EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000003488 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 63047 bases
Position: chrGeneScaffold_4785:132-63178
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000003212	RtcB	PF01139.17	1.1e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000003498	RTCB-201	1401	-	ENSOPRP00000003212	467 (aa)	-	UPI000177854B

Gene Model

Click here to download ENSOPRG00000003488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000003488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000003488	RTCB	79	100.000	ENSG00000100220	RTCB	73	100.000	Homo_sapiens
ENSOPRG00000003488	RTCB	79	95.000	ENSAPOG00000006040	rtcb	73	95.000	Acanthochromis_polyacanthus
ENSOPRG00000003488	RTCB	79	100.000	ENSAMEG00000016152	RTCB	73	100.000	Ailuropoda_melanoleuca
ENSOPRG00000003488	RTCB	79	100.000	ENSACIG00000009083	rtcb	72	100.000	Amphilophus_citrinellus
ENSOPRG00000003488	RTCB	79	97.500	ENSAOCG00000005662	rtcb	73	97.500	Amphiprion_ocellaris
ENSOPRG00000003488	RTCB	79	97.500	ENSAPEG00000024701	rtcb	73	97.500	Amphiprion_percula
ENSOPRG00000003488	RTCB	75	97.500	ENSAPEG00000024653	rtcb	74	97.500	Amphiprion_percula
ENSOPRG00000003488	RTCB	79	97.500	ENSATEG00000000618	rtcb	73	97.500	Anabas_testudineus
ENSOPRG00000003488	RTCB	79	100.000	ENSACAG00000014817	RTCB	74	100.000	Anolis_carolinensis
ENSOPRG00000003488	RTCB	70	82.979	ENSANAG00000023724	-	74	82.979	Aotus_nancymaae
ENSOPRG00000003488	RTCB	78	87.500	ENSANAG00000018191	-	69	87.500	Aotus_nancymaae
ENSOPRG00000003488	RTCB	79	100.000	ENSACLG00000008367	rtcb	73	100.000	Astatotilapia_calliptera
ENSOPRG00000003488	RTCB	79	100.000	ENSAMXG00000042320	rtcb	73	100.000	Astyanax_mexicanus
ENSOPRG00000003488	RTCB	79	100.000	ENSBTAG00000011070	RTCB	73	100.000	Bos_taurus
ENSOPRG00000003488	RTCB	79	72.036	WBGene00008877	rtcb-1	73	72.036	Caenorhabditis_elegans
ENSOPRG00000003488	RTCB	79	100.000	ENSCJAG00000006128	RTCB	73	100.000	Callithrix_jacchus
ENSOPRG00000003488	RTCB	79	100.000	ENSCAFG00000001785	RTCB	73	100.000	Canis_familiaris
ENSOPRG00000003488	RTCB	79	93.921	ENSCAFG00000010789	-	73	93.921	Canis_familiaris
ENSOPRG00000003488	RTCB	79	100.000	ENSCAFG00020004890	-	73	100.000	Canis_lupus_dingo
ENSOPRG00000003488	RTCB	70	94.529	ENSCAFG00020018953	-	75	94.529	Canis_lupus_dingo
ENSOPRG00000003488	RTCB	79	100.000	ENSCHIG00000027009	-	73	100.000	Capra_hircus
ENSOPRG00000003488	RTCB	79	100.000	ENSTSYG00000012320	RTCB	73	100.000	Carlito_syrichta
ENSOPRG00000003488	RTCB	73	100.000	ENSCAPG00000011647	RTCB	69	100.000	Cavia_aperea
ENSOPRG00000003488	RTCB	79	100.000	ENSCCAG00000000618	RTCB	73	100.000	Cebus_capucinus
ENSOPRG00000003488	RTCB	79	100.000	ENSCATG00000033424	RTCB	73	100.000	Cercocebus_atys
