EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000005008 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 7702 bases
Position: chrGeneScaffold_340:15406-23107
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000004603	KH_1	PF00013.29	1e-07	1	1
ENSOPRP00000004603	zf-CCHC	PF00098.23	7.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000005005	SF1-201	1488	-	ENSOPRP00000004603	495 (aa)	-	UPI00017A1FEB

Gene Model

Click here to download ENSOPRG00000005008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000005008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000005008	SF1	66	82.335	ENSAPOG00000012341	sf1	53	77.748	Acanthochromis_polyacanthus
ENSOPRG00000005008	SF1	96	98.947	ENSAMEG00000017828	SF1	74	98.947	Ailuropoda_melanoleuca
ENSOPRG00000005008	SF1	66	81.737	ENSAOCG00000010934	sf1	53	76.676	Amphiprion_ocellaris
ENSOPRG00000005008	SF1	66	81.737	ENSAPEG00000009498	sf1	53	76.676	Amphiprion_percula
ENSOPRG00000005008	SF1	100	99.192	ENSANAG00000026664	-	87	99.192	Aotus_nancymaae
ENSOPRG00000005008	SF1	96	88.161	ENSANAG00000022607	-	81	92.547	Aotus_nancymaae
ENSOPRG00000005008	SF1	66	84.802	ENSACLG00000007633	sf1	55	77.454	Astatotilapia_calliptera
ENSOPRG00000005008	SF1	96	99.158	ENSBTAG00000001035	SF1	74	99.158	Bos_taurus
ENSOPRG00000005008	SF1	100	99.394	ENSCJAG00000002780	SF1	74	99.158	Callithrix_jacchus
ENSOPRG00000005008	SF1	96	99.158	ENSCAFG00000014239	SF1	74	99.158	Canis_familiaris
ENSOPRG00000005008	SF1	96	99.158	ENSCAFG00020014381	SF1	74	99.158	Canis_lupus_dingo
ENSOPRG00000005008	SF1	100	99.394	ENSCHIG00000025867	SF1	90	99.394	Capra_hircus
ENSOPRG00000005008	SF1	53	99.574	ENSTSYG00000033618	SF1	75	99.574	Carlito_syrichta
ENSOPRG00000005008	SF1	80	97.985	ENSCAPG00000010762	SF1	71	97.985	Cavia_aperea
ENSOPRG00000005008	SF1	100	98.990	ENSCPOG00000012290	SF1	92	98.990	Cavia_porcellus
ENSOPRG00000005008	SF1	100	99.394	ENSCCAG00000037881	SF1	83	99.433	Cebus_capucinus
ENSOPRG00000005008	SF1	96	84.144	ENSCCAG00000023781	-	79	87.255	Cebus_capucinus
ENSOPRG00000005008	SF1	96	99.158	ENSCATG00000011564	SF1	95	98.319	Cercocebus_atys
ENSOPRG00000005008	SF1	100	99.394	ENSCSAG00000007258	SF1	90	99.394	Chlorocebus_sabaeus
ENSOPRG00000005008	SF1	74	99.457	ENSCHOG00000006008	SF1	69	99.457	Choloepus_hoffmanni
ENSOPRG00000005008	SF1	99	83.811	ENSCPBG00000023763	SF1	60	84.355	Chrysemys_picta_bellii
ENSOPRG00000005008	SF1	54	68.978	ENSCING00000005564	-	64	62.617	Ciona_intestinalis
ENSOPRG00000005008	SF1	96	53.542	ENSCSAVG00000009055	-	50	68.750	Ciona_savignyi
ENSOPRG00000005008	SF1	96	99.158	ENSCANG00000042201	SF1	78	99.692	Colobus_angolensis_palliatus
ENSOPRG00000005008	SF1	96	98.526	ENSCGRG00001003677	Sf1	74	98.526	Cricetulus_griseus_chok1gshd
