EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOPRG00000005199 (Gene tree)
Gene ID
-
Gene Symbol
CPSF6
Alias
CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Ochotona_princeps
Status
putative
Strand
Plus strand
Length
15032 bases
Position
chrscaffold_13266:2134-17165
Accession
13871
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOPRP00000004775RRM_1PF00076.225.1e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOPRT00000005196CPSF6-2011707-ENSOPRP00000004775568 (aa)-UPI0001775ABA
Gene Model
Click here to download ENSOPRG00000005199's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000005199's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOPRG00000005199CPSF610099.472ENSG00000111605CPSF69799.472Homo_sapiens
ENSOPRG00000005199CPSF66254.872ENSG00000149532CPSF79054.598Homo_sapiens
ENSOPRG00000005199CPSF610099.296ENSAMEG00000011781CPSF69799.296Ailuropoda_melanoleuca
ENSOPRG00000005199CPSF65950.249ENSANAG00000024635CPSF76750.276Aotus_nancymaae
ENSOPRG00000005199CPSF610099.472ENSANAG00000019240CPSF69999.472Aotus_nancymaae
ENSOPRG00000005199CPSF65790.419ENSAMXG00000016745CPSF67089.091Astyanax_mexicanus
ENSOPRG00000005199CPSF65955.385ENSBTAG00000015263CPSF76755.429Bos_taurus
ENSOPRG00000005199CPSF610099.648ENSBTAG00000007323CPSF69799.648Bos_taurus
ENSOPRG00000005199CPSF610099.297ENSCJAG00000001798CPSF69799.297Callithrix_jacchus
ENSOPRG00000005199CPSF66254.872ENSCJAG00000019282CPSF77954.857Callithrix_jacchus
ENSOPRG00000005199CPSF610099.472ENSCAFG00000000424CPSF69999.472Canis_familiaris
ENSOPRG00000005199CPSF65955.385ENSCAFG00000016152CPSF76756.000Canis_familiaris
ENSOPRG00000005199CPSF65955.385ENSCAFG00020012753CPSF76756.000Canis_lupus_dingo
ENSOPRG00000005199CPSF610099.472ENSCAFG00020016950CPSF69799.472Canis_lupus_dingo
ENSOPRG00000005199CPSF610099.648ENSCHIG00000010792CPSF69799.648Capra_hircus
ENSOPRG00000005199CPSF65955.385ENSCHIG00000014655CPSF76755.429Capra_hircus
ENSOPRG00000005199CPSF610099.472ENSTSYG00000008591CPSF699100.000Carlito_syrichta
ENSOPRG00000005199CPSF65955.385ENSTSYG00000010138-6756.000Carlito_syrichta
ENSOPRG00000005199CPSF65955.385ENSCAPG00000006384CPSF77056.000Cavia_aperea
ENSOPRG00000005199CPSF610099.472ENSCPOG00000015201CPSF69799.472Cavia_porcellus
ENSOPRG00000005199CPSF65955.385ENSCPOG00000009980CPSF76756.000Cavia_porcellus
ENSOPRG00000005199CPSF65954.872ENSCCAG00000032367CPSF76755.429Cebus_capucinus
ENSOPRG00000005199CPSF610099.297ENSCCAG00000028149CPSF69799.297Cebus_capucinus
ENSOPRG00000005199CPSF66254.872ENSCATG00000042801CPSF77355.429Cercocebus_atys
ENSOPRG00000005199CPSF610099.472ENSCATG00000039288CPSF69799.472Cercocebus_atys
ENSOPRG00000005199CPSF65955.385ENSCLAG00000003174CPSF76755.429Chinchilla_lanigera
ENSOPRG00000005199CPSF610099.472ENSCLAG00000010149CPSF610099.472Chinchilla_lanigera
ENSOPRG00000005199CPSF66254.872ENSCSAG00000006414CPSF77355.429Chlorocebus_sabaeus
