.822	ENSPFOG00000000961	-	100	66.864	Poecilia_formosa
ENSOPRG00000003239	-	88	70.175	ENSPLAG00000019373	-	92	61.869	Poecilia_latipinna
ENSOPRG00000003239	-	100	73.361	ENSPREG00000022185	-	94	71.193	Poecilia_reticulata
ENSOPRG00000003239	-	100	98.152	ENSPPYG00000003302	CELF1	95	98.152	Pongo_abelii
ENSOPRG00000003239	-	100	97.531	ENSPCAG00000002631	CELF1	100	97.531	Procavia_capensis
ENSOPRG00000003239	-	100	94.650	ENSPCOG00000021865	CELF1	95	94.239	Propithecus_coquereli
ENSOPRG00000003239	-	97	99.294	ENSPVAG00000007340	CELF1	99	99.294	Pteropus_vampyrus
ENSOPRG00000003239	-	78	73.810	ENSPNYG00000023719	-	87	71.429	Pundamilia_nyererei
ENSOPRG00000003239	-	100	81.818	ENSPNAG00000013418	celf1	93	82.970	Pygocentrus_nattereri
ENSOPRG00000003239	-	100	98.357	ENSRNOG00000010379	Celf1	100	98.357	Rattus_norvegicus
ENSOPRG00000003239	-	100	98.973	ENSRBIG00000042406	CELF1	95	98.973	Rhinopithecus_bieti
ENSOPRG00000003239	-	100	99.177	ENSRROG00000032588	CELF1	95	99.177	Rhinopithecus_roxellana
ENSOPRG00000003239	-	100	87.474	ENSSBOG00000021912	CELF1	94	87.474	Saimiri_boliviensis_boliviensis
ENSOPRG00000003239	-	100	97.536	ENSSHAG00000017438	CELF1	100	97.536	Sarcophilus_harrisii
ENSOPRG00000003239	-	100	87.090	ENSSFOG00015019353	celf1	93	86.475	Scleropages_formosus
ENSOPRG00000003239	-	100	85.656	ENSSMAG00000013827	celf1	93	85.656	Scophthalmus_maximus
ENSOPRG00000003239	-	100	85.451	ENSSDUG00000011558	celf1	93	85.451	Seriola_dumerili
ENSOPRG00000003239	-	100	85.656	ENSSLDG00000012863	celf1	95	85.656	Seriola_lalandi_dorsalis
ENSOPRG00000003239	-	100	92.798	ENSSARG00000003207	CELF1	100	92.798	Sorex_araneus
ENSOPRG00000003239	-	100	95.910	ENSSPUG00000004228	CELF1	95	95.910	Sphenodon_punctatus
ENSOPRG00000003239	-	100	83.773	ENSSPAG00000009569	celf1	100	84.787	Stegastes_partitus
ENSOPRG00000003239	-	100	98.765	ENSSSCG00000013233	CELF1	100	98.765	Sus_scrofa
ENSOPRG00000003239	-	100	95.697	ENSTGUG00000010377	CELF1	95	95.697	Taeniopygia_guttata
ENSOPRG00000003239	-	100	66.258	ENSTRUG00000000617	celf1	100	66.258	Takifugu_rubripes
ENSOPRG00000003239	-	83	99.338	ENSTBEG00000005140	CELF1	83	99.338	Tupaia_belangeri
ENSOPRG00000003239	-	100	98.765	ENSTTRG00000014157	CELF1	100	98.765	Tursiops_truncatus
ENSOPRG00000003239	-	90	98.624	ENSUAMG00000000223	CELF1	94	98.624	Ursus_americanus
ENSOPRG00000003239	-	100	98.765	ENSUMAG00000009218	CELF1	95	98.765	Ursus_maritimus
ENSOPRG00000003239	-	100	85.185	ENSVPAG00000000336	CELF1	100	85.185	Vicugna_pacos
ENSOPRG00000003239	-	100	98.765	ENSVVUG00000023439	CELF1	100	98.765	Vulpes_vulpes
ENSOPRG00000003239	-	100	87.525	ENSXETG00000009044	celf1	100	86.720	Xenopus_tropicalis
ENSOPRG00000003239	-	87	59.587	ENSXCOG00000017706	-	87	59.824	Xiphophorus_couchianus
ENSOPRG00000003239	-	100	72.279	ENSXMAG00000029339	-	100	71.047	Xiphophorus_maculatus