EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000004693 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 12897 bases
Position: chrGeneScaffold_4503:26726-39622
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000004371	CPSF_A	PF03178.15	4.5e-39	1	2
ENSOPRP00000004371	CPSF_A	PF03178.15	4.5e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000004747	-	3681	-	ENSOPRP00000004371	1226 (aa)	-	UPI0001775C6E

Gene Model

Click here to download ENSOPRG00000004693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000004693's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000004693	-	71	96.939	ENSG00000071894	CPSF1	61	96.939	Homo_sapiens
ENSOPRG00000004693	-	70	89.474	ENSAPOG00000019621	cpsf1	63	89.474	Acanthochromis_polyacanthus
ENSOPRG00000004693	-	68	96.939	ENSAMEG00000005557	CPSF1	61	96.939	Ailuropoda_melanoleuca
ENSOPRG00000004693	-	70	79.612	ENSACIG00000006112	cpsf1	60	79.612	Amphilophus_citrinellus
ENSOPRG00000004693	-	70	88.421	ENSAOCG00000007120	cpsf1	60	88.421	Amphiprion_ocellaris
ENSOPRG00000004693	-	70	88.421	ENSAPEG00000005755	cpsf1	60	88.421	Amphiprion_percula
ENSOPRG00000004693	-	70	88.947	ENSATEG00000011097	cpsf1	63	88.947	Anabas_testudineus
ENSOPRG00000004693	-	59	80.132	ENSACAG00000009655	CPSF1	54	80.132	Anolis_carolinensis
ENSOPRG00000004693	-	71	97.449	ENSANAG00000036514	CPSF1	61	97.449	Aotus_nancymaae
ENSOPRG00000004693	-	70	89.474	ENSACLG00000012231	cpsf1	63	89.474	Astatotilapia_calliptera
ENSOPRG00000004693	-	66	88.148	ENSAMXG00000008485	cpsf1	59	88.148	Astyanax_mexicanus
ENSOPRG00000004693	-	71	96.939	ENSBTAG00000008355	CPSF1	65	96.939	Bos_taurus
ENSOPRG00000004693	-	57	46.409	WBGene00022301	cpsf-1	57	56.250	Caenorhabditis_elegans
ENSOPRG00000004693	-	71	97.449	ENSCJAG00000021421	CPSF1	63	97.449	Callithrix_jacchus
ENSOPRG00000004693	-	71	96.939	ENSCAFG00000001600	CPSF1	68	96.939	Canis_familiaris
ENSOPRG00000004693	-	71	96.939	ENSCAFG00020020821	CPSF1	60	96.939	Canis_lupus_dingo
ENSOPRG00000004693	-	71	86.408	ENSCHIG00000015833	CPSF1	62	86.408	Capra_hircus
ENSOPRG00000004693	-	71	96.939	ENSTSYG00000028560	CPSF1	61	96.939	Carlito_syrichta
ENSOPRG00000004693	-	71	96.429	ENSCAPG00000014921	CPSF1	63	96.429	Cavia_aperea
ENSOPRG00000004693	-	71	96.429	ENSCPOG00000011448	CPSF1	61	96.429	Cavia_porcellus
ENSOPRG00000004693	-	71	97.449	ENSCCAG00000037658	CPSF1	61	97.449	Cebus_capucinus
ENSOPRG00000004693	-	71	96.939	ENSCATG00000037234	CPSF1	61	96.939	Cercocebus_atys
ENSOPRG00000004693	-	71	96.429	ENSCLAG00000012166	CPSF1	61	96.429	Chinchilla_lanigera
ENSOPRG00000004693	-	71	96.939	ENSCSAG00000008502	CPSF1	61	96.939	Chlorocebus_sabaeus
ENSOPRG00000004693	-	69	92.063	ENSCPBG00000018910	CPSF1	57	92.063	Chrysemys_picta_bellii
