EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000005248 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 29017 bases
Position: chrGeneScaffold_1964:983-29999
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000004825	TruB_N	PF01509.18	1.3e-21	1	1
ENSOPRP00000004825	PUA	PF01472.20	4.5e-18	1	1
ENSOPRP00000004825	DKCLD	PF08068.12	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000005251	DKC1-201	1506	-	ENSOPRP00000004825	501 (aa)	-	UPI00017A2129

Gene Model

Click here to download ENSOPRG00000005248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000005248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000005248	DKC1	100	75.639	ENSG00000130826	DKC1	87	89.617	Homo_sapiens
ENSOPRG00000005248	DKC1	69	79.539	ENSAPOG00000007799	dkc1	68	79.539	Acanthochromis_polyacanthus
ENSOPRG00000005248	DKC1	73	89.891	ENSAMEG00000002776	DKC1	72	89.891	Ailuropoda_melanoleuca
ENSOPRG00000005248	DKC1	69	80.460	ENSACIG00000022614	dkc1	73	80.460	Amphilophus_citrinellus
ENSOPRG00000005248	DKC1	69	80.000	ENSAOCG00000013159	dkc1	70	80.000	Amphiprion_ocellaris
ENSOPRG00000005248	DKC1	69	80.000	ENSAPEG00000002284	dkc1	70	80.000	Amphiprion_percula
ENSOPRG00000005248	DKC1	69	78.028	ENSATEG00000013682	dkc1	69	78.028	Anabas_testudineus
ENSOPRG00000005248	DKC1	70	83.761	ENSACAG00000015600	DKC1	61	83.761	Anolis_carolinensis
ENSOPRG00000005248	DKC1	100	74.460	ENSANAG00000022732	DKC1	99	74.853	Aotus_nancymaae
ENSOPRG00000005248	DKC1	69	80.172	ENSACLG00000015605	dkc1	71	80.172	Astatotilapia_calliptera
ENSOPRG00000005248	DKC1	70	80.286	ENSAMXG00000017108	dkc1	69	80.286	Astyanax_mexicanus
ENSOPRG00000005248	DKC1	73	89.344	ENSBTAG00000013045	DKC1	96	74.590	Bos_taurus
ENSOPRG00000005248	DKC1	71	61.625	WBGene00010478	K01G5.5	79	62.000	Caenorhabditis_elegans
ENSOPRG00000005248	DKC1	100	74.902	ENSCJAG00000004210	DKC1	99	74.706	Callithrix_jacchus
ENSOPRG00000005248	DKC1	70	79.143	ENSCAFG00000009311	-	68	79.143	Canis_familiaris
ENSOPRG00000005248	DKC1	73	89.617	ENSCAFG00000019620	-	71	89.617	Canis_familiaris
ENSOPRG00000005248	DKC1	70	78.286	ENSCAFG00020009379	-	66	78.286	Canis_lupus_dingo
ENSOPRG00000005248	DKC1	73	89.617	ENSCAFG00020008918	-	71	89.617	Canis_lupus_dingo
ENSOPRG00000005248	DKC1	73	89.617	ENSCHIG00000017392	DKC1	96	75.410	Capra_hircus
ENSOPRG00000005248	DKC1	89	90.437	ENSTSYG00000007681	DKC1	99	74.759	Carlito_syrichta
ENSOPRG00000005248	DKC1	57	99.296	ENSCAPG00000003342	DKC1	65	99.296	Cavia_aperea
ENSOPRG00000005248	DKC1	86	89.863	ENSCPOG00000008825	DKC1	96	75.356	Cavia_porcellus
ENSOPRG00000005248	DKC1	100	66.405	ENSCCAG00000027418	DKC1	99	66.601	Cebus_capucinus