ENSOPRG00000005008	SF1	100	98.586	ENSCGRG00000001708	Sf1	91	98.586	Cricetulus_griseus_crigri
ENSOPRG00000005008	SF1	66	85.538	ENSCVAG00000001670	sf1	56	79.396	Cyprinodon_variegatus
ENSOPRG00000005008	SF1	69	81.089	ENSDARG00000008188	sf1	62	77.867	Danio_rerio
ENSOPRG00000005008	SF1	100	99.394	ENSDNOG00000001282	SF1	90	99.394	Dasypus_novemcinctus
ENSOPRG00000005008	SF1	96	99.158	ENSDORG00000016334	Sf1	74	99.158	Dipodomys_ordii
ENSOPRG00000005008	SF1	96	90.698	ENSETEG00000012830	SF1	66	89.053	Echinops_telfairi
ENSOPRG00000005008	SF1	100	98.990	ENSEASG00005018272	SF1	90	98.990	Equus_asinus_asinus
ENSOPRG00000005008	SF1	100	99.192	ENSECAG00000024544	SF1	90	99.192	Equus_caballus
ENSOPRG00000005008	SF1	79	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSOPRG00000005008	SF1	100	99.394	ENSFCAG00000012231	SF1	74	99.394	Felis_catus
ENSOPRG00000005008	SF1	96	96.406	ENSFDAG00000009833	SF1	74	96.406	Fukomys_damarensis
ENSOPRG00000005008	SF1	66	82.090	ENSFHEG00000022656	sf1	53	76.720	Fundulus_heteroclitus
ENSOPRG00000005008	SF1	56	89.474	ENSGMOG00000007469	sf1	52	88.542	Gadus_morhua
ENSOPRG00000005008	SF1	66	85.196	ENSGAFG00000019284	sf1	68	81.148	Gambusia_affinis
ENSOPRG00000005008	SF1	67	80.588	ENSGACG00000000826	sf1	59	76.230	Gasterosteus_aculeatus
ENSOPRG00000005008	SF1	83	88.564	ENSGAGG00000021691	SF1	65	84.567	Gopherus_agassizii
ENSOPRG00000005008	SF1	96	99.158	ENSHGLG00000009541	SF1	74	99.158	Heterocephalus_glaber_female
ENSOPRG00000005008	SF1	82	90.047	ENSHGLG00100008255	-	87	89.573	Heterocephalus_glaber_male
ENSOPRG00000005008	SF1	84	88.702	ENSHGLG00100008076	-	83	86.441	Heterocephalus_glaber_male
ENSOPRG00000005008	SF1	96	96.406	ENSHGLG00100013879	-	89	96.025	Heterocephalus_glaber_male
ENSOPRG00000005008	SF1	67	81.525	ENSHCOG00000011388	sf1	52	76.676	Hippocampus_comes
ENSOPRG00000005008	SF1	96	99.158	ENSSTOG00000009790	-	76	99.158	Ictidomys_tridecemlineatus
ENSOPRG00000005008	SF1	89	94.582	ENSSTOG00000024353	-	71	94.582	Ictidomys_tridecemlineatus
ENSOPRG00000005008	SF1	96	98.947	ENSJJAG00000011788	Sf1	74	98.947	Jaculus_jaculus
ENSOPRG00000005008	SF1	74	79.784	ENSLACG00000018493	SF1	61	83.768	Latimeria_chalumnae
ENSOPRG00000005008	SF1	66	85.455	ENSLOCG00000002130	sf1	52	79.558	Lepisosteus_oculatus
ENSOPRG00000005008	SF1	96	98.737	ENSLAFG00000007201	SF1	74	98.737	Loxodonta_africana
ENSOPRG00000005008	SF1	96	99.158	ENSMFAG00000033122	SF1	94	98.319	Macaca_fascicularis
ENSOPRG00000005008	SF1	100	99.394	ENSMMUG00000022606	SF1	90	99.394	Macaca_mulatta
ENSOPRG00000005008	SF1	100	98.400	ENSMNEG00000037901	SF1	94	98.319	Macaca_nemestrina
ENSOPRG00000005008	SF1	96	99.158	ENSMLEG00000040706	SF1	94	98.319	Mandrillus_leucophaeus
