EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000003607 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 12401 bases
Position: chrGeneScaffold_5134:106163-118563
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000003337	tRNA-synt_1g	PF09334.11	2.5e-11	1	1
ENSOPRP00000003337	Anticodon_1	PF08264.13	5.6e-35	1	1
ENSOPRP00000003337	tRNA-synt_1	PF00133.22	2.1e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000003630	VARS-201	3795	-	ENSOPRP00000003337	1264 (aa)	-	UPI00017783EE

Gene Model

Click here to download ENSOPRG00000003607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000003607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000003607	VARS	75	54.460	ENSOPRG00000000682	VARS2	81	69.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000003607	VARS	100	93.750	ENSG00000204394	VARS	100	93.750	Homo_sapiens
ENSOPRG00000003607	VARS	98	64.796	ENSAPOG00000020921	vars	99	64.475	Acanthochromis_polyacanthus
ENSOPRG00000003607	VARS	98	64.796	ENSAPOG00000020691	vars	99	64.475	Acanthochromis_polyacanthus
ENSOPRG00000003607	VARS	100	93.043	ENSAMEG00000006417	VARS	100	93.043	Ailuropoda_melanoleuca
ENSOPRG00000003607	VARS	100	65.882	ENSACIG00000013752	vars	100	65.566	Amphilophus_citrinellus
ENSOPRG00000003607	VARS	100	64.934	ENSAOCG00000002447	vars	100	64.280	Amphiprion_ocellaris
ENSOPRG00000003607	VARS	100	64.934	ENSAPEG00000010638	vars	99	64.875	Amphiprion_percula
ENSOPRG00000003607	VARS	100	64.854	ENSATEG00000020219	vars	100	64.618	Anabas_testudineus
ENSOPRG00000003607	VARS	90	70.139	ENSACAG00000029133	-	99	70.598	Anolis_carolinensis
ENSOPRG00000003607	VARS	100	93.987	ENSANAG00000015453	VARS	100	93.987	Aotus_nancymaae
ENSOPRG00000003607	VARS	100	65.194	ENSACLG00000025699	vars	97	64.880	Astatotilapia_calliptera
ENSOPRG00000003607	VARS	94	66.305	ENSAMXG00000017716	vars	95	66.305	Astyanax_mexicanus
ENSOPRG00000003607	VARS	100	93.513	ENSBTAG00000005631	VARS	100	93.513	Bos_taurus
ENSOPRG00000003607	VARS	100	93.908	ENSCJAG00000002604	VARS	100	93.908	Callithrix_jacchus
ENSOPRG00000003607	VARS	100	92.405	ENSCAFG00000000636	VARS	100	92.405	Canis_familiaris
ENSOPRG00000003607	VARS	94	92.736	ENSCAFG00020020790	VARS	96	92.736	Canis_lupus_dingo
ENSOPRG00000003607	VARS	100	93.592	ENSCHIG00000011008	VARS	100	93.592	Capra_hircus
ENSOPRG00000003607	VARS	100	93.750	ENSTSYG00000001567	VARS	100	93.750	Carlito_syrichta
ENSOPRG00000003607	VARS	91	91.090	ENSCAPG00000013736	VARS	99	91.090	Cavia_aperea
ENSOPRG00000003607	VARS	100	92.009	ENSCPOG00000000870	VARS	100	92.009	Cavia_porcellus
ENSOPRG00000003607	VARS	100	93.908	ENSCCAG00000035656	VARS	100	93.908	Cebus_capucinus
ENSOPRG00000003607	VARS	100	93.750	ENSCATG00000022394	VARS	100	93.750	Cercocebus_atys
ENSOPRG00000003607	VARS	89	89.351	ENSCLAG00000009470	VARS	93	89.351	Chinchilla_lanigera
ENSOPRG00000003607	VARS	100	94.066	ENSCSAG00000008784	VARS	100	94.066	Chlorocebus_sabaeus
ENSOPRG00000003607	VARS	77	74.949	ENSCPBG00000007943	VARS	96	74.846	Chrysemys_picta_bellii
ENSOPRG00000003607	VARS	100	93.987	ENSCANG00000033570	VARS	100	93.987	Colobus_angolensis_palliatus