ENSOPRG00000004693	-	62	54.211	ENSCING00000000514	-	55	54.211	Ciona_intestinalis
ENSOPRG00000004693	-	69	56.842	ENSCSAVG00000002293	-	62	56.842	Ciona_savignyi
ENSOPRG00000004693	-	71	96.939	ENSCANG00000032760	CPSF1	61	96.939	Colobus_angolensis_palliatus
ENSOPRG00000004693	-	71	96.939	ENSCGRG00001016344	Cpsf1	61	96.939	Cricetulus_griseus_chok1gshd
ENSOPRG00000004693	-	71	96.939	ENSCGRG00000003118	Cpsf1	60	96.939	Cricetulus_griseus_crigri
ENSOPRG00000004693	-	70	87.368	ENSCSEG00000013464	cpsf1	65	87.368	Cynoglossus_semilaevis
ENSOPRG00000004693	-	62	87.895	ENSCVAG00000014059	cpsf1	55	87.895	Cyprinodon_variegatus
ENSOPRG00000004693	-	70	88.889	ENSDARG00000034178	cpsf1	60	88.889	Danio_rerio
ENSOPRG00000004693	-	71	96.429	ENSDORG00000006278	Cpsf1	62	96.429	Dipodomys_ordii
ENSOPRG00000004693	-	71	50.000	FBgn0024698	Cpsf160	60	50.000	Drosophila_melanogaster
ENSOPRG00000004693	-	71	97.449	ENSEASG00005010774	CPSF1	60	97.449	Equus_asinus_asinus
ENSOPRG00000004693	-	71	97.449	ENSECAG00000022209	CPSF1	60	97.449	Equus_caballus
ENSOPRG00000004693	-	71	96.429	ENSEEUG00000000471	CPSF1	60	96.429	Erinaceus_europaeus
ENSOPRG00000004693	-	70	88.889	ENSELUG00000012271	cpsf1	64	88.889	Esox_lucius
ENSOPRG00000004693	-	71	96.429	ENSFDAG00000016060	CPSF1	61	96.429	Fukomys_damarensis
ENSOPRG00000004693	-	70	86.316	ENSFHEG00000016801	cpsf1	60	86.316	Fundulus_heteroclitus
ENSOPRG00000004693	-	69	85.714	ENSGMOG00000000796	cpsf1	60	85.714	Gadus_morhua
ENSOPRG00000004693	-	66	86.842	ENSGAFG00000018890	cpsf1	60	86.842	Gambusia_affinis
ENSOPRG00000004693	-	70	87.368	ENSGACG00000008703	cpsf1	61	87.368	Gasterosteus_aculeatus
ENSOPRG00000004693	-	70	92.063	ENSGAGG00000004276	CPSF1	63	92.063	Gopherus_agassizii
ENSOPRG00000004693	-	71	96.939	ENSGGOG00000016185	CPSF1	61	96.939	Gorilla_gorilla
ENSOPRG00000004693	-	70	89.474	ENSHBUG00000018900	cpsf1	60	89.474	Haplochromis_burtoni
ENSOPRG00000004693	-	71	96.429	ENSHGLG00000016139	CPSF1	61	96.429	Heterocephalus_glaber_female
ENSOPRG00000004693	-	71	96.429	ENSHGLG00100009750	CPSF1	61	96.429	Heterocephalus_glaber_male
ENSOPRG00000004693	-	70	87.895	ENSHCOG00000018509	cpsf1	62	87.895	Hippocampus_comes
ENSOPRG00000004693	-	70	79.612	ENSIPUG00000011259	cpsf1	60	79.612	Ictalurus_punctatus
ENSOPRG00000004693	-	71	96.939	ENSSTOG00000009957	CPSF1	62	96.939	Ictidomys_tridecemlineatus
ENSOPRG00000004693	-	71	96.939	ENSJJAG00000023002	Cpsf1	61	96.939	Jaculus_jaculus
ENSOPRG00000004693	-	61	92.857	ENSKMAG00000001940	cpsf1	55	92.857	Kryptolebias_marmoratus
ENSOPRG00000004693	-	70	90.000	ENSLBEG00000003601	cpsf1	61	90.000	Labrus_bergylta
ENSOPRG00000004693	-	56	87.302	ENSLACG00000000233	CPSF1	50	87.302	Latimeria_chalumnae
