EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000005072 (Gene tree)
Gene ID: -
Gene Symbol: RNASEH1
Alias: -
Full Name: Ochotona princeps ribonuclease H1 (RNASEH1)%2C mRNA.
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 17627 bases
Position: chrGeneScaffold_4071:4736-22362
Accession: NM_001286019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000004662	RNase_H	PF00075.24	1.9e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000005066	-	861	-	ENSOPRP00000004662	287 (aa)	-	UPI0001775FC8

Gene Model

Click here to download ENSOPRG00000005072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000005072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000005072	RNASEH1	99	73.010	ENSG00000171865	RNASEH1	100	73.010	Homo_sapiens
ENSOPRG00000005072	RNASEH1	90	53.759	ENSAPOG00000000412	rnaseh1	89	53.759	Acanthochromis_polyacanthus
ENSOPRG00000005072	RNASEH1	92	74.812	ENSAMEG00000018433	RNASEH1	100	72.569	Ailuropoda_melanoleuca
ENSOPRG00000005072	RNASEH1	90	56.226	ENSACIG00000014666	rnaseh1	87	56.604	Amphilophus_citrinellus
ENSOPRG00000005072	RNASEH1	90	55.263	ENSAOCG00000015210	rnaseh1	89	55.263	Amphiprion_ocellaris
ENSOPRG00000005072	RNASEH1	90	55.639	ENSAPEG00000014104	rnaseh1	89	55.639	Amphiprion_percula
ENSOPRG00000005072	RNASEH1	99	52.397	ENSATEG00000000598	rnaseh1	94	55.639	Anabas_testudineus
ENSOPRG00000005072	RNASEH1	85	58.015	ENSAPLG00000001961	RNASEH1	100	58.015	Anas_platyrhynchos
ENSOPRG00000005072	RNASEH1	89	53.512	ENSACAG00000016857	rnaseh1	91	53.512	Anolis_carolinensis
ENSOPRG00000005072	RNASEH1	99	73.010	ENSANAG00000024055	RNASEH1	100	73.010	Aotus_nancymaae
ENSOPRG00000005072	RNASEH1	90	52.347	ENSACLG00000006741	rnaseh1	88	52.768	Astatotilapia_calliptera
ENSOPRG00000005072	RNASEH1	90	50.769	ENSAMXG00000042940	rnaseh1	97	47.940	Astyanax_mexicanus
ENSOPRG00000005072	RNASEH1	99	72.822	ENSBTAG00000016235	RNASEH1	100	72.822	Bos_taurus
ENSOPRG00000005072	RNASEH1	89	39.608	WBGene00004382	rnh-1.0	95	39.608	Caenorhabditis_elegans
ENSOPRG00000005072	RNASEH1	99	71.331	ENSCJAG00000035450	RNASEH1	100	71.331	Callithrix_jacchus
ENSOPRG00000005072	RNASEH1	99	72.222	ENSCAFG00000003259	RNASEH1	100	72.222	Canis_familiaris
ENSOPRG00000005072	RNASEH1	54	84.416	ENSCAFG00020004994	RNASEH1	99	84.416	Canis_lupus_dingo
ENSOPRG00000005072	RNASEH1	83	63.333	ENSCHIG00000022230	-	100	63.333	Capra_hircus
ENSOPRG00000005072	RNASEH1	99	72.759	ENSCHIG00000022264	-	100	72.759	Capra_hircus