ENSOPRG00000003607	VARS	100	93.513	ENSCGRG00001005686	Vars	100	93.513	Cricetulus_griseus_chok1gshd
ENSOPRG00000003607	VARS	92	88.610	ENSCGRG00000013352	Vars	78	88.610	Cricetulus_griseus_crigri
ENSOPRG00000003607	VARS	100	64.585	ENSCSEG00000019652	vars	100	64.427	Cynoglossus_semilaevis
ENSOPRG00000003607	VARS	100	65.423	ENSCVAG00000022398	vars	100	65.346	Cyprinodon_variegatus
ENSOPRG00000003607	VARS	100	65.349	ENSDARG00000044575	vars	100	65.268	Danio_rerio
ENSOPRG00000003607	VARS	84	92.850	ENSDORG00000016433	Vars	95	92.850	Dipodomys_ordii
ENSOPRG00000003607	VARS	69	88.065	ENSETEG00000003824	VARS	76	88.065	Echinops_telfairi
ENSOPRG00000003607	VARS	50	70.471	ENSEBUG00000007086	vars	84	69.634	Eptatretus_burgeri
ENSOPRG00000003607	VARS	57	62.363	ENSEBUG00000004637	vars	100	62.637	Eptatretus_burgeri
ENSOPRG00000003607	VARS	100	94.225	ENSEASG00005015673	VARS	100	94.225	Equus_asinus_asinus
ENSOPRG00000003607	VARS	100	93.439	ENSECAG00000014620	VARS	100	93.755	Equus_caballus
ENSOPRG00000003607	VARS	83	87.970	ENSEEUG00000004116	VARS	83	87.970	Erinaceus_europaeus
ENSOPRG00000003607	VARS	100	64.938	ENSELUG00000006550	vars	97	64.938	Esox_lucius
ENSOPRG00000003607	VARS	100	93.196	ENSFCAG00000004510	VARS	100	93.196	Felis_catus
ENSOPRG00000003607	VARS	82	92.680	ENSFDAG00000011401	VARS	100	92.680	Fukomys_damarensis
ENSOPRG00000003607	VARS	100	65.501	ENSFHEG00000010672	vars	100	65.579	Fundulus_heteroclitus
ENSOPRG00000003607	VARS	93	66.336	ENSGMOG00000014908	vars	98	66.501	Gadus_morhua
ENSOPRG00000003607	VARS	100	65.603	ENSGAFG00000021630	vars	100	65.525	Gambusia_affinis
ENSOPRG00000003607	VARS	92	66.165	ENSGACG00000009601	vars	98	66.028	Gasterosteus_aculeatus
ENSOPRG00000003607	VARS	50	64.771	ENSGAGG00000006508	-	91	64.139	Gopherus_agassizii
ENSOPRG00000003607	VARS	100	93.829	ENSGGOG00000011364	VARS	100	93.829	Gorilla_gorilla
ENSOPRG00000003607	VARS	100	65.194	ENSHBUG00000017151	vars	97	64.880	Haplochromis_burtoni
ENSOPRG00000003607	VARS	100	90.902	ENSHGLG00000011646	VARS	100	90.585	Heterocephalus_glaber_female
ENSOPRG00000003607	VARS	93	83.306	ENSHGLG00100018062	VARS	100	83.306	Heterocephalus_glaber_male
ENSOPRG00000003607	VARS	99	64.829	ENSHCOG00000012198	vars	99	64.926	Hippocampus_comes
ENSOPRG00000003607	VARS	100	65.447	ENSIPUG00000005218	vars	100	65.447	Ictalurus_punctatus
ENSOPRG00000003607	VARS	100	93.992	ENSSTOG00000013112	VARS	100	93.992	Ictidomys_tridecemlineatus
ENSOPRG00000003607	VARS	100	91.060	ENSJJAG00000019749	-	100	90.427	Jaculus_jaculus
ENSOPRG00000003607	VARS	100	71.756	ENSJJAG00000015343	-	99	72.771	Jaculus_jaculus
ENSOPRG00000003607	VARS	100	65.324	ENSKMAG00000009455	vars	100	65.008	Kryptolebias_marmoratus
ENSOPRG00000003607	VARS	100	64.534	ENSLBEG00000010341	vars	100	64.123	Labrus_bergylta
ENSOPRG00000003607	VARS	94	63.517	ENSLACG00000015232	VARS	99	63.270	Latimeria_chalumnae
ENSOPRG00000003607	VARS	100	67.684	ENSLOCG00000004240	vars	100	67.527	Lepisosteus_oculatus
ENSOPRG00000003607	VARS	100	92.405	ENSLAFG00000023090	VARS	100	91.930	Loxodonta_africana
ENSOPRG00000003607	VARS	100	94.066	ENSMFAG00000001032	VARS	100	94.066	Macaca_fascicularis
