EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000005065 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 6189 bases
Position: chrGeneScaffold_4870:258188-264376
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000004655	EXOSC1	PF10447.9	3.4e-15	1	1
ENSOPRP00000004655	ECR1_N	PF14382.6	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000005059	EXOSC1-201	588	-	ENSOPRP00000004655	195 (aa)	-	UPI0001778B1C

Gene Model

Click here to download ENSOPRG00000005065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000005065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000005065	EXOSC1	100	95.385	ENSG00000171311	EXOSC1	100	95.385	Homo_sapiens
ENSOPRG00000005065	EXOSC1	98	79.581	ENSAPOG00000007822	exosc1	98	79.581	Acanthochromis_polyacanthus
ENSOPRG00000005065	EXOSC1	100	96.923	ENSAMEG00000000129	EXOSC1	100	96.923	Ailuropoda_melanoleuca
ENSOPRG00000005065	EXOSC1	96	78.723	ENSACIG00000018956	exosc1	92	78.723	Amphilophus_citrinellus
ENSOPRG00000005065	EXOSC1	98	79.581	ENSAOCG00000010699	exosc1	98	79.581	Amphiprion_ocellaris
ENSOPRG00000005065	EXOSC1	92	70.391	ENSAPEG00000012690	exosc1	96	70.391	Amphiprion_percula
ENSOPRG00000005065	EXOSC1	98	80.105	ENSATEG00000018683	exosc1	98	80.105	Anabas_testudineus
ENSOPRG00000005065	EXOSC1	99	85.492	ENSACAG00000002101	EXOSC1	99	85.492	Anolis_carolinensis
ENSOPRG00000005065	EXOSC1	100	96.923	ENSANAG00000034669	EXOSC1	100	96.923	Aotus_nancymaae
ENSOPRG00000005065	EXOSC1	98	79.058	ENSACLG00000021243	exosc1	98	79.058	Astatotilapia_calliptera
ENSOPRG00000005065	EXOSC1	98	81.152	ENSAMXG00000011116	exosc1	98	81.152	Astyanax_mexicanus
ENSOPRG00000005065	EXOSC1	100	97.436	ENSBTAG00000012699	EXOSC1	100	97.436	Bos_taurus
ENSOPRG00000005065	EXOSC1	92	33.511	WBGene00012966	exos-1	90	33.511	Caenorhabditis_elegans
ENSOPRG00000005065	EXOSC1	100	97.436	ENSCJAG00000016586	EXOSC1	100	97.436	Callithrix_jacchus
ENSOPRG00000005065	EXOSC1	100	96.410	ENSCAFG00000009068	EXOSC1	94	96.410	Canis_familiaris
ENSOPRG00000005065	EXOSC1	100	96.410	ENSCAFG00020006002	EXOSC1	94	96.410	Canis_lupus_dingo
ENSOPRG00000005065	EXOSC1	100	97.436	ENSCHIG00000015253	EXOSC1	100	97.436	Capra_hircus
ENSOPRG00000005065	EXOSC1	100	96.410	ENSTSYG00000000760	EXOSC1	100	96.410	Carlito_syrichta
ENSOPRG00000005065	EXOSC1	100	96.923	ENSCPOG00000001173	EXOSC1	100	96.923	Cavia_porcellus
ENSOPRG00000005065	EXOSC1	100	54.822	ENSCCAG00000023986	EXOSC1	100	54.822	Cebus_capucinus
ENSOPRG00000005065	EXOSC1	100	95.385	ENSCATG00000034114	EXOSC1	100	95.385	Cercocebus_atys
ENSOPRG00000005065	EXOSC1	100	97.436	ENSCLAG00000002463	EXOSC1	100	97.436	Chinchilla_lanigera
ENSOPRG00000005065	EXOSC1	100	94.872	ENSCSAG00000005870	EXOSC1	100	94.872	Chlorocebus_sabaeus