ENSOPRG00000005199CPSF610099.472ENSCSAG00000004232CPSF69799.472Chlorocebus_sabaeus
ENSOPRG00000005199CPSF610091.373ENSCPBG00000013322CPSF69691.373Chrysemys_picta_bellii
ENSOPRG00000005199CPSF610099.472ENSCANG00000037294CPSF610099.472Colobus_angolensis_palliatus
ENSOPRG00000005199CPSF65955.897ENSCGRG00001020382Cpsf76757.714Cricetulus_griseus_chok1gshd
ENSOPRG00000005199CPSF610099.472ENSCGRG00001018082Cpsf69799.472Cricetulus_griseus_chok1gshd
ENSOPRG00000005199CPSF66554.378ENSCGRG00000017954Cpsf77357.714Cricetulus_griseus_crigri
ENSOPRG00000005199CPSF610099.472ENSCGRG00000016909Cpsf610099.472Cricetulus_griseus_crigri
ENSOPRG00000005199CPSF65043.299ENSCSEG00000001956CPSF75746.154Cynoglossus_semilaevis
ENSOPRG00000005199CPSF66436.986ENSCVAG00000007392CPSF75144.521Cyprinodon_variegatus
ENSOPRG00000005199CPSF65955.385ENSDNOG00000018517CPSF77955.429Dasypus_novemcinctus
ENSOPRG00000005199CPSF610092.619ENSDNOG00000015292CPSF69692.619Dasypus_novemcinctus
ENSOPRG00000005199CPSF610099.472ENSDORG00000002950Cpsf610099.472Dipodomys_ordii
ENSOPRG00000005199CPSF610092.077ENSETEG00000002097CPSF69792.077Echinops_telfairi
ENSOPRG00000005199CPSF65954.688ENSETEG00000003765CPSF76756.725Echinops_telfairi
ENSOPRG00000005199CPSF65955.385ENSEASG00005008196CPSF76756.000Equus_asinus_asinus
ENSOPRG00000005199CPSF610099.472ENSEASG00005008066CPSF69799.472Equus_asinus_asinus
ENSOPRG00000005199CPSF610099.472ENSECAG00000015988CPSF69799.472Equus_caballus
ENSOPRG00000005199CPSF65953.297ENSECAG00000018521CPSF78655.429Equus_caballus
ENSOPRG00000005199CPSF610098.768ENSEEUG00000015039CPSF610098.768Erinaceus_europaeus
ENSOPRG00000005199CPSF610099.296ENSFCAG00000002855CPSF69799.296Felis_catus
ENSOPRG00000005199CPSF65955.385ENSFCAG00000013677CPSF78655.429Felis_catus
ENSOPRG00000005199CPSF65853.763ENSFALG00000011927CPSF77156.395Ficedula_albicollis
ENSOPRG00000005199CPSF610091.564ENSFALG00000010157CPSF69991.564Ficedula_albicollis
ENSOPRG00000005199CPSF65955.897ENSFDAG00000003919CPSF76756.000Fukomys_damarensis
ENSOPRG00000005199CPSF610099.296ENSFDAG00000002281CPSF69799.296Fukomys_damarensis
ENSOPRG00000005199CPSF65754.749ENSGALG00000040962CPSF75956.647Gallus_gallus
ENSOPRG00000005199CPSF610091.373ENSGAGG00000010228CPSF69691.373Gopherus_agassizii
ENSOPRG00000005199CPSF610099.297ENSGGOG00000008211CPSF69799.297Gorilla_gorilla
ENSOPRG00000005199CPSF66255.897ENSHGLG00000019090-7356.000Heterocephalus_glaber_female
ENSOPRG00000005199CPSF610099.296ENSHGLG00000000792CPSF69799.296Heterocephalus_glaber_female
ENSOPRG00000005199CPSF610099.296ENSHGLG00100013861CPSF610099.296Heterocephalus_glaber_male
ENSOPRG00000005199CPSF610099.472ENSSTOG00000014133CPSF610093.134Ictidomys_tridecemlineatus
ENSOPRG00000005199CPSF65955.385ENSSTOG00000007708CPSF76756.000Ictidomys_tridecemlineatus
ENSOPRG00000005199CPSF610099.472ENSJJAG00000014647Cpsf610099.472Jaculus_jaculus
ENSOPRG00000005199CPSF66255.385ENSJJAG00000019390Cpsf77356.000Jaculus_jaculus