ENSOPRG00000003607	VARS	100	94.066	ENSMMUG00000006828	VARS	100	94.066	Macaca_mulatta
ENSOPRG00000003607	VARS	100	94.066	ENSMNEG00000042072	VARS	100	94.066	Macaca_nemestrina
ENSOPRG00000003607	VARS	100	93.987	ENSMLEG00000039307	VARS	100	93.987	Mandrillus_leucophaeus
ENSOPRG00000003607	VARS	100	64.880	ENSMAMG00000003949	vars	100	64.899	Mastacembelus_armatus
ENSOPRG00000003607	VARS	100	65.194	ENSMZEG00005018327	vars	100	64.720	Maylandia_zebra
ENSOPRG00000003607	VARS	100	93.275	ENSMAUG00000006715	Vars	100	93.275	Mesocricetus_auratus
ENSOPRG00000003607	VARS	100	92.722	ENSMICG00000003548	VARS	100	92.722	Microcebus_murinus
ENSOPRG00000003607	VARS	100	90.348	ENSMOCG00000015404	Vars	100	90.032	Microtus_ochrogaster
ENSOPRG00000003607	VARS	100	64.858	ENSMMOG00000015801	vars	100	64.858	Mola_mola
ENSOPRG00000003607	VARS	100	86.155	ENSMODG00000015204	-	100	86.155	Monodelphis_domestica
ENSOPRG00000003607	VARS	99	64.679	ENSMALG00000022532	vars	99	64.363	Monopterus_albus
ENSOPRG00000003607	VARS	100	93.275	MGP_CAROLIEiJ_G0021491	Vars	100	92.801	Mus_caroli
ENSOPRG00000003607	VARS	100	93.354	ENSMUSG00000007029	Vars	100	92.880	Mus_musculus
ENSOPRG00000003607	VARS	100	93.196	MGP_PahariEiJ_G0020486	Vars	100	92.801	Mus_pahari
ENSOPRG00000003607	VARS	100	93.434	MGP_SPRETEiJ_G0022396	Vars	100	92.959	Mus_spretus
ENSOPRG00000003607	VARS	100	93.196	ENSMPUG00000010821	VARS	100	93.196	Mustela_putorius_furo
ENSOPRG00000003607	VARS	78	93.016	ENSMLUG00000013126	VARS	100	93.421	Myotis_lucifugus
ENSOPRG00000003607	VARS	100	92.484	ENSNGAG00000012151	Vars	100	92.801	Nannospalax_galili
ENSOPRG00000003607	VARS	100	64.961	ENSNBRG00000020520	vars	100	64.646	Neolamprologus_brichardi
ENSOPRG00000003607	VARS	100	93.117	ENSNLEG00000006351	VARS	100	93.117	Nomascus_leucogenys
ENSOPRG00000003607	VARS	100	82.753	ENSMEUG00000011378	VARS	100	82.753	Notamacropus_eugenii
ENSOPRG00000003607	VARS	100	91.456	ENSODEG00000017681	VARS	100	90.902	Octodon_degus
ENSOPRG00000003607	VARS	100	65.833	ENSONIG00000013064	vars	99	68.348	Oreochromis_niloticus
ENSOPRG00000003607	VARS	77	78.954	ENSOANG00000005400	VARS	98	78.121	Ornithorhynchus_anatinus
ENSOPRG00000003607	VARS	100	92.891	ENSOCUG00000022463	VARS	100	93.049	Oryctolagus_cuniculus
ENSOPRG00000003607	VARS	100	64.724	ENSORLG00000013063	vars	100	64.643	Oryzias_latipes
ENSOPRG00000003607	VARS	100	65.194	ENSORLG00020003504	vars	100	65.248	Oryzias_latipes_hni
ENSOPRG00000003607	VARS	100	65.170	ENSORLG00015009001	vars	100	65.070	Oryzias_latipes_hsok
ENSOPRG00000003607	VARS	100	64.934	ENSOMEG00000015016	vars	100	64.856	Oryzias_melastigma
ENSOPRG00000003607	VARS	100	93.038	ENSOGAG00000007515	VARS	100	93.038	Otolemur_garnettii
ENSOPRG00000003607	VARS	100	93.987	ENSPPAG00000034012	VARS	100	93.987	Pan_paniscus
ENSOPRG00000003607	VARS	100	93.117	ENSPPRG00000014855	VARS	100	93.117	Panthera_pardus
ENSOPRG00000003607	VARS	85	93.866	ENSPTIG00000010462	VARS	95	93.590	Panthera_tigris_altaica
ENSOPRG00000003607	VARS	100	94.066	ENSPTRG00000017985	VARS	100	94.066	Pan_troglodytes
ENSOPRG00000003607	VARS	100	92.508	ENSPANG00000014565	VARS	100	92.508	Papio_anubis
ENSOPRG00000003607	VARS	100	63.784	ENSPKIG00000016304	vars	100	63.707	Paramormyrops_kingsleyae