ENSOPRG00000003488	RTCB	79	100.000	ENSCLAG00000007997	RTCB	73	100.000	Chinchilla_lanigera
ENSOPRG00000003488	RTCB	79	100.000	ENSCSAG00000008351	RTCB	73	100.000	Chlorocebus_sabaeus
ENSOPRG00000003488	RTCB	79	100.000	ENSCHOG00000009123	RTCB	73	100.000	Choloepus_hoffmanni
ENSOPRG00000003488	RTCB	79	100.000	ENSCPBG00000023184	RTCB	73	100.000	Chrysemys_picta_bellii
ENSOPRG00000003488	RTCB	79	85.000	ENSCING00000003830	-	73	85.000	Ciona_intestinalis
ENSOPRG00000003488	RTCB	79	85.000	ENSCSAVG00000008124	-	72	85.000	Ciona_savignyi
ENSOPRG00000003488	RTCB	79	100.000	ENSCANG00000001891	RTCB	76	100.000	Colobus_angolensis_palliatus
ENSOPRG00000003488	RTCB	79	97.872	ENSCGRG00001011173	Rtcb	73	97.872	Cricetulus_griseus_chok1gshd
ENSOPRG00000003488	RTCB	71	100.000	ENSCGRG00000009587	-	69	100.000	Cricetulus_griseus_crigri
ENSOPRG00000003488	RTCB	79	100.000	ENSCSEG00000003986	rtcb	73	100.000	Cynoglossus_semilaevis
ENSOPRG00000003488	RTCB	65	100.000	ENSCVAG00000000569	rtcb	69	100.000	Cyprinodon_variegatus
ENSOPRG00000003488	RTCB	79	100.000	ENSDARG00000101047	rtcb	73	100.000	Danio_rerio
ENSOPRG00000003488	RTCB	70	96.657	ENSDNOG00000012425	RTCB	81	96.657	Dasypus_novemcinctus
ENSOPRG00000003488	RTCB	79	100.000	ENSDORG00000010855	Rtcb	73	100.000	Dipodomys_ordii
ENSOPRG00000003488	RTCB	78	87.500	FBgn0032781	RtcB	73	87.500	Drosophila_melanogaster
ENSOPRG00000003488	RTCB	79	100.000	ENSETEG00000001988	RTCB	73	100.000	Echinops_telfairi
ENSOPRG00000003488	RTCB	79	90.000	ENSEBUG00000014235	rtcb	76	90.000	Eptatretus_burgeri
ENSOPRG00000003488	RTCB	79	100.000	ENSEASG00005019059	RTCB	73	100.000	Equus_asinus_asinus
ENSOPRG00000003488	RTCB	79	100.000	ENSECAG00000023998	RTCB	73	100.000	Equus_caballus
ENSOPRG00000003488	RTCB	58	97.048	ENSEEUG00000006251	RTCB	61	97.048	Erinaceus_europaeus
ENSOPRG00000003488	RTCB	78	97.500	ENSELUG00000009275	rtcb	71	97.500	Esox_lucius
ENSOPRG00000003488	RTCB	79	100.000	ENSFCAG00000026480	RTCB	73	100.000	Felis_catus
ENSOPRG00000003488	RTCB	79	100.000	ENSFALG00000013334	RTCB	73	100.000	Ficedula_albicollis
ENSOPRG00000003488	RTCB	79	100.000	ENSFDAG00000018150	RTCB	73	100.000	Fukomys_damarensis
ENSOPRG00000003488	RTCB	79	100.000	ENSFHEG00000009595	rtcb	73	100.000	Fundulus_heteroclitus
ENSOPRG00000003488	RTCB	79	92.500	ENSGMOG00000018882	rtcb	73	92.500	Gadus_morhua
ENSOPRG00000003488	RTCB	79	100.000	ENSGALG00000012611	RTCB	73	100.000	Gallus_gallus
ENSOPRG00000003488	RTCB	79	100.000	ENSGAFG00000004198	rtcb	73	100.000	Gambusia_affinis
ENSOPRG00000003488	RTCB	79	97.500	ENSGACG00000000586	rtcb	73	97.500	Gasterosteus_aculeatus
ENSOPRG00000003488	RTCB	79	100.000	ENSGAGG00000019133	RTCB	77	100.000	Gopherus_agassizii
ENSOPRG00000003488	RTCB	79	100.000	ENSGGOG00000011402	RTCB	73	100.000	Gorilla_gorilla