ENSOPRG00000005248	DKC1	100	75.639	ENSCATG00000033602	DKC1	99	75.835	Cercocebus_atys
ENSOPRG00000005248	DKC1	90	89.589	ENSCLAG00000000720	DKC1	100	74.951	Chinchilla_lanigera
ENSOPRG00000005248	DKC1	100	75.639	ENSCSAG00000006706	DKC1	99	75.835	Chlorocebus_sabaeus
ENSOPRG00000005248	DKC1	70	84.615	ENSCPBG00000005858	DKC1	75	84.615	Chrysemys_picta_bellii
ENSOPRG00000005248	DKC1	68	75.581	ENSCING00000004599	-	67	75.216	Ciona_intestinalis
ENSOPRG00000005248	DKC1	69	74.640	ENSCSAVG00000010047	-	78	74.640	Ciona_savignyi
ENSOPRG00000005248	DKC1	100	75.639	ENSCANG00000027987	DKC1	99	75.835	Colobus_angolensis_palliatus
ENSOPRG00000005248	DKC1	87	89.344	ENSCGRG00001014574	-	86	89.344	Cricetulus_griseus_chok1gshd
ENSOPRG00000005248	DKC1	94	60.085	ENSCGRG00001016789	-	94	59.740	Cricetulus_griseus_chok1gshd
ENSOPRG00000005248	DKC1	96	59.336	ENSCGRG00000014809	-	92	59.740	Cricetulus_griseus_crigri
ENSOPRG00000005248	DKC1	87	89.344	ENSCGRG00000016075	-	86	89.344	Cricetulus_griseus_crigri
ENSOPRG00000005248	DKC1	71	78.310	ENSCSEG00000012633	dkc1	74	79.310	Cynoglossus_semilaevis
ENSOPRG00000005248	DKC1	70	78.857	ENSCVAG00000010155	dkc1	68	78.857	Cyprinodon_variegatus
ENSOPRG00000005248	DKC1	70	79.143	ENSDARG00000016484	dkc1	69	79.143	Danio_rerio
ENSOPRG00000005248	DKC1	86	89.617	ENSDNOG00000004218	DKC1	86	89.617	Dasypus_novemcinctus
ENSOPRG00000005248	DKC1	59	73.559	ENSDORG00000013566	-	98	73.559	Dipodomys_ordii
ENSOPRG00000005248	DKC1	70	69.714	FBgn0259937	Nop60B	89	59.113	Drosophila_melanogaster
ENSOPRG00000005248	DKC1	70	88.034	ENSETEG00000016095	DKC1	71	88.034	Echinops_telfairi
ENSOPRG00000005248	DKC1	67	71.598	ENSEBUG00000015962	dkc1	88	83.784	Eptatretus_burgeri
ENSOPRG00000005248	DKC1	90	89.891	ENSEASG00005007484	DKC1	87	89.891	Equus_asinus_asinus
ENSOPRG00000005248	DKC1	90	89.891	ENSECAG00000023524	DKC1	87	89.891	Equus_caballus
ENSOPRG00000005248	DKC1	68	86.842	ENSEEUG00000003323	DKC1	80	86.842	Erinaceus_europaeus
ENSOPRG00000005248	DKC1	69	79.885	ENSELUG00000014538	dkc1	70	79.885	Esox_lucius
ENSOPRG00000005248	DKC1	73	89.071	ENSFCAG00000006577	DKC1	72	89.071	Felis_catus
ENSOPRG00000005248	DKC1	70	80.952	ENSFALG00000011496	DKC1	68	80.952	Ficedula_albicollis
ENSOPRG00000005248	DKC1	88	89.617	ENSFDAG00000002516	DKC1	90	89.617	Fukomys_damarensis
ENSOPRG00000005248	DKC1	69	79.420	ENSFHEG00000004627	dkc1	69	79.420	Fundulus_heteroclitus
ENSOPRG00000005248	DKC1	68	76.385	ENSGMOG00000017277	dkc1	88	76.385	Gadus_morhua
ENSOPRG00000005248	DKC1	70	83.191	ENSGALG00000005054	DKC1	68	83.191	Gallus_gallus
ENSOPRG00000005248	DKC1	69	78.963	ENSGAFG00000011486	dkc1	60	78.963	Gambusia_affinis