ENSOPRG00000005199CPSF65740.331ENSLBEG00000000947CPSF76737.838Labrus_bergylta
ENSOPRG00000005199CPSF66144.231ENSLACG00000005542CPSF76944.231Latimeria_chalumnae
ENSOPRG00000005199CPSF66192.353ENSLOCG00000016190cpsf66392.353Lepisosteus_oculatus
ENSOPRG00000005199CPSF610093.134ENSLAFG00000030413CPSF69693.134Loxodonta_africana
ENSOPRG00000005199CPSF610099.297ENSMFAG00000045318CPSF69799.297Macaca_fascicularis
ENSOPRG00000005199CPSF65954.872ENSMFAG00000001401CPSF76855.429Macaca_fascicularis
ENSOPRG00000005199CPSF66254.872ENSMMUG00000015280CPSF77355.429Macaca_mulatta
ENSOPRG00000005199CPSF610099.297ENSMMUG00000002921CPSF69799.297Macaca_mulatta
ENSOPRG00000005199CPSF610099.297ENSMNEG00000036311CPSF69799.297Macaca_nemestrina
ENSOPRG00000005199CPSF66254.872ENSMNEG00000029585CPSF77355.429Macaca_nemestrina
ENSOPRG00000005199CPSF610099.472ENSMLEG00000003957CPSF610099.472Mandrillus_leucophaeus
ENSOPRG00000005199CPSF65954.872ENSMLEG00000031269CPSF76855.429Mandrillus_leucophaeus
ENSOPRG00000005199CPSF610088.752ENSMGAG00000010552CPSF69788.752Meleagris_gallopavo
ENSOPRG00000005199CPSF68050.719ENSMGAG00000004876CPSF75961.446Meleagris_gallopavo
ENSOPRG00000005199CPSF610099.472ENSMAUG00000013240Cpsf69799.472Mesocricetus_auratus
ENSOPRG00000005199CPSF65955.385ENSMAUG00000013020Cpsf76756.000Mesocricetus_auratus
ENSOPRG00000005199CPSF610099.472ENSMICG00000007385-9799.472Microcebus_murinus
ENSOPRG00000005199CPSF65955.385ENSMICG00000013788CPSF76756.000Microcebus_murinus
ENSOPRG00000005199CPSF65955.385ENSMOCG00000000072Cpsf76756.000Microtus_ochrogaster
ENSOPRG00000005199CPSF610099.472ENSMOCG00000013982Cpsf69799.472Microtus_ochrogaster
ENSOPRG00000005199CPSF65952.551ENSMODG00000020364CPSF76856.250Monodelphis_domestica
ENSOPRG00000005199CPSF610092.606ENSMODG00000007123CPSF69692.606Monodelphis_domestica
ENSOPRG00000005199CPSF66890.155ENSMALG00000014908cpsf67491.525Monopterus_albus
ENSOPRG00000005199CPSF610099.472MGP_CAROLIEiJ_G0015834Cpsf69799.472Mus_caroli
ENSOPRG00000005199CPSF65955.385MGP_CAROLIEiJ_G0022690Cpsf76756.000Mus_caroli
ENSOPRG00000005199CPSF65955.385ENSMUSG00000034820Cpsf76756.000Mus_musculus
ENSOPRG00000005199CPSF610099.120ENSMUSG00000055531Cpsf69799.120Mus_musculus
ENSOPRG00000005199CPSF65955.385MGP_PahariEiJ_G0014184Cpsf76756.000Mus_pahari
ENSOPRG00000005199CPSF68298.671MGP_PahariEiJ_G0031253Cpsf69190.503Mus_pahari
ENSOPRG00000005199CPSF65955.385MGP_SPRETEiJ_G0023604Cpsf76756.000Mus_spretus
ENSOPRG00000005199CPSF610099.120MGP_SPRETEiJ_G0016657Cpsf69799.120Mus_spretus
ENSOPRG00000005199CPSF65954.359ENSMPUG00000014163CPSF76654.857Mustela_putorius_furo
ENSOPRG00000005199CPSF610091.037ENSMPUG00000017502CPSF69791.037Mustela_putorius_furo
ENSOPRG00000005199CPSF67694.928ENSMLUG00000028728-8882.424Myotis_lucifugus
ENSOPRG00000005199CPSF610091.037ENSMLUG00000004172-9791.037Myotis_lucifugus
ENSOPRG00000005199CPSF66785.246ENSMLUG00000023960-7683.784Myotis_lucifugus