ENSOPRG00000003607	VARS	100	65.852	ENSPMGG00000023909	vars	100	65.694	Periophthalmus_magnuspinnatus
ENSOPRG00000003607	VARS	100	93.829	ENSPEMG00000006639	Vars	100	93.829	Peromyscus_maniculatus_bairdii
ENSOPRG00000003607	VARS	100	85.839	ENSPCIG00000018553	VARS	100	85.839	Phascolarctos_cinereus
ENSOPRG00000003607	VARS	100	65.681	ENSPFOG00000015690	vars	100	65.603	Poecilia_formosa
ENSOPRG00000003607	VARS	100	66.247	ENSPLAG00000009590	vars	100	65.932	Poecilia_latipinna
ENSOPRG00000003607	VARS	100	65.681	ENSPMEG00000004708	vars	100	65.603	Poecilia_mexicana
ENSOPRG00000003607	VARS	100	63.858	ENSPREG00000013264	vars	100	63.686	Poecilia_reticulata
ENSOPRG00000003607	VARS	100	92.247	ENSPPYG00000016460	VARS	100	92.247	Pongo_abelii
ENSOPRG00000003607	VARS	86	90.126	ENSPCAG00000013565	VARS	86	90.126	Procavia_capensis
ENSOPRG00000003607	VARS	100	93.123	ENSPCOG00000010942	VARS	100	93.439	Propithecus_coquereli
ENSOPRG00000003607	VARS	100	89.320	ENSPVAG00000012403	VARS	100	89.320	Pteropus_vampyrus
ENSOPRG00000003607	VARS	100	65.194	ENSPNYG00000022511	vars	100	64.880	Pundamilia_nyererei
ENSOPRG00000003607	VARS	100	64.934	ENSPNAG00000020962	vars	100	64.856	Pygocentrus_nattereri
ENSOPRG00000003607	VARS	100	93.987	ENSRNOG00000000867	Vars	100	93.987	Rattus_norvegicus
ENSOPRG00000003607	VARS	100	93.987	ENSRBIG00000041669	VARS	100	93.987	Rhinopithecus_bieti
ENSOPRG00000003607	VARS	100	93.987	ENSRROG00000045490	VARS	100	93.987	Rhinopithecus_roxellana
ENSOPRG00000003607	VARS	100	93.592	ENSSBOG00000035402	VARS	100	93.592	Saimiri_boliviensis_boliviensis
ENSOPRG00000003607	VARS	100	81.540	ENSSHAG00000006937	VARS	100	81.618	Sarcophilus_harrisii
ENSOPRG00000003607	VARS	100	64.942	ENSSFOG00015014272	vars	100	64.710	Scleropages_formosus
ENSOPRG00000003607	VARS	100	63.777	ENSSMAG00000009596	vars	99	63.460	Scophthalmus_maximus
ENSOPRG00000003607	VARS	100	64.628	ENSSDUG00000014177	vars	100	64.313	Seriola_dumerili
ENSOPRG00000003607	VARS	100	64.706	ENSSLDG00000025316	vars	100	64.391	Seriola_lalandi_dorsalis
ENSOPRG00000003607	VARS	100	65.346	ENSSPAG00000017068	vars	100	65.343	Stegastes_partitus
ENSOPRG00000003607	VARS	100	92.332	ENSSSCG00000038950	VARS	100	92.648	Sus_scrofa
ENSOPRG00000003607	VARS	82	64.525	ENSTRUG00000012307	vars	98	64.374	Takifugu_rubripes
ENSOPRG00000003607	VARS	100	65.728	ENSTNIG00000008011	vars	100	65.490	Tetraodon_nigroviridis
ENSOPRG00000003607	VARS	53	97.004	ENSTBEG00000004728	-	60	97.004	Tupaia_belangeri
ENSOPRG00000003607	VARS	100	85.047	ENSTTRG00000014128	VARS	100	85.047	Tursiops_truncatus
ENSOPRG00000003607	VARS	100	89.623	ENSUAMG00000010424	VARS	100	89.623	Ursus_americanus
ENSOPRG00000003607	VARS	93	93.968	ENSUMAG00000013486	VARS	98	93.492	Ursus_maritimus
ENSOPRG00000003607	VARS	100	92.174	ENSVVUG00000021323	VARS	100	91.937	Vulpes_vulpes
ENSOPRG00000003607	VARS	96	63.622	ENSXETG00000024076	vars	98	62.864	Xenopus_tropicalis
ENSOPRG00000003607	VARS	100	65.512	ENSXCOG00000019172	vars	100	65.433	Xiphophorus_couchianus
ENSOPRG00000003607	VARS	100	65.603	ENSXMAG00000010927	vars	100	65.525	Xiphophorus_maculatus