ENSOPRG00000003488	RTCB	79	100.000	ENSHBUG00000020571	rtcb	73	100.000	Haplochromis_burtoni
ENSOPRG00000003488	RTCB	62	79.239	ENSHGLG00000001066	-	65	79.239	Heterocephalus_glaber_female
ENSOPRG00000003488	RTCB	79	100.000	ENSHGLG00000004492	RTCB	73	100.000	Heterocephalus_glaber_female
ENSOPRG00000003488	RTCB	79	100.000	ENSHGLG00100008965	RTCB	73	100.000	Heterocephalus_glaber_male
ENSOPRG00000003488	RTCB	78	92.105	ENSHCOG00000006450	rtcb	72	92.105	Hippocampus_comes
ENSOPRG00000003488	RTCB	79	100.000	ENSIPUG00000015443	rtcb	73	100.000	Ictalurus_punctatus
ENSOPRG00000003488	RTCB	79	100.000	ENSSTOG00000003878	RTCB	73	100.000	Ictidomys_tridecemlineatus
ENSOPRG00000003488	RTCB	79	100.000	ENSJJAG00000010667	Rtcb	73	100.000	Jaculus_jaculus
ENSOPRG00000003488	RTCB	79	100.000	ENSKMAG00000013178	rtcb	73	100.000	Kryptolebias_marmoratus
ENSOPRG00000003488	RTCB	79	97.500	ENSLBEG00000010566	RTCB	73	97.500	Labrus_bergylta
ENSOPRG00000003488	RTCB	78	97.500	ENSLBEG00000000214	rtcb	73	97.500	Labrus_bergylta
ENSOPRG00000003488	RTCB	79	97.500	ENSLACG00000013033	RTCB	73	97.500	Latimeria_chalumnae
ENSOPRG00000003488	RTCB	79	97.500	ENSLOCG00000016515	rtcb	73	97.500	Lepisosteus_oculatus
ENSOPRG00000003488	RTCB	79	100.000	ENSLAFG00000002082	RTCB	73	100.000	Loxodonta_africana
ENSOPRG00000003488	RTCB	79	100.000	ENSMFAG00000034419	RTCB	73	100.000	Macaca_fascicularis
ENSOPRG00000003488	RTCB	79	100.000	ENSMMUG00000006720	RTCB	73	100.000	Macaca_mulatta
ENSOPRG00000003488	RTCB	79	100.000	ENSMNEG00000040669	RTCB	73	100.000	Macaca_nemestrina
ENSOPRG00000003488	RTCB	79	100.000	ENSMLEG00000040505	RTCB	73	100.000	Mandrillus_leucophaeus
ENSOPRG00000003488	RTCB	79	100.000	ENSMAMG00000020676	rtcb	73	100.000	Mastacembelus_armatus
ENSOPRG00000003488	RTCB	79	100.000	ENSMZEG00005018942	rtcb	73	100.000	Maylandia_zebra
ENSOPRG00000003488	RTCB	79	100.000	ENSMGAG00000012805	RTCB	73	100.000	Meleagris_gallopavo
ENSOPRG00000003488	RTCB	79	90.000	ENSMICG00000036677	-	70	90.000	Microcebus_murinus
ENSOPRG00000003488	RTCB	79	100.000	ENSMICG00000013303	-	73	100.000	Microcebus_murinus
ENSOPRG00000003488	RTCB	79	100.000	ENSMOCG00000002440	Rtcb	73	100.000	Microtus_ochrogaster
ENSOPRG00000003488	RTCB	79	97.500	ENSMMOG00000005987	rtcb	73	97.500	Mola_mola
ENSOPRG00000003488	RTCB	79	100.000	ENSMODG00000001414	RTCB	73	100.000	Monodelphis_domestica
ENSOPRG00000003488	RTCB	79	100.000	ENSMALG00000007603	rtcb	73	100.000	Monopterus_albus
ENSOPRG00000003488	RTCB	79	100.000	MGP_CAROLIEiJ_G0015689	Rtcb	73	100.000	Mus_caroli
ENSOPRG00000003488	RTCB	79	100.000	ENSMUSG00000001783	Rtcb	73	100.000	Mus_musculus
ENSOPRG00000003488	RTCB	79	100.000	MGP_PahariEiJ_G0031396	Rtcb	73	100.000	Mus_pahari
ENSOPRG00000003488	RTCB	79	100.000	MGP_SPRETEiJ_G0016507	Rtcb	73	100.000	Mus_spretus