ENSOPRG00000005008	SF1	96	98.526	ENSMAUG00000014064	Sf1	74	98.526	Mesocricetus_auratus
ENSOPRG00000005008	SF1	100	99.394	ENSMICG00000001202	SF1	83	99.153	Microcebus_murinus
ENSOPRG00000005008	SF1	96	98.316	ENSMOCG00000022038	Sf1	74	98.316	Microtus_ochrogaster
ENSOPRG00000005008	SF1	66	82.569	ENSMMOG00000020474	sf1	53	76.503	Mola_mola
ENSOPRG00000005008	SF1	81	93.781	ENSMODG00000029407	SF1	87	93.781	Monodelphis_domestica
ENSOPRG00000005008	SF1	66	84.308	ENSMALG00000020521	sf1	60	78.297	Monopterus_albus
ENSOPRG00000005008	SF1	100	98.788	MGP_CAROLIEiJ_G0022607	Sf1	90	99.582	Mus_caroli
ENSOPRG00000005008	SF1	100	98.788	ENSMUSG00000024949	Sf1	90	99.582	Mus_musculus
ENSOPRG00000005008	SF1	100	98.788	MGP_PahariEiJ_G0014101	Sf1	90	99.582	Mus_pahari
ENSOPRG00000005008	SF1	100	98.788	MGP_SPRETEiJ_G0023518	Sf1	90	99.582	Mus_spretus
ENSOPRG00000005008	SF1	96	99.368	ENSMPUG00000012684	SF1	74	99.368	Mustela_putorius_furo
ENSOPRG00000005008	SF1	81	93.797	ENSMLUG00000029800	-	69	94.250	Myotis_lucifugus
ENSOPRG00000005008	SF1	96	98.737	ENSMLUG00000015217	-	74	98.737	Myotis_lucifugus
ENSOPRG00000005008	SF1	96	98.947	ENSNGAG00000005550	Sf1	74	98.947	Nannospalax_galili
ENSOPRG00000005008	SF1	66	84.802	ENSNBRG00000017606	sf1	54	79.076	Neolamprologus_brichardi
ENSOPRG00000005008	SF1	96	99.577	ENSNLEG00000005236	-	78	99.692	Nomascus_leucogenys
ENSOPRG00000005008	SF1	100	98.182	ENSMEUG00000013424	SF1	93	98.182	Notamacropus_eugenii
ENSOPRG00000005008	SF1	83	96.852	ENSODEG00000006102	-	72	88.211	Octodon_degus
ENSOPRG00000005008	SF1	82	85.961	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSOPRG00000005008	SF1	96	98.947	ENSOCUG00000026486	SF1	75	98.947	Oryctolagus_cuniculus
ENSOPRG00000005008	SF1	68	80.980	ENSORLG00000011853	sf1	52	76.676	Oryzias_latipes
ENSOPRG00000005008	SF1	68	81.268	ENSORLG00020011834	sf1	52	76.676	Oryzias_latipes_hni
ENSOPRG00000005008	SF1	66	80.473	ENSORLG00015012855	sf1	52	76.408	Oryzias_latipes_hsok
ENSOPRG00000005008	SF1	96	99.158	ENSOGAG00000016196	SF1	75	99.158	Otolemur_garnettii
ENSOPRG00000005008	SF1	96	94.389	ENSOARG00000009166	SF1	87	94.389	Ovis_aries
ENSOPRG00000005008	SF1	96	99.158	ENSPPAG00000002799	-	94	95.541	Pan_paniscus
ENSOPRG00000005008	SF1	100	99.394	ENSPPRG00000013566	SF1	77	99.158	Panthera_pardus
ENSOPRG00000005008	SF1	80	98.489	ENSPTIG00000016141	SF1	71	98.489	Panthera_tigris_altaica
ENSOPRG00000005008	SF1	100	99.394	ENSPTRG00000003846	SF1	94	95.541	Pan_troglodytes
ENSOPRG00000005008	SF1	100	99.394	ENSPANG00000020754	SF1	95	98.319	Papio_anubis
ENSOPRG00000005008	SF1	66	80.180	ENSPKIG00000012116	sf1	88	74.785	Paramormyrops_kingsleyae
ENSOPRG00000005008	SF1	71	87.464	ENSPSIG00000003610	SF1	81	81.687	Pelodiscus_sinensis