ENSOPRG00000005065	EXOSC1	96	82.353	ENSCHOG00000006477	EXOSC1	100	82.353	Choloepus_hoffmanni
ENSOPRG00000005065	EXOSC1	54	83.019	ENSCPBG00000011949	EXOSC1	88	83.019	Chrysemys_picta_bellii
ENSOPRG00000005065	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSOPRG00000005065	EXOSC1	95	56.684	ENSCSAVG00000010865	-	95	56.684	Ciona_savignyi
ENSOPRG00000005065	EXOSC1	100	95.385	ENSCANG00000034159	EXOSC1	100	95.385	Colobus_angolensis_palliatus
ENSOPRG00000005065	EXOSC1	100	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSOPRG00000005065	EXOSC1	100	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSOPRG00000005065	EXOSC1	98	67.016	ENSCSEG00000007895	exosc1	95	67.016	Cynoglossus_semilaevis
ENSOPRG00000005065	EXOSC1	98	75.000	ENSCVAG00000016748	exosc1	99	75.000	Cyprinodon_variegatus
ENSOPRG00000005065	EXOSC1	98	80.105	ENSDARG00000059841	exosc1	98	80.105	Danio_rerio
ENSOPRG00000005065	EXOSC1	75	96.622	ENSDNOG00000007983	EXOSC1	100	96.622	Dasypus_novemcinctus
ENSOPRG00000005065	EXOSC1	100	96.923	ENSDORG00000016528	Exosc1	100	96.923	Dipodomys_ordii
ENSOPRG00000005065	EXOSC1	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSOPRG00000005065	EXOSC1	100	94.872	ENSETEG00000002469	-	100	94.872	Echinops_telfairi
ENSOPRG00000005065	EXOSC1	99	61.224	ENSEBUG00000008164	exosc1	98	61.224	Eptatretus_burgeri
ENSOPRG00000005065	EXOSC1	100	86.154	ENSEASG00005008684	EXOSC1	100	86.154	Equus_asinus_asinus
ENSOPRG00000005065	EXOSC1	61	75.630	ENSECAG00000010621	EXOSC1	71	75.630	Equus_caballus
ENSOPRG00000005065	EXOSC1	100	95.897	ENSEEUG00000005647	EXOSC1	100	95.897	Erinaceus_europaeus
ENSOPRG00000005065	EXOSC1	94	80.435	ENSELUG00000017369	exosc1	81	80.435	Esox_lucius
ENSOPRG00000005065	EXOSC1	100	96.923	ENSFCAG00000040563	EXOSC1	94	96.923	Felis_catus
ENSOPRG00000005065	EXOSC1	100	84.615	ENSFALG00000008450	EXOSC1	100	84.615	Ficedula_albicollis
ENSOPRG00000005065	EXOSC1	100	96.923	ENSFDAG00000000846	EXOSC1	100	96.923	Fukomys_damarensis
ENSOPRG00000005065	EXOSC1	98	75.393	ENSFHEG00000009154	exosc1	98	75.393	Fundulus_heteroclitus
ENSOPRG00000005065	EXOSC1	98	79.581	ENSGMOG00000008993	exosc1	98	79.581	Gadus_morhua
ENSOPRG00000005065	EXOSC1	100	72.821	ENSGALG00000039917	EXOSC1	100	87.671	Gallus_gallus
ENSOPRG00000005065	EXOSC1	98	75.000	ENSGAFG00000010265	exosc1	94	75.000	Gambusia_affinis
ENSOPRG00000005065	EXOSC1	98	79.581	ENSGACG00000018936	exosc1	98	79.581	Gasterosteus_aculeatus
ENSOPRG00000005065	EXOSC1	100	86.154	ENSGAGG00000019192	EXOSC1	100	86.154	Gopherus_agassizii
ENSOPRG00000005065	EXOSC1	100	83.077	ENSGGOG00000003099	EXOSC1	100	83.077	Gorilla_gorilla
ENSOPRG00000005065	EXOSC1	98	79.058	ENSHBUG00000017857	exosc1	98	79.058	Haplochromis_burtoni
ENSOPRG00000005065	EXOSC1	100	96.923	ENSHGLG00000016927	EXOSC1	100	96.923	Heterocephalus_glaber_female