ENSOPRG00000005072	RNASEH1	100	75.000	ENSTSYG00000012926	RNASEH1	99	75.000	Carlito_syrichta
ENSOPRG00000005072	RNASEH1	85	77.869	ENSCAPG00000004813	RNASEH1	99	77.869	Cavia_aperea
ENSOPRG00000005072	RNASEH1	100	74.653	ENSCPOG00000022278	Rnaseh1	97	74.653	Cavia_porcellus
ENSOPRG00000005072	RNASEH1	99	72.014	ENSCCAG00000038017	RNASEH1	100	72.014	Cebus_capucinus
ENSOPRG00000005072	RNASEH1	99	70.732	ENSCATG00000016515	-	100	70.732	Cercocebus_atys
ENSOPRG00000005072	RNASEH1	99	64.336	ENSCATG00000016818	-	100	64.336	Cercocebus_atys
ENSOPRG00000005072	RNASEH1	99	75.261	ENSCLAG00000002440	RNASEH1	100	75.261	Chinchilla_lanigera
ENSOPRG00000005072	RNASEH1	99	70.934	ENSCSAG00000006943	RNASEH1	100	70.934	Chlorocebus_sabaeus
ENSOPRG00000005072	RNASEH1	71	73.659	ENSCHOG00000008547	RNASEH1	100	73.659	Choloepus_hoffmanni
ENSOPRG00000005072	RNASEH1	90	62.909	ENSCPBG00000021620	RNASEH1	98	63.235	Chrysemys_picta_bellii
ENSOPRG00000005072	RNASEH1	92	38.652	ENSCING00000014054	-	96	38.652	Ciona_intestinalis
ENSOPRG00000005072	RNASEH1	75	36.481	ENSCSAVG00000000009	-	95	36.481	Ciona_savignyi
ENSOPRG00000005072	RNASEH1	99	71.429	ENSCANG00000037763	RNASEH1	100	71.429	Colobus_angolensis_palliatus
ENSOPRG00000005072	RNASEH1	99	73.171	ENSCGRG00001008950	Rnaseh1	100	73.868	Cricetulus_griseus_chok1gshd
ENSOPRG00000005072	RNASEH1	99	73.171	ENSCGRG00000006029	Rnaseh1	100	73.868	Cricetulus_griseus_crigri
ENSOPRG00000005072	RNASEH1	89	53.725	ENSCSEG00000005741	rnaseh1	93	50.746	Cynoglossus_semilaevis
ENSOPRG00000005072	RNASEH1	90	55.263	ENSCVAG00000018717	rnaseh1	88	55.263	Cyprinodon_variegatus
ENSOPRG00000005072	RNASEH1	90	52.399	ENSDARG00000042571	rnaseh1	97	52.399	Danio_rerio
ENSOPRG00000005072	RNASEH1	99	71.034	ENSDNOG00000016056	RNASEH1	100	71.034	Dasypus_novemcinctus
ENSOPRG00000005072	RNASEH1	99	72.474	ENSDORG00000000704	Rnaseh1	100	72.474	Dipodomys_ordii
ENSOPRG00000005072	RNASEH1	89	40.000	FBgn0023171	rnh1	92	40.000	Drosophila_melanogaster
ENSOPRG00000005072	RNASEH1	99	66.667	ENSETEG00000012674	RNASEH1	100	66.667	Echinops_telfairi
ENSOPRG00000005072	RNASEH1	91	47.940	ENSEBUG00000006116	rnaseh1	79	47.940	Eptatretus_burgeri
ENSOPRG00000005072	RNASEH1	89	44.637	ENSEBUG00000008898	rnaseh1	98	44.637	Eptatretus_burgeri
ENSOPRG00000005072	RNASEH1	99	72.917	ENSEASG00005022200	RNASEH1	98	72.917	Equus_asinus_asinus
ENSOPRG00000005072	RNASEH1	99	72.917	ENSECAG00000020695	RNASEH1	98	72.917	Equus_caballus