ENSOPRG00000004693	-	70	89.947	ENSLOCG00000008484	cpsf1	60	89.947	Lepisosteus_oculatus
ENSOPRG00000004693	-	71	96.939	ENSLAFG00000022601	CPSF1	62	96.939	Loxodonta_africana
ENSOPRG00000004693	-	71	96.939	ENSMFAG00000037013	CPSF1	61	96.939	Macaca_fascicularis
ENSOPRG00000004693	-	71	96.939	ENSMMUG00000007380	CPSF1	61	96.939	Macaca_mulatta
ENSOPRG00000004693	-	71	96.939	ENSMNEG00000043564	CPSF1	63	96.939	Macaca_nemestrina
ENSOPRG00000004693	-	71	96.939	ENSMLEG00000043010	CPSF1	61	96.939	Mandrillus_leucophaeus
ENSOPRG00000004693	-	70	90.000	ENSMAMG00000003803	cpsf1	63	90.000	Mastacembelus_armatus
ENSOPRG00000004693	-	70	89.474	ENSMZEG00005001168	cpsf1	61	89.474	Maylandia_zebra
ENSOPRG00000004693	-	71	97.449	ENSMAUG00000003601	Cpsf1	61	97.449	Mesocricetus_auratus
ENSOPRG00000004693	-	71	97.449	ENSMICG00000015767	CPSF1	61	97.449	Microcebus_murinus
ENSOPRG00000004693	-	71	96.939	ENSMOCG00000022758	Cpsf1	61	96.939	Microtus_ochrogaster
ENSOPRG00000004693	-	70	88.421	ENSMMOG00000021245	cpsf1	60	88.421	Mola_mola
ENSOPRG00000004693	-	71	96.429	ENSMODG00000010755	CPSF1	61	96.429	Monodelphis_domestica
ENSOPRG00000004693	-	70	88.947	ENSMALG00000020545	cpsf1	61	88.947	Monopterus_albus
ENSOPRG00000004693	-	71	96.939	MGP_CAROLIEiJ_G0019936	Cpsf1	61	96.939	Mus_caroli
ENSOPRG00000004693	-	71	96.939	ENSMUSG00000034022	Cpsf1	85	85.437	Mus_musculus
ENSOPRG00000004693	-	71	96.939	MGP_PahariEiJ_G0019946	Cpsf1	61	96.939	Mus_pahari
ENSOPRG00000004693	-	71	96.939	MGP_SPRETEiJ_G0020839	Cpsf1	61	96.939	Mus_spretus
ENSOPRG00000004693	-	70	96.939	ENSMPUG00000006419	CPSF1	59	96.939	Mustela_putorius_furo
ENSOPRG00000004693	-	71	96.939	ENSNGAG00000022460	Cpsf1	61	96.939	Nannospalax_galili
ENSOPRG00000004693	-	70	89.474	ENSNBRG00000000813	cpsf1	61	89.474	Neolamprologus_brichardi
ENSOPRG00000004693	-	55	74.042	ENSNLEG00000010633	-	50	86.408	Nomascus_leucogenys
ENSOPRG00000004693	-	60	93.103	ENSMEUG00000014922	CPSF1	53	93.103	Notamacropus_eugenii
ENSOPRG00000004693	-	71	96.429	ENSODEG00000013995	CPSF1	61	96.429	Octodon_degus
ENSOPRG00000004693	-	70	89.474	ENSONIG00000007676	cpsf1	60	89.474	Oreochromis_niloticus
ENSOPRG00000004693	-	70	86.772	ENSORLG00000013544	cpsf1	61	86.772	Oryzias_latipes
ENSOPRG00000004693	-	70	86.772	ENSORLG00020021693	cpsf1	61	86.772	Oryzias_latipes_hni
ENSOPRG00000004693	-	70	86.772	ENSORLG00015009979	cpsf1	61	86.772	Oryzias_latipes_hsok
ENSOPRG00000004693	-	70	84.211	ENSOMEG00000011849	cpsf1	61	84.211	Oryzias_melastigma
ENSOPRG00000004693	-	71	97.449	ENSOGAG00000000315	CPSF1	61	97.449	Otolemur_garnettii
ENSOPRG00000004693	-	71	96.939	ENSPPAG00000019280	CPSF1	61	96.939	Pan_paniscus
ENSOPRG00000004693	-	71	96.939	ENSPTRG00000051253	-	61	96.939	Pan_troglodytes