ENSOPRG00000005065	EXOSC1	100	96.923	ENSHGLG00100012208	EXOSC1	100	96.923	Heterocephalus_glaber_male
ENSOPRG00000005065	EXOSC1	98	78.534	ENSHCOG00000019882	exosc1	98	78.534	Hippocampus_comes
ENSOPRG00000005065	EXOSC1	98	80.628	ENSIPUG00000007685	exosc1	98	80.628	Ictalurus_punctatus
ENSOPRG00000005065	EXOSC1	63	81.148	ENSSTOG00000029860	-	93	81.148	Ictidomys_tridecemlineatus
ENSOPRG00000005065	EXOSC1	100	96.923	ENSSTOG00000006615	EXOSC1	100	96.923	Ictidomys_tridecemlineatus
ENSOPRG00000005065	EXOSC1	100	96.923	ENSJJAG00000013311	Exosc1	100	96.923	Jaculus_jaculus
ENSOPRG00000005065	EXOSC1	98	78.125	ENSKMAG00000001202	exosc1	81	78.125	Kryptolebias_marmoratus
ENSOPRG00000005065	EXOSC1	98	79.058	ENSLBEG00000011448	exosc1	98	79.058	Labrus_bergylta
ENSOPRG00000005065	EXOSC1	98	59.596	ENSLOCG00000003776	exosc1	99	59.596	Lepisosteus_oculatus
ENSOPRG00000005065	EXOSC1	100	95.897	ENSLAFG00000015983	EXOSC1	100	95.897	Loxodonta_africana
ENSOPRG00000005065	EXOSC1	100	95.385	ENSMFAG00000001493	EXOSC1	100	95.385	Macaca_fascicularis
ENSOPRG00000005065	EXOSC1	100	95.385	ENSMMUG00000020028	EXOSC1	100	88.945	Macaca_mulatta
ENSOPRG00000005065	EXOSC1	100	95.385	ENSMNEG00000029816	EXOSC1	100	95.385	Macaca_nemestrina
ENSOPRG00000005065	EXOSC1	100	90.256	ENSMLEG00000027643	EXOSC1	100	90.256	Mandrillus_leucophaeus
ENSOPRG00000005065	EXOSC1	98	79.581	ENSMAMG00000012200	exosc1	98	79.581	Mastacembelus_armatus
ENSOPRG00000005065	EXOSC1	98	79.058	ENSMZEG00005007042	exosc1	98	79.058	Maylandia_zebra
ENSOPRG00000005065	EXOSC1	100	85.128	ENSMAUG00000020462	-	100	85.128	Mesocricetus_auratus
ENSOPRG00000005065	EXOSC1	100	96.410	ENSMICG00000007664	EXOSC1	92	96.410	Microcebus_murinus
ENSOPRG00000005065	EXOSC1	97	90.526	ENSMOCG00000017124	-	97	90.526	Microtus_ochrogaster
ENSOPRG00000005065	EXOSC1	100	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSOPRG00000005065	EXOSC1	99	60.825	ENSMMOG00000021403	exosc1	99	60.825	Mola_mola
ENSOPRG00000005065	EXOSC1	100	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSOPRG00000005065	EXOSC1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSOPRG00000005065	EXOSC1	100	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSOPRG00000005065	EXOSC1	100	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSOPRG00000005065	EXOSC1	100	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSOPRG00000005065	EXOSC1	100	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSOPRG00000005065	EXOSC1	100	96.923	ENSMPUG00000017044	EXOSC1	100	96.923	Mustela_putorius_furo
ENSOPRG00000005065	EXOSC1	100	96.410	ENSMLUG00000009228	EXOSC1	100	96.410	Myotis_lucifugus