ENSOPRG00000005072	RNASEH1	98	48.805	ENSELUG00000010112	rnaseh1	97	48.805	Esox_lucius
ENSOPRG00000005072	RNASEH1	99	74.306	ENSFCAG00000025832	RNASEH1	100	74.306	Felis_catus
ENSOPRG00000005072	RNASEH1	95	55.479	ENSFALG00000002069	RNASEH1	98	55.593	Ficedula_albicollis
ENSOPRG00000005072	RNASEH1	99	71.831	ENSFDAG00000002035	RNASEH1	88	71.831	Fukomys_damarensis
ENSOPRG00000005072	RNASEH1	89	53.462	ENSGMOG00000013818	rnaseh1	88	53.462	Gadus_morhua
ENSOPRG00000005072	RNASEH1	94	57.586	ENSGALG00000016389	RNASEH1	97	57.586	Gallus_gallus
ENSOPRG00000005072	RNASEH1	90	59.176	ENSGAFG00000001776	rnaseh1	91	59.176	Gambusia_affinis
ENSOPRG00000005072	RNASEH1	90	55.056	ENSGACG00000011935	rnaseh1	90	55.056	Gasterosteus_aculeatus
ENSOPRG00000005072	RNASEH1	93	58.276	ENSGAGG00000009150	RNASEH1	65	58.966	Gopherus_agassizii
ENSOPRG00000005072	RNASEH1	99	72.318	ENSGGOG00000034822	RNASEH1	100	72.318	Gorilla_gorilla
ENSOPRG00000005072	RNASEH1	90	52.708	ENSHBUG00000004666	rnaseh1	88	54.044	Haplochromis_burtoni
ENSOPRG00000005072	RNASEH1	98	72.954	ENSHGLG00000002585	Rnaseh1	90	72.954	Heterocephalus_glaber_female
ENSOPRG00000005072	RNASEH1	98	72.954	ENSHGLG00100005105	Rnaseh1	90	72.954	Heterocephalus_glaber_male
ENSOPRG00000005072	RNASEH1	89	52.985	ENSHCOG00000012329	rnaseh1	88	54.307	Hippocampus_comes
ENSOPRG00000005072	RNASEH1	90	56.489	ENSIPUG00000023060	rnaseh1	97	56.489	Ictalurus_punctatus
ENSOPRG00000005072	RNASEH1	98	73.310	ENSSTOG00000012774	RNASEH1	99	73.310	Ictidomys_tridecemlineatus
ENSOPRG00000005072	RNASEH1	90	73.180	ENSJJAG00000020238	Rnaseh1	100	73.180	Jaculus_jaculus
ENSOPRG00000005072	RNASEH1	99	68.166	ENSJJAG00000021481	-	100	68.166	Jaculus_jaculus
ENSOPRG00000005072	RNASEH1	99	60.627	ENSJJAG00000008994	-	100	60.627	Jaculus_jaculus
ENSOPRG00000005072	RNASEH1	90	55.344	ENSKMAG00000001373	rnaseh1	89	55.344	Kryptolebias_marmoratus
ENSOPRG00000005072	RNASEH1	98	50.175	ENSLBEG00000004480	rnaseh1	97	50.175	Labrus_bergylta
ENSOPRG00000005072	RNASEH1	97	50.987	ENSLACG00000007100	RNASEH1	95	51.689	Latimeria_chalumnae
ENSOPRG00000005072	RNASEH1	90	52.593	ENSLOCG00000017212	rnaseh1	97	52.593	Lepisosteus_oculatus
ENSOPRG00000005072	RNASEH1	99	72.474	ENSLAFG00000015091	RNASEH1	99	72.474	Loxodonta_africana
ENSOPRG00000005072	RNASEH1	99	64.336	ENSMFAG00000002323	-	100	64.336	Macaca_fascicularis
ENSOPRG00000005072	RNASEH1	99	71.429	ENSMFAG00000000063	-	100	71.429	Macaca_fascicularis
ENSOPRG00000005072	RNASEH1	99	63.636	ENSMMUG00000019280	-	100	63.636	Macaca_mulatta