ENSOPRG00000003488	RTCB	79	100.000	ENSMPUG00000012285	RTCB	73	100.000	Mustela_putorius_furo
ENSOPRG00000003488	RTCB	79	100.000	ENSMLUG00000007803	RTCB	73	100.000	Myotis_lucifugus
ENSOPRG00000003488	RTCB	71	100.000	ENSNGAG00000005093	Rtcb	90	100.000	Nannospalax_galili
ENSOPRG00000003488	RTCB	79	100.000	ENSNBRG00000017202	rtcb	73	100.000	Neolamprologus_brichardi
ENSOPRG00000003488	RTCB	79	100.000	ENSNLEG00000004960	RTCB	73	100.000	Nomascus_leucogenys
ENSOPRG00000003488	RTCB	79	100.000	ENSMEUG00000007809	-	73	100.000	Notamacropus_eugenii
ENSOPRG00000003488	RTCB	67	100.000	ENSODEG00000013033	-	82	100.000	Octodon_degus
ENSOPRG00000003488	RTCB	69	64.087	ENSODEG00000005042	-	64	64.087	Octodon_degus
ENSOPRG00000003488	RTCB	79	100.000	ENSONIG00000007474	rtcb	73	100.000	Oreochromis_niloticus
ENSOPRG00000003488	RTCB	79	100.000	ENSOANG00000005524	RTCB	73	100.000	Ornithorhynchus_anatinus
ENSOPRG00000003488	RTCB	79	100.000	ENSOCUG00000008270	RTCB	75	100.000	Oryctolagus_cuniculus
ENSOPRG00000003488	RTCB	79	100.000	ENSORLG00000020093	rtcb	73	100.000	Oryzias_latipes
ENSOPRG00000003488	RTCB	79	100.000	ENSORLG00020003706	rtcb	73	100.000	Oryzias_latipes_hni
ENSOPRG00000003488	RTCB	79	100.000	ENSORLG00015002968	rtcb	73	100.000	Oryzias_latipes_hsok
ENSOPRG00000003488	RTCB	79	100.000	ENSOMEG00000021278	rtcb	73	100.000	Oryzias_melastigma
ENSOPRG00000003488	RTCB	79	97.500	ENSOGAG00000001425	RTCB	73	97.500	Otolemur_garnettii
ENSOPRG00000003488	RTCB	79	100.000	ENSOARG00000018008	RTCB	73	100.000	Ovis_aries
ENSOPRG00000003488	RTCB	79	100.000	ENSPPAG00000028667	RTCB	73	100.000	Pan_paniscus
ENSOPRG00000003488	RTCB	79	100.000	ENSPPRG00000004038	RTCB	73	100.000	Panthera_pardus
ENSOPRG00000003488	RTCB	69	100.000	ENSPTIG00000020499	RTCB	68	100.000	Panthera_tigris_altaica
ENSOPRG00000003488	RTCB	79	100.000	ENSPTRG00000014287	RTCB	73	100.000	Pan_troglodytes
ENSOPRG00000003488	RTCB	79	100.000	ENSPANG00000016035	RTCB	73	100.000	Papio_anubis
ENSOPRG00000003488	RTCB	79	95.000	ENSPKIG00000001881	rtcb	73	95.000	Paramormyrops_kingsleyae
ENSOPRG00000003488	RTCB	69	100.000	ENSPSIG00000011690	RTCB	70	100.000	Pelodiscus_sinensis
ENSOPRG00000003488	RTCB	79	100.000	ENSPMGG00000016672	rtcb	73	100.000	Periophthalmus_magnuspinnatus
ENSOPRG00000003488	RTCB	79	100.000	ENSPEMG00000019548	Rtcb	73	100.000	Peromyscus_maniculatus_bairdii
ENSOPRG00000003488	RTCB	79	92.500	ENSPMAG00000005657	rtcb	73	92.500	Petromyzon_marinus
ENSOPRG00000003488	RTCB	79	100.000	ENSPCIG00000009467	RTCB	73	100.000	Phascolarctos_cinereus
ENSOPRG00000003488	RTCB	79	100.000	ENSPFOG00000003058	rtcb	73	100.000	Poecilia_formosa
ENSOPRG00000003488	RTCB	79	100.000	ENSPLAG00000017663	rtcb	73	100.000	Poecilia_latipinna
ENSOPRG00000003488	RTCB	79	100.000	ENSPMEG00000006227	rtcb	73	100.000	Poecilia_mexicana