ENSOPRG00000005008	SF1	96	98.526	ENSPEMG00000010463	Sf1	74	98.526	Peromyscus_maniculatus_bairdii
ENSOPRG00000005008	SF1	96	98.105	ENSPCIG00000018173	SF1	75	98.105	Phascolarctos_cinereus
ENSOPRG00000005008	SF1	66	86.154	ENSPFOG00000013683	sf1	59	81.096	Poecilia_formosa
ENSOPRG00000005008	SF1	66	84.431	ENSPLAG00000018076	sf1	54	79.412	Poecilia_latipinna
ENSOPRG00000005008	SF1	66	84.431	ENSPMEG00000005726	sf1	55	79.679	Poecilia_mexicana
ENSOPRG00000005008	SF1	66	83.832	ENSPREG00000004155	sf1	53	78.877	Poecilia_reticulata
ENSOPRG00000005008	SF1	96	99.577	ENSPPYG00000003098	-	89	99.577	Pongo_abelii
ENSOPRG00000005008	SF1	100	98.788	ENSPCAG00000013631	SF1	74	98.788	Procavia_capensis
ENSOPRG00000005008	SF1	96	99.158	ENSPCOG00000027546	SF1	95	95.127	Propithecus_coquereli
ENSOPRG00000005008	SF1	100	99.394	ENSPVAG00000016938	SF1	74	99.394	Pteropus_vampyrus
ENSOPRG00000005008	SF1	66	86.527	ENSPNAG00000013072	sf1	53	79.730	Pygocentrus_nattereri
ENSOPRG00000005008	SF1	96	98.526	ENSRNOG00000021085	Sf1	97	96.304	Rattus_norvegicus
ENSOPRG00000005008	SF1	88	99.314	ENSRBIG00000042818	SF1	79	99.390	Rhinopithecus_bieti
ENSOPRG00000005008	SF1	100	99.394	ENSRROG00000045655	SF1	95	99.394	Rhinopithecus_roxellana
ENSOPRG00000005008	SF1	52	44.569	YLR116W	MSL5	54	44.280	Saccharomyces_cerevisiae
ENSOPRG00000005008	SF1	96	83.087	ENSSBOG00000022267	-	90	86.410	Saimiri_boliviensis_boliviensis
ENSOPRG00000005008	SF1	71	92.717	ENSSHAG00000006841	SF1	65	94.118	Sarcophilus_harrisii
ENSOPRG00000005008	SF1	74	75.853	ENSSMAG00000007549	sf1	56	76.316	Scophthalmus_maximus
ENSOPRG00000005008	SF1	96	97.679	ENSSARG00000008180	SF1	92	97.679	Sorex_araneus
ENSOPRG00000005008	SF1	99	80.512	ENSSPUG00000012907	SF1	81	80.325	Sphenodon_punctatus
ENSOPRG00000005008	SF1	66	82.036	ENSSPAG00000019060	sf1	53	76.676	Stegastes_partitus
ENSOPRG00000005008	SF1	100	99.192	ENSSSCG00000013021	SF1	90	99.192	Sus_scrofa
ENSOPRG00000005008	SF1	97	60.041	ENSTNIG00000004820	sf1	69	68.817	Tetraodon_nigroviridis
ENSOPRG00000005008	SF1	84	91.325	ENSTBEG00000013133	SF1	60	91.283	Tupaia_belangeri
ENSOPRG00000005008	SF1	100	94.141	ENSTTRG00000008857	SF1	92	94.747	Tursiops_truncatus
ENSOPRG00000005008	SF1	84	95.411	ENSUAMG00000011977	SF1	79	95.411	Ursus_americanus
ENSOPRG00000005008	SF1	84	99.517	ENSUMAG00000007268	SF1	79	99.516	Ursus_maritimus
ENSOPRG00000005008	SF1	63	100.000	ENSVPAG00000011912	SF1	58	100.000	Vicugna_pacos
ENSOPRG00000005008	SF1	100	99.394	ENSVVUG00000028585	SF1	90	99.394	Vulpes_vulpes
ENSOPRG00000005008	SF1	84	76.303	ENSXETG00000008434	sf1	60	81.471	Xenopus_tropicalis
ENSOPRG00000005008	SF1	66	85.583	ENSXCOG00000003704	sf1	67	81.096	Xiphophorus_couchianus
ENSOPRG00000005008	SF1	66	83.881	ENSXMAG00000007822	sf1	55	79.679	Xiphophorus_maculatus