ENSOPRG00000005072	RNASEH1	99	71.777	ENSMNEG00000040183	-	100	71.777	Macaca_nemestrina
ENSOPRG00000005072	RNASEH1	99	64.336	ENSMNEG00000029676	-	100	64.336	Macaca_nemestrina
ENSOPRG00000005072	RNASEH1	99	67.483	ENSMLEG00000028662	-	100	67.483	Mandrillus_leucophaeus
ENSOPRG00000005072	RNASEH1	84	73.251	ENSMLEG00000039352	-	99	73.251	Mandrillus_leucophaeus
ENSOPRG00000005072	RNASEH1	90	55.805	ENSMAMG00000019725	rnaseh1	94	55.805	Mastacembelus_armatus
ENSOPRG00000005072	RNASEH1	90	52.347	ENSMZEG00005013006	rnaseh1	88	52.768	Maylandia_zebra
ENSOPRG00000005072	RNASEH1	80	58.730	ENSMGAG00000013979	RNASEH1	99	58.730	Meleagris_gallopavo
ENSOPRG00000005072	RNASEH1	99	73.776	ENSMAUG00000014957	Rnaseh1	99	73.776	Mesocricetus_auratus
ENSOPRG00000005072	RNASEH1	100	75.694	ENSMICG00000033156	RNASEH1	99	75.694	Microcebus_murinus
ENSOPRG00000005072	RNASEH1	99	71.724	ENSMOCG00000015522	Rnaseh1	100	71.724	Microtus_ochrogaster
ENSOPRG00000005072	RNASEH1	99	50.000	ENSMMOG00000015902	rnaseh1	96	50.000	Mola_mola
ENSOPRG00000005072	RNASEH1	94	68.382	ENSMODG00000014491	-	93	68.382	Monodelphis_domestica
ENSOPRG00000005072	RNASEH1	79	59.402	ENSMODG00000028814	-	96	57.741	Monodelphis_domestica
ENSOPRG00000005072	RNASEH1	90	53.383	ENSMALG00000010565	rnaseh1	89	53.383	Monopterus_albus
ENSOPRG00000005072	RNASEH1	99	73.519	MGP_CAROLIEiJ_G0017660	Rnaseh1	100	73.519	Mus_caroli
ENSOPRG00000005072	RNASEH1	99	72.822	ENSMUSG00000020630	Rnaseh1	100	72.822	Mus_musculus
ENSOPRG00000005072	RNASEH1	99	72.028	MGP_PahariEiJ_G0029418	Rnaseh1	99	73.077	Mus_pahari
ENSOPRG00000005072	RNASEH1	99	73.171	MGP_SPRETEiJ_G0018502	Rnaseh1	100	73.171	Mus_spretus
ENSOPRG00000005072	RNASEH1	72	74.396	ENSMPUG00000012984	RNASEH1	99	74.396	Mustela_putorius_furo
ENSOPRG00000005072	RNASEH1	98	74.823	ENSNGAG00000015966	Rnaseh1	92	74.823	Nannospalax_galili
ENSOPRG00000005072	RNASEH1	90	52.708	ENSNBRG00000008739	rnaseh1	88	53.137	Neolamprologus_brichardi
ENSOPRG00000005072	RNASEH1	84	65.021	ENSNLEG00000000059	-	91	65.021	Nomascus_leucogenys
ENSOPRG00000005072	RNASEH1	99	61.724	ENSNLEG00000015400	RNASEH1	100	61.724	Nomascus_leucogenys
ENSOPRG00000005072	RNASEH1	95	47.163	ENSMEUG00000003610	-	99	47.163	Notamacropus_eugenii
ENSOPRG00000005072	RNASEH1	99	71.429	ENSODEG00000000235	Rnaseh1	97	71.429	Octodon_degus
ENSOPRG00000005072	RNASEH1	90	53.846	ENSONIG00000018697	rnaseh1	97	53.846	Oreochromis_niloticus