ENSOPRG00000005065	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSOPRG00000005065	EXOSC1	98	60.417	ENSNBRG00000024007	exosc1	98	60.417	Neolamprologus_brichardi
ENSOPRG00000005065	EXOSC1	100	94.872	ENSNLEG00000013872	EXOSC1	100	94.872	Nomascus_leucogenys
ENSOPRG00000005065	EXOSC1	59	89.565	ENSMEUG00000002246	EXOSC1	100	89.565	Notamacropus_eugenii
ENSOPRG00000005065	EXOSC1	100	96.923	ENSODEG00000016709	EXOSC1	100	96.923	Octodon_degus
ENSOPRG00000005065	EXOSC1	98	79.058	ENSONIG00000017683	exosc1	98	79.058	Oreochromis_niloticus
ENSOPRG00000005065	EXOSC1	59	92.174	ENSOANG00000006563	EXOSC1	98	90.323	Ornithorhynchus_anatinus
ENSOPRG00000005065	EXOSC1	100	91.282	ENSOCUG00000026461	-	100	91.282	Oryctolagus_cuniculus
ENSOPRG00000005065	EXOSC1	100	96.429	ENSOCUG00000011898	-	100	96.429	Oryctolagus_cuniculus
ENSOPRG00000005065	EXOSC1	98	77.604	ENSORLG00000011595	exosc1	98	77.604	Oryzias_latipes
ENSOPRG00000005065	EXOSC1	98	77.604	ENSORLG00020005831	exosc1	98	77.604	Oryzias_latipes_hni
ENSOPRG00000005065	EXOSC1	98	77.604	ENSORLG00015004317	exosc1	98	77.604	Oryzias_latipes_hsok
ENSOPRG00000005065	EXOSC1	98	63.351	ENSOMEG00000013907	exosc1	98	63.351	Oryzias_melastigma
ENSOPRG00000005065	EXOSC1	100	96.923	ENSOGAG00000016259	EXOSC1	100	96.923	Otolemur_garnettii
ENSOPRG00000005065	EXOSC1	100	97.436	ENSOARG00000010136	EXOSC1	100	97.436	Ovis_aries
ENSOPRG00000005065	EXOSC1	100	89.899	ENSPPAG00000039842	EXOSC1	100	89.899	Pan_paniscus
ENSOPRG00000005065	EXOSC1	100	96.923	ENSPPRG00000023366	EXOSC1	100	96.923	Panthera_pardus
ENSOPRG00000005065	EXOSC1	100	96.923	ENSPTIG00000017701	EXOSC1	100	96.923	Panthera_tigris_altaica
ENSOPRG00000005065	EXOSC1	100	95.385	ENSPTRG00000002808	EXOSC1	100	95.385	Pan_troglodytes
ENSOPRG00000005065	EXOSC1	100	95.385	ENSPANG00000021324	EXOSC1	100	95.385	Papio_anubis
ENSOPRG00000005065	EXOSC1	98	80.628	ENSPKIG00000016037	exosc1	98	80.628	Paramormyrops_kingsleyae
ENSOPRG00000005065	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	80.328	Pelodiscus_sinensis
ENSOPRG00000005065	EXOSC1	98	67.539	ENSPMGG00000014002	exosc1	98	67.539	Periophthalmus_magnuspinnatus
ENSOPRG00000005065	EXOSC1	100	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSOPRG00000005065	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSOPRG00000005065	EXOSC1	100	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSOPRG00000005065	EXOSC1	98	74.479	ENSPFOG00000006755	exosc1	94	74.479	Poecilia_formosa
ENSOPRG00000005065	EXOSC1	98	74.869	ENSPLAG00000005880	exosc1	98	74.869	Poecilia_latipinna
ENSOPRG00000005065	EXOSC1	98	74.479	ENSPMEG00000015598	exosc1	94	74.479	Poecilia_mexicana
ENSOPRG00000005065	EXOSC1	98	65.625	ENSPREG00000000405	exosc1	93	65.625	Poecilia_reticulata
ENSOPRG00000005065	EXOSC1	100	94.872	ENSPPYG00000002531	EXOSC1	100	94.872	Pongo_abelii