ENSOPRG00000005199CPSF66255.385ENSMLUG00000013278CPSF77356.000Myotis_lucifugus
ENSOPRG00000005199CPSF610099.472ENSNGAG00000015901Cpsf69799.472Nannospalax_galili
ENSOPRG00000005199CPSF65955.385ENSNGAG00000005031Cpsf76756.000Nannospalax_galili
ENSOPRG00000005199CPSF65954.872ENSNLEG00000002529CPSF76155.429Nomascus_leucogenys
ENSOPRG00000005199CPSF610099.121ENSNLEG00000003798CPSF69799.121Nomascus_leucogenys
ENSOPRG00000005199CPSF65953.571ENSMEUG00000002261CPSF76755.814Notamacropus_eugenii
ENSOPRG00000005199CPSF610096.127ENSMEUG00000015041CPSF69696.127Notamacropus_eugenii
ENSOPRG00000005199CPSF610091.037ENSODEG00000018399-9691.037Octodon_degus
ENSOPRG00000005199CPSF67798.790ENSODEG00000004418-9098.394Octodon_degus
ENSOPRG00000005199CPSF65953.030ENSODEG00000002610CPSF76755.618Octodon_degus
ENSOPRG00000005199CPSF67381.679ENSODEG00000007109-6679.856Octodon_degus
ENSOPRG00000005199CPSF67484.231ENSONIG00000011702cpsf68583.784Oreochromis_niloticus
ENSOPRG00000005199CPSF610099.472ENSOCUG00000013505CPSF69799.472Oryctolagus_cuniculus
ENSOPRG00000005199CPSF69938.632ENSOCUG00000024726CPSF76755.429Oryctolagus_cuniculus
ENSOPRG00000005199CPSF67035.931ENSORLG00000006495CPSF75943.939Oryzias_latipes
ENSOPRG00000005199CPSF66936.087ENSORLG00020012657CPSF76141.667Oryzias_latipes_hni
ENSOPRG00000005199CPSF66837.799ENSOMEG00000000539CPSF76037.267Oryzias_melastigma
ENSOPRG00000005199CPSF65955.385ENSOGAG00000027958CPSF76256.000Otolemur_garnettii
ENSOPRG00000005199CPSF610090.685ENSOGAG00000031988CPSF69990.685Otolemur_garnettii
ENSOPRG00000005199CPSF610099.473ENSOARG00000020532CPSF610099.627Ovis_aries
ENSOPRG00000005199CPSF65955.385ENSOARG00000012937CPSF76155.429Ovis_aries
ENSOPRG00000005199CPSF610096.661ENSPPAG00000005301CPSF69896.661Pan_paniscus
ENSOPRG00000005199CPSF65954.872ENSPPAG00000028232CPSF76955.429Pan_paniscus
ENSOPRG00000005199CPSF610099.296ENSPPRG00000021620CPSF69799.296Panthera_pardus
ENSOPRG00000005199CPSF65955.385ENSPPRG00000008538CPSF76756.000Panthera_pardus
ENSOPRG00000005199CPSF69499.254ENSPTIG00000004079CPSF610099.254Panthera_tigris_altaica
ENSOPRG00000005199CPSF65955.385ENSPTIG00000021699CPSF76756.000Panthera_tigris_altaica
ENSOPRG00000005199CPSF65954.872ENSPTRG00000003742CPSF76955.429Pan_troglodytes
ENSOPRG00000005199CPSF610099.297ENSPTRG00000005205CPSF69799.297Pan_troglodytes
ENSOPRG00000005199CPSF65954.872ENSPANG00000006037CPSF76855.429Papio_anubis
ENSOPRG00000005199CPSF610099.472ENSPANG00000011641CPSF69799.472Papio_anubis
ENSOPRG00000005199CPSF65547.458ENSPKIG00000018054CPSF76647.205Paramormyrops_kingsleyae
ENSOPRG00000005199CPSF65893.902ENSPSIG00000016360CPSF67693.902Pelodiscus_sinensis
ENSOPRG00000005199CPSF66255.385ENSPEMG00000012648Cpsf77356.000Peromyscus_maniculatus_bairdii
ENSOPRG00000005199CPSF610099.296ENSPEMG00000007973Cpsf610099.296Peromyscus_maniculatus_bairdii
ENSOPRG00000005199CPSF65952.500ENSPCIG00000002551CPSF77955.191Phascolarctos_cinereus