ENSOPRG00000005072	RNASEH1	99	81.185	ENSOCUG00000006117	RNASEH1	100	81.185	Oryctolagus_cuniculus
ENSOPRG00000005072	RNASEH1	90	55.303	ENSORLG00000018127	rnaseh1	95	55.431	Oryzias_latipes
ENSOPRG00000005072	RNASEH1	96	53.147	ENSORLG00020013660	rnaseh1	95	53.287	Oryzias_latipes_hni
ENSOPRG00000005072	RNASEH1	96	53.846	ENSORLG00015011338	rnaseh1	95	53.952	Oryzias_latipes_hsok
ENSOPRG00000005072	RNASEH1	81	52.966	ENSOMEG00000004710	rnaseh1	90	52.966	Oryzias_melastigma
ENSOPRG00000005072	RNASEH1	99	74.306	ENSOGAG00000017176	RNASEH1	100	74.306	Otolemur_garnettii
ENSOPRG00000005072	RNASEH1	99	63.140	ENSOARG00000005386	RNASEH1	100	63.140	Ovis_aries
ENSOPRG00000005072	RNASEH1	99	73.010	ENSPPAG00000034221	RNASEH1	100	73.010	Pan_paniscus
ENSOPRG00000005072	RNASEH1	99	74.306	ENSPPRG00000015513	RNASEH1	100	74.306	Panthera_pardus
ENSOPRG00000005072	RNASEH1	84	76.132	ENSPTIG00000019034	RNASEH1	85	76.132	Panthera_tigris_altaica
ENSOPRG00000005072	RNASEH1	99	73.010	ENSPTRG00000011614	RNASEH1	100	73.010	Pan_troglodytes
ENSOPRG00000005072	RNASEH1	84	66.397	ENSPTRG00000043403	-	94	66.397	Pan_troglodytes
ENSOPRG00000005072	RNASEH1	99	62.238	ENSPANG00000018246	-	100	62.238	Papio_anubis
ENSOPRG00000005072	RNASEH1	99	70.732	ENSPANG00000000443	RNASEH1	99	72.245	Papio_anubis
ENSOPRG00000005072	RNASEH1	89	51.341	ENSPKIG00000003146	rnaseh1	97	51.341	Paramormyrops_kingsleyae
ENSOPRG00000005072	RNASEH1	89	59.341	ENSPSIG00000002937	RNASEH1	98	59.341	Pelodiscus_sinensis
ENSOPRG00000005072	RNASEH1	89	55.294	ENSPMGG00000017463	rnaseh1	90	55.294	Periophthalmus_magnuspinnatus
ENSOPRG00000005072	RNASEH1	99	77.003	ENSPEMG00000022465	-	100	77.003	Peromyscus_maniculatus_bairdii
ENSOPRG00000005072	RNASEH1	93	65.556	ENSPCIG00000023334	-	93	65.556	Phascolarctos_cinereus
ENSOPRG00000005072	RNASEH1	90	59.259	ENSPFOG00000002841	rnaseh1	91	59.259	Poecilia_formosa
ENSOPRG00000005072	RNASEH1	64	51.852	ENSPLAG00000021349	-	74	51.852	Poecilia_latipinna
ENSOPRG00000005072	RNASEH1	90	60.223	ENSPMEG00000016826	rnaseh1	91	60.223	Poecilia_mexicana
ENSOPRG00000005072	RNASEH1	95	54.545	ENSPREG00000012197	rnaseh1	97	54.545	Poecilia_reticulata
ENSOPRG00000005072	RNASEH1	99	62.630	ENSPPYG00000025873	RNASEH1	100	62.630	Pongo_abelii
ENSOPRG00000005072	RNASEH1	91	67.547	ENSPPYG00000008067	-	100	67.547	Pongo_abelii
ENSOPRG00000005072	RNASEH1	99	69.930	ENSPCAG00000002500	RNASEH1	99	69.930	Procavia_capensis
ENSOPRG00000005072	RNASEH1	100	69.444	ENSPCOG00000019444	RNASEH1	100	69.444	Propithecus_coquereli