ENSOPRG00000003488	RTCB	79	100.000	ENSPREG00000018467	rtcb	75	100.000	Poecilia_reticulata
ENSOPRG00000003488	RTCB	79	100.000	ENSPPYG00000011752	RTCB	73	100.000	Pongo_abelii
ENSOPRG00000003488	RTCB	73	100.000	ENSPCAG00000013641	RTCB	73	100.000	Procavia_capensis
ENSOPRG00000003488	RTCB	79	100.000	ENSPCOG00000017243	RTCB	73	100.000	Propithecus_coquereli
ENSOPRG00000003488	RTCB	79	100.000	ENSPVAG00000002380	RTCB	78	100.000	Pteropus_vampyrus
ENSOPRG00000003488	RTCB	79	100.000	ENSPNYG00000022760	rtcb	73	100.000	Pundamilia_nyererei
ENSOPRG00000003488	RTCB	79	100.000	ENSPNAG00000009209	rtcb	73	100.000	Pygocentrus_nattereri
ENSOPRG00000003488	RTCB	79	100.000	ENSRNOG00000004813	Rtcb	73	100.000	Rattus_norvegicus
ENSOPRG00000003488	RTCB	79	97.500	ENSRBIG00000042090	RTCB	72	97.500	Rhinopithecus_bieti
ENSOPRG00000003488	RTCB	79	92.705	ENSSBOG00000020085	-	73	92.705	Saimiri_boliviensis_boliviensis
ENSOPRG00000003488	RTCB	72	100.000	ENSSHAG00000016277	RTCB	71	100.000	Sarcophilus_harrisii
ENSOPRG00000003488	RTCB	79	97.500	ENSSFOG00015000763	rtcb	73	97.500	Scleropages_formosus
ENSOPRG00000003488	RTCB	79	100.000	ENSSFOG00015011572	RTCB	73	100.000	Scleropages_formosus
ENSOPRG00000003488	RTCB	79	97.500	ENSSMAG00000005096	rtcb	75	97.500	Scophthalmus_maximus
ENSOPRG00000003488	RTCB	79	97.500	ENSSDUG00000012605	rtcb	73	97.500	Seriola_dumerili
ENSOPRG00000003488	RTCB	79	97.500	ENSSLDG00000019458	rtcb	73	97.500	Seriola_lalandi_dorsalis
ENSOPRG00000003488	RTCB	63	72.148	ENSSARG00000004799	-	63	72.148	Sorex_araneus
ENSOPRG00000003488	RTCB	79	100.000	ENSSPUG00000012814	RTCB	73	100.000	Sphenodon_punctatus
ENSOPRG00000003488	RTCB	79	97.500	ENSSPAG00000004623	rtcb	73	97.500	Stegastes_partitus
ENSOPRG00000003488	RTCB	79	100.000	ENSSSCG00000000158	RTCB	73	100.000	Sus_scrofa
ENSOPRG00000003488	RTCB	79	100.000	ENSTGUG00000010947	RTCB	73	100.000	Taeniopygia_guttata
ENSOPRG00000003488	RTCB	69	97.500	ENSTRUG00000009880	rtcb	100	92.169	Takifugu_rubripes
ENSOPRG00000003488	RTCB	79	97.500	ENSTNIG00000002484	rtcb	73	97.500	Tetraodon_nigroviridis
ENSOPRG00000003488	RTCB	79	100.000	ENSTBEG00000004418	RTCB	73	100.000	Tupaia_belangeri
ENSOPRG00000003488	RTCB	79	100.000	ENSTTRG00000006417	RTCB	79	100.000	Tursiops_truncatus
ENSOPRG00000003488	RTCB	79	100.000	ENSUAMG00000022792	RTCB	73	100.000	Ursus_americanus
ENSOPRG00000003488	RTCB	79	100.000	ENSUMAG00000017225	RTCB	73	100.000	Ursus_maritimus
ENSOPRG00000003488	RTCB	79	100.000	ENSVPAG00000005375	RTCB	73	100.000	Vicugna_pacos
ENSOPRG00000003488	RTCB	79	100.000	ENSVVUG00000023408	RTCB	73	100.000	Vulpes_vulpes
ENSOPRG00000003488	RTCB	79	97.500	ENSXETG00000011523	rtcb	73	97.500	Xenopus_tropicalis
ENSOPRG00000003488	RTCB	79	100.000	ENSXMAG00000002855	rtcb	73	100.000	Xiphophorus_maculatus