ENSOPRG00000004693	-	71	96.939	ENSPTRG00000049288	-	61	96.939	Pan_troglodytes
ENSOPRG00000004693	-	71	96.939	ENSPANG00000015005	CPSF1	63	96.939	Papio_anubis
ENSOPRG00000004693	-	70	87.831	ENSPKIG00000002582	cpsf1	66	87.831	Paramormyrops_kingsleyae
ENSOPRG00000004693	-	71	96.429	ENSPCIG00000009035	CPSF1	63	96.429	Phascolarctos_cinereus
ENSOPRG00000004693	-	70	87.368	ENSPFOG00000012870	cpsf1	61	87.368	Poecilia_formosa
ENSOPRG00000004693	-	70	87.368	ENSPREG00000016307	cpsf1	61	87.368	Poecilia_reticulata
ENSOPRG00000004693	-	69	94.798	ENSPPYG00000018973	CPSF1	59	94.798	Pongo_abelii
ENSOPRG00000004693	-	64	96.330	ENSPCAG00000011541	CPSF1	56	96.330	Procavia_capensis
ENSOPRG00000004693	-	67	98.387	ENSPCOG00000020001	CPSF1	58	98.387	Propithecus_coquereli
ENSOPRG00000004693	-	58	98.276	ENSPVAG00000006761	CPSF1	50	98.276	Pteropus_vampyrus
ENSOPRG00000004693	-	70	89.474	ENSPNYG00000004906	cpsf1	63	89.474	Pundamilia_nyererei
ENSOPRG00000004693	-	63	87.831	ENSPNAG00000024395	cpsf1	55	87.831	Pygocentrus_nattereri
ENSOPRG00000004693	-	71	96.939	ENSRNOG00000030705	Cpsf1	60	96.939	Rattus_norvegicus
ENSOPRG00000004693	-	71	96.939	ENSRBIG00000044907	CPSF1	61	96.939	Rhinopithecus_bieti
ENSOPRG00000004693	-	71	96.939	ENSRROG00000044861	CPSF1	61	96.939	Rhinopithecus_roxellana
ENSOPRG00000004693	-	71	97.449	ENSSBOG00000027177	CPSF1	63	97.449	Saimiri_boliviensis_boliviensis
ENSOPRG00000004693	-	71	95.918	ENSSHAG00000006500	CPSF1	61	95.918	Sarcophilus_harrisii
ENSOPRG00000004693	-	70	87.302	ENSSFOG00015004606	cpsf1	64	87.302	Scleropages_formosus
ENSOPRG00000004693	-	70	90.000	ENSSMAG00000020547	cpsf1	61	90.000	Scophthalmus_maximus
ENSOPRG00000004693	-	70	88.421	ENSSDUG00000001100	cpsf1	60	88.421	Seriola_dumerili
ENSOPRG00000004693	-	70	88.421	ENSSLDG00000003619	cpsf1	60	88.421	Seriola_lalandi_dorsalis
ENSOPRG00000004693	-	67	97.449	ENSSARG00000003643	CPSF1	59	97.449	Sorex_araneus
ENSOPRG00000004693	-	70	92.593	ENSSPUG00000014396	CPSF1	63	92.593	Sphenodon_punctatus
ENSOPRG00000004693	-	70	88.421	ENSSPAG00000005349	cpsf1	61	88.421	Stegastes_partitus
ENSOPRG00000004693	-	71	96.939	ENSSSCG00000005906	CPSF1	60	96.939	Sus_scrofa
ENSOPRG00000004693	-	70	87.895	ENSTRUG00000013134	cpsf1	63	87.895	Takifugu_rubripes
ENSOPRG00000004693	-	70	87.895	ENSTNIG00000014027	cpsf1	60	87.895	Tetraodon_nigroviridis
ENSOPRG00000004693	-	54	96.429	ENSTBEG00000001756	CPSF1	56	96.429	Tupaia_belangeri
ENSOPRG00000004693	-	65	97.449	ENSTTRG00000001937	CPSF1	56	97.449	Tursiops_truncatus
ENSOPRG00000004693	-	71	96.939	ENSUAMG00000006476	CPSF1	61	96.939	Ursus_americanus
ENSOPRG00000004693	-	70	87.368	ENSXCOG00000003608	cpsf1	60	87.368	Xiphophorus_couchianus
ENSOPRG00000004693	-	70	87.368	ENSXMAG00000005798	cpsf1	60	87.368	Xiphophorus_maculatus