ENSOPRG00000005248	DKC1	69	80.172	ENSGACG00000004373	dkc1	84	88.811	Gasterosteus_aculeatus
ENSOPRG00000005248	DKC1	70	84.900	ENSGAGG00000011330	DKC1	68	84.900	Gopherus_agassizii
ENSOPRG00000005248	DKC1	100	75.639	ENSGGOG00000001045	DKC1	99	75.442	Gorilla_gorilla
ENSOPRG00000005248	DKC1	69	80.172	ENSHBUG00000012436	dkc1	70	80.172	Haplochromis_burtoni
ENSOPRG00000005248	DKC1	73	89.617	ENSHGLG00000000649	DKC1	99	74.609	Heterocephalus_glaber_female
ENSOPRG00000005248	DKC1	73	89.589	ENSHGLG00100001153	DKC1	100	74.560	Heterocephalus_glaber_male
ENSOPRG00000005248	DKC1	69	79.251	ENSHCOG00000021099	dkc1	69	79.251	Hippocampus_comes
ENSOPRG00000005248	DKC1	69	80.290	ENSIPUG00000010309	dkc1	68	79.143	Ictalurus_punctatus
ENSOPRG00000005248	DKC1	86	79.121	ENSSTOG00000011904	-	82	79.121	Ictidomys_tridecemlineatus
ENSOPRG00000005248	DKC1	90	80.055	ENSSTOG00000020149	-	88	79.508	Ictidomys_tridecemlineatus
ENSOPRG00000005248	DKC1	81	89.891	ENSSTOG00000001074	-	83	89.891	Ictidomys_tridecemlineatus
ENSOPRG00000005248	DKC1	59	72.881	ENSJJAG00000010086	-	98	72.881	Jaculus_jaculus
ENSOPRG00000005248	DKC1	69	77.299	ENSKMAG00000008010	dkc1	70	77.522	Kryptolebias_marmoratus
ENSOPRG00000005248	DKC1	69	79.191	ENSLBEG00000019122	dkc1	71	79.023	Labrus_bergylta
ENSOPRG00000005248	DKC1	70	81.429	ENSLACG00000014025	DKC1	80	81.429	Latimeria_chalumnae
ENSOPRG00000005248	DKC1	69	81.609	ENSLOCG00000013713	dkc1	70	83.383	Lepisosteus_oculatus
ENSOPRG00000005248	DKC1	84	89.744	ENSLAFG00000000221	DKC1	83	89.744	Loxodonta_africana
ENSOPRG00000005248	DKC1	100	75.835	ENSMFAG00000032398	DKC1	85	76.031	Macaca_fascicularis
ENSOPRG00000005248	DKC1	100	75.639	ENSMMUG00000005768	DKC1	99	75.835	Macaca_mulatta
ENSOPRG00000005248	DKC1	100	75.639	ENSMNEG00000034503	DKC1	99	75.835	Macaca_nemestrina
ENSOPRG00000005248	DKC1	100	75.639	ENSMLEG00000034422	DKC1	99	75.835	Mandrillus_leucophaeus
ENSOPRG00000005248	DKC1	70	80.398	ENSMAMG00000005427	dkc1	78	81.034	Mastacembelus_armatus
ENSOPRG00000005248	DKC1	69	80.172	ENSMZEG00005014503	dkc1	70	80.172	Maylandia_zebra
ENSOPRG00000005248	DKC1	57	91.549	ENSMGAG00000009238	DKC1	62	91.549	Meleagris_gallopavo
ENSOPRG00000005248	DKC1	59	73.559	ENSMAUG00000016454	-	98	73.559	Mesocricetus_auratus
ENSOPRG00000005248	DKC1	90	89.617	ENSMICG00000038751	-	89	89.617	Microcebus_murinus
ENSOPRG00000005248	DKC1	74	83.860	ENSMICG00000002818	-	76	83.860	Microcebus_murinus
ENSOPRG00000005248	DKC1	59	70.508	ENSMOCG00000001169	-	98	70.508	Microtus_ochrogaster
ENSOPRG00000005248	DKC1	69	79.598	ENSMMOG00000020348	dkc1	76	79.598	Mola_mola
ENSOPRG00000005248	DKC1	69	84.348	ENSMODG00000009243	DKC1	60	84.348	Monodelphis_domestica