ENSOPRG00000005065	EXOSC1	100	95.897	ENSPCAG00000009135	EXOSC1	100	95.897	Procavia_capensis
ENSOPRG00000005065	EXOSC1	100	90.769	ENSPCOG00000027539	EXOSC1	100	90.769	Propithecus_coquereli
ENSOPRG00000005065	EXOSC1	100	96.923	ENSPVAG00000003372	EXOSC1	100	96.923	Pteropus_vampyrus
ENSOPRG00000005065	EXOSC1	98	79.058	ENSPNYG00000021745	exosc1	98	79.058	Pundamilia_nyererei
ENSOPRG00000005065	EXOSC1	98	80.105	ENSPNAG00000001944	exosc1	98	80.105	Pygocentrus_nattereri
ENSOPRG00000005065	EXOSC1	100	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSOPRG00000005065	EXOSC1	100	95.385	ENSRBIG00000035618	EXOSC1	100	95.385	Rhinopithecus_bieti
ENSOPRG00000005065	EXOSC1	100	95.385	ENSRROG00000032589	EXOSC1	92	95.385	Rhinopithecus_roxellana
ENSOPRG00000005065	EXOSC1	100	96.923	ENSSBOG00000000359	EXOSC1	100	96.923	Saimiri_boliviensis_boliviensis
ENSOPRG00000005065	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSOPRG00000005065	EXOSC1	98	81.250	ENSSFOG00015009069	exosc1	99	81.250	Scleropages_formosus
ENSOPRG00000005065	EXOSC1	97	76.842	ENSSFOG00015016289	-	98	76.842	Scleropages_formosus
ENSOPRG00000005065	EXOSC1	98	80.105	ENSSMAG00000003721	exosc1	98	80.105	Scophthalmus_maximus
ENSOPRG00000005065	EXOSC1	98	80.105	ENSSDUG00000002993	exosc1	98	80.105	Seriola_dumerili
ENSOPRG00000005065	EXOSC1	98	80.105	ENSSLDG00000025181	exosc1	98	80.105	Seriola_lalandi_dorsalis
ENSOPRG00000005065	EXOSC1	100	83.077	ENSSARG00000000162	EXOSC1	100	83.077	Sorex_araneus
ENSOPRG00000005065	EXOSC1	99	84.021	ENSSPUG00000012263	EXOSC1	99	84.021	Sphenodon_punctatus
ENSOPRG00000005065	EXOSC1	98	71.204	ENSSPAG00000016792	exosc1	82	71.204	Stegastes_partitus
ENSOPRG00000005065	EXOSC1	100	95.897	ENSSSCG00000010518	EXOSC1	91	95.897	Sus_scrofa
ENSOPRG00000005065	EXOSC1	98	82.812	ENSTGUG00000009692	EXOSC1	99	82.812	Taeniopygia_guttata
ENSOPRG00000005065	EXOSC1	97	73.016	ENSTRUG00000007706	exosc1	98	73.016	Takifugu_rubripes
ENSOPRG00000005065	EXOSC1	97	72.917	ENSTNIG00000014079	exosc1	97	72.917	Tetraodon_nigroviridis
ENSOPRG00000005065	EXOSC1	100	87.692	ENSTBEG00000006011	EXOSC1	100	87.692	Tupaia_belangeri
ENSOPRG00000005065	EXOSC1	94	96.196	ENSTTRG00000009887	EXOSC1	100	96.196	Tursiops_truncatus
ENSOPRG00000005065	EXOSC1	100	81.026	ENSUAMG00000010266	EXOSC1	100	81.026	Ursus_americanus
ENSOPRG00000005065	EXOSC1	100	81.538	ENSUMAG00000022002	EXOSC1	100	81.538	Ursus_maritimus
ENSOPRG00000005065	EXOSC1	100	96.410	ENSVVUG00000023192	EXOSC1	63	96.410	Vulpes_vulpes
ENSOPRG00000005065	EXOSC1	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSOPRG00000005065	EXOSC1	62	83.333	ENSXCOG00000014499	exosc1	92	83.333	Xiphophorus_couchianus
ENSOPRG00000005065	EXOSC1	98	65.625	ENSXMAG00000023382	exosc1	93	65.625	Xiphophorus_maculatus