ENSOPRG00000005072	RNASEH1	99	73.776	ENSPVAG00000002070	RNASEH1	99	73.776	Pteropus_vampyrus
ENSOPRG00000005072	RNASEH1	90	51.986	ENSPNYG00000001292	rnaseh1	88	52.399	Pundamilia_nyererei
ENSOPRG00000005072	RNASEH1	90	56.538	ENSPNAG00000022344	rnaseh1	90	56.538	Pygocentrus_nattereri
ENSOPRG00000005072	RNASEH1	99	73.776	ENSRNOG00000008584	Rnaseh1	99	73.776	Rattus_norvegicus
ENSOPRG00000005072	RNASEH1	99	71.080	ENSRBIG00000034222	RNASEH1	99	71.080	Rhinopithecus_bieti
ENSOPRG00000005072	RNASEH1	99	71.080	ENSRROG00000041761	RNASEH1	99	71.080	Rhinopithecus_roxellana
ENSOPRG00000005072	RNASEH1	99	71.672	ENSSBOG00000025411	RNASEH1	100	71.672	Saimiri_boliviensis_boliviensis
ENSOPRG00000005072	RNASEH1	93	66.171	ENSSHAG00000013051	RNASEH1	91	66.171	Sarcophilus_harrisii
ENSOPRG00000005072	RNASEH1	90	50.542	ENSSFOG00015002709	rnaseh1	91	50.000	Scleropages_formosus
ENSOPRG00000005072	RNASEH1	90	55.056	ENSSMAG00000007586	rnaseh1	88	55.805	Scophthalmus_maximus
ENSOPRG00000005072	RNASEH1	90	53.759	ENSSDUG00000008217	rnaseh1	94	53.759	Seriola_dumerili
ENSOPRG00000005072	RNASEH1	92	49.653	ENSSLDG00000000442	rnaseh1	94	53.200	Seriola_lalandi_dorsalis
ENSOPRG00000005072	RNASEH1	91	59.420	ENSSPUG00000006644	RNASEH1	93	59.420	Sphenodon_punctatus
ENSOPRG00000005072	RNASEH1	90	56.015	ENSSPAG00000009353	rnaseh1	88	56.015	Stegastes_partitus
ENSOPRG00000005072	RNASEH1	93	73.408	ENSSSCG00000025305	RNASEH1	99	70.979	Sus_scrofa
ENSOPRG00000005072	RNASEH1	90	55.319	ENSTGUG00000012980	RNASEH1	92	55.914	Taeniopygia_guttata
ENSOPRG00000005072	RNASEH1	90	54.851	ENSTRUG00000015774	rnaseh1	96	54.851	Takifugu_rubripes
ENSOPRG00000005072	RNASEH1	90	56.827	ENSTNIG00000010715	rnaseh1	96	56.827	Tetraodon_nigroviridis
ENSOPRG00000005072	RNASEH1	99	71.181	ENSTTRG00000001615	RNASEH1	100	71.181	Tursiops_truncatus
ENSOPRG00000005072	RNASEH1	55	82.390	ENSUAMG00000018254	RNASEH1	82	82.390	Ursus_americanus
ENSOPRG00000005072	RNASEH1	68	72.589	ENSUMAG00000003941	RNASEH1	65	72.589	Ursus_maritimus
ENSOPRG00000005072	RNASEH1	99	62.976	ENSVPAG00000011589	RNASEH1	100	62.976	Vicugna_pacos
ENSOPRG00000005072	RNASEH1	99	72.569	ENSVVUG00000008633	RNASEH1	90	72.569	Vulpes_vulpes
ENSOPRG00000005072	RNASEH1	92	51.254	ENSXETG00000001212	rnaseh1	94	52.364	Xenopus_tropicalis
ENSOPRG00000005072	RNASEH1	90	43.191	ENSXETG00000030371	-	100	43.191	Xenopus_tropicalis
ENSOPRG00000005072	RNASEH1	89	57.034	ENSXMAG00000002357	rnaseh1	89	57.034	Xiphophorus_maculatus