ENSOPRG00000005248	DKC1	69	79.310	ENSMALG00000009454	dkc1	69	79.310	Monopterus_albus
ENSOPRG00000005248	DKC1	99	63.992	MGP_CAROLIEiJ_G0033191	Dkc1	99	63.992	Mus_caroli
ENSOPRG00000005248	DKC1	97	74.438	ENSMUSG00000031403	Dkc1	98	73.559	Mus_musculus
ENSOPRG00000005248	DKC1	86	89.344	MGP_PahariEiJ_G0031735	Dkc1	98	73.559	Mus_pahari
ENSOPRG00000005248	DKC1	97	74.286	MGP_SPRETEiJ_G0034351	Dkc1	98	73.559	Mus_spretus
ENSOPRG00000005248	DKC1	73	89.891	ENSMPUG00000016136	DKC1	68	89.891	Mustela_putorius_furo
ENSOPRG00000005248	DKC1	73	84.384	ENSMLUG00000011918	DKC1	70	84.153	Myotis_lucifugus
ENSOPRG00000005248	DKC1	59	73.469	ENSNGAG00000015724	-	98	73.469	Nannospalax_galili
ENSOPRG00000005248	DKC1	69	80.172	ENSNBRG00000005638	dkc1	70	80.172	Neolamprologus_brichardi
ENSOPRG00000005248	DKC1	100	75.442	ENSNLEG00000014323	DKC1	99	75.246	Nomascus_leucogenys
ENSOPRG00000005248	DKC1	73	78.356	ENSMEUG00000001066	DKC1	77	79.143	Notamacropus_eugenii
ENSOPRG00000005248	DKC1	73	88.251	ENSODEG00000011816	-	99	73.465	Octodon_degus
ENSOPRG00000005248	DKC1	59	73.898	ENSODEG00000000549	-	98	73.898	Octodon_degus
ENSOPRG00000005248	DKC1	69	80.747	ENSONIG00000013889	dkc1	69	80.747	Oreochromis_niloticus
ENSOPRG00000005248	DKC1	67	88.427	ENSOANG00000008713	-	69	88.427	Ornithorhynchus_anatinus
ENSOPRG00000005248	DKC1	87	90.437	ENSOCUG00000012646	DKC1	85	90.437	Oryctolagus_cuniculus
ENSOPRG00000005248	DKC1	68	79.883	ENSORLG00000018748	dkc1	68	79.420	Oryzias_latipes
ENSOPRG00000005248	DKC1	69	79.310	ENSOMEG00000005786	dkc1	82	74.477	Oryzias_melastigma
ENSOPRG00000005248	DKC1	87	90.164	ENSOGAG00000003399	DKC1	86	90.164	Otolemur_garnettii
ENSOPRG00000005248	DKC1	73	89.344	ENSOARG00000003047	DKC1	96	75.205	Ovis_aries
ENSOPRG00000005248	DKC1	100	75.049	ENSPPAG00000023820	DKC1	99	75.049	Pan_paniscus
ENSOPRG00000005248	DKC1	73	89.071	ENSPPRG00000009104	DKC1	72	89.071	Panthera_pardus
ENSOPRG00000005248	DKC1	73	89.071	ENSPTIG00000017469	DKC1	74	89.071	Panthera_tigris_altaica
ENSOPRG00000005248	DKC1	100	75.639	ENSPTRG00000022449	DKC1	99	75.442	Pan_troglodytes
ENSOPRG00000005248	DKC1	97	75.610	ENSPTRG00000043416	-	83	75.813	Pan_troglodytes
ENSOPRG00000005248	DKC1	100	75.639	ENSPANG00000011978	DKC1	99	75.835	Papio_anubis
ENSOPRG00000005248	DKC1	69	81.449	ENSPKIG00000008443	dkc1	73	80.980	Paramormyrops_kingsleyae
ENSOPRG00000005248	DKC1	70	83.193	ENSPSIG00000013765	DKC1	82	85.714	Pelodiscus_sinensis
ENSOPRG00000005248	DKC1	69	76.724	ENSPMGG00000004097	dkc1	63	76.724	Periophthalmus_magnuspinnatus
ENSOPRG00000005248	DKC1	82	80.303	ENSPEMG00000013348	Dkc1	95	80.711	Peromyscus_maniculatus_bairdii
ENSOPRG00000005248	DKC1	70	84.000	ENSPCIG00000016706	DKC1	62	83.333	Phascolarctos_cinereus