ENSOPRG00000005199CPSF610098.944ENSPCIG00000019063CPSF69798.944Phascolarctos_cinereus
ENSOPRG00000005199CPSF68284.706ENSPFOG00000006990cpsf68984.706Poecilia_formosa
ENSOPRG00000005199CPSF65372.039ENSPMEG00000001353cpsf65069.333Poecilia_mexicana
ENSOPRG00000005199CPSF610092.958ENSPPYG00000004756CPSF69692.958Pongo_abelii
ENSOPRG00000005199CPSF65954.872ENSPPYG00000003188CPSF76755.429Pongo_abelii
ENSOPRG00000005199CPSF610099.472ENSPCAG00000011574CPSF69799.472Procavia_capensis
ENSOPRG00000005199CPSF65955.385ENSPCOG00000011976CPSF76756.000Propithecus_coquereli
ENSOPRG00000005199CPSF610099.121ENSPCOG00000024384CPSF69799.121Propithecus_coquereli
ENSOPRG00000005199CPSF65955.385ENSPVAG00000010675CPSF76756.000Pteropus_vampyrus
ENSOPRG00000005199CPSF610098.944ENSPVAG00000015753CPSF69798.944Pteropus_vampyrus
ENSOPRG00000005199CPSF65346.497ENSPNAG00000015073CPSF76846.061Pygocentrus_nattereri
ENSOPRG00000005199CPSF610092.958ENSRNOG00000005927Cpsf69692.958Rattus_norvegicus
ENSOPRG00000005199CPSF66254.872ENSRNOG00000020668Cpsf77355.814Rattus_norvegicus
ENSOPRG00000005199CPSF610099.121ENSRBIG00000042827CPSF69799.121Rhinopithecus_bieti
ENSOPRG00000005199CPSF66254.872ENSRBIG00000031429CPSF78654.857Rhinopithecus_bieti
ENSOPRG00000005199CPSF65954.872ENSRROG00000045009CPSF76755.429Rhinopithecus_roxellana
ENSOPRG00000005199CPSF610099.296ENSRROG00000042758CPSF69799.296Rhinopithecus_roxellana
ENSOPRG00000005199CPSF610099.297ENSSBOG00000010652CPSF610099.440Saimiri_boliviensis_boliviensis
ENSOPRG00000005199CPSF65954.872ENSSBOG00000018431CPSF76755.429Saimiri_boliviensis_boliviensis
ENSOPRG00000005199CPSF65954.822ENSSHAG00000011964CPSF76756.395Sarcophilus_harrisii
ENSOPRG00000005199CPSF65377.741ENSSHAG00000006635CPSF69486.347Sarcophilus_harrisii
ENSOPRG00000005199CPSF66842.157ENSSFOG00015010288cpsf77339.888Scleropages_formosus
ENSOPRG00000005199CPSF69592.551ENSSARG00000006743CPSF69192.551Sorex_araneus
ENSOPRG00000005199CPSF65956.250ENSSPUG00000019344CPSF76956.977Sphenodon_punctatus
ENSOPRG00000005199CPSF610099.472ENSSSCG00000038031CPSF610099.440Sus_scrofa
ENSOPRG00000005199CPSF65955.385ENSSSCG00000013083CPSF77955.429Sus_scrofa
ENSOPRG00000005199CPSF65751.111ENSTGUG00000006513CPSF76756.322Taeniopygia_guttata
ENSOPRG00000005199CPSF65955.385ENSUAMG00000017809CPSF76756.000Ursus_americanus
ENSOPRG00000005199CPSF69492.724ENSUAMG00000023492CPSF610092.724Ursus_americanus
ENSOPRG00000005199CPSF66255.385ENSUMAG00000011825CPSF77356.000Ursus_maritimus
ENSOPRG00000005199CPSF69499.440ENSUMAG00000020779CPSF610099.440Ursus_maritimus
ENSOPRG00000005199CPSF610099.472ENSVPAG00000008469CPSF610099.472Vicugna_pacos
ENSOPRG00000005199CPSF69499.440ENSVVUG00000010156-10099.440Vulpes_vulpes
ENSOPRG00000005199CPSF65955.385ENSVVUG00000004939CPSF77955.429Vulpes_vulpes
ENSOPRG00000005199CPSF69738.929ENSXETG00000006715cpsf76253.571Xenopus_tropicalis

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