ENSOPRG00000005248	DKC1	69	79.310	ENSPFOG00000018653	dkc1	70	79.310	Poecilia_formosa
ENSOPRG00000005248	DKC1	69	79.310	ENSPLAG00000003272	dkc1	63	79.310	Poecilia_latipinna
ENSOPRG00000005248	DKC1	69	79.310	ENSPMEG00000010413	dkc1	70	79.310	Poecilia_mexicana
ENSOPRG00000005248	DKC1	69	79.598	ENSPREG00000004100	dkc1	68	79.598	Poecilia_reticulata
ENSOPRG00000005248	DKC1	100	75.639	ENSPPYG00000020892	DKC1	100	75.835	Pongo_abelii
ENSOPRG00000005248	DKC1	57	97.183	ENSPCAG00000015034	DKC1	55	97.183	Procavia_capensis
ENSOPRG00000005248	DKC1	90	90.164	ENSPCOG00000026874	DKC1	89	90.164	Propithecus_coquereli
ENSOPRG00000005248	DKC1	73	88.219	ENSPVAG00000009222	DKC1	73	88.219	Pteropus_vampyrus
ENSOPRG00000005248	DKC1	69	80.172	ENSPNYG00000020063	dkc1	69	80.172	Pundamilia_nyererei
ENSOPRG00000005248	DKC1	70	80.000	ENSPNAG00000005780	dkc1	73	78.846	Pygocentrus_nattereri
ENSOPRG00000005248	DKC1	73	82.787	ENSRNOG00000055562	Dkc1	72	82.787	Rattus_norvegicus
ENSOPRG00000005248	DKC1	100	75.639	ENSRBIG00000028457	DKC1	85	75.835	Rhinopithecus_bieti
ENSOPRG00000005248	DKC1	100	75.639	ENSRROG00000044780	DKC1	99	75.835	Rhinopithecus_roxellana
ENSOPRG00000005248	DKC1	67	67.751	YLR175W	-	70	67.751	Saccharomyces_cerevisiae
ENSOPRG00000005248	DKC1	87	89.344	ENSSBOG00000033746	DKC1	96	74.390	Saimiri_boliviensis_boliviensis
ENSOPRG00000005248	DKC1	70	84.286	ENSSHAG00000002463	DKC1	74	84.286	Sarcophilus_harrisii
ENSOPRG00000005248	DKC1	70	81.143	ENSSFOG00015009585	dkc1	69	81.143	Scleropages_formosus
ENSOPRG00000005248	DKC1	70	80.571	ENSSMAG00000002552	dkc1	69	81.341	Scophthalmus_maximus
ENSOPRG00000005248	DKC1	69	80.000	ENSSDUG00000009963	dkc1	69	79.598	Seriola_dumerili
ENSOPRG00000005248	DKC1	69	80.000	ENSSLDG00000019342	dkc1	73	79.598	Seriola_lalandi_dorsalis
ENSOPRG00000005248	DKC1	73	81.319	ENSSARG00000001822	DKC1	73	81.319	Sorex_araneus
ENSOPRG00000005248	DKC1	70	84.330	ENSSPUG00000018907	DKC1	67	84.330	Sphenodon_punctatus
ENSOPRG00000005248	DKC1	69	79.827	ENSSPAG00000002585	dkc1	66	79.827	Stegastes_partitus
ENSOPRG00000005248	DKC1	73	88.798	ENSSSCG00000012823	DKC1	76	88.798	Sus_scrofa
ENSOPRG00000005248	DKC1	57	91.901	ENSTGUG00000006781	DKC1	63	91.901	Taeniopygia_guttata
ENSOPRG00000005248	DKC1	69	80.058	ENSTRUG00000004413	dkc1	70	80.058	Takifugu_rubripes
ENSOPRG00000005248	DKC1	69	61.364	ENSTNIG00000002582	dkc1	69	61.364	Tetraodon_nigroviridis
ENSOPRG00000005248	DKC1	71	88.448	ENSTTRG00000008089	DKC1	55	88.448	Tursiops_truncatus
ENSOPRG00000005248	DKC1	73	89.617	ENSUAMG00000022721	DKC1	82	84.921	Ursus_americanus
ENSOPRG00000005248	DKC1	73	89.071	ENSUMAG00000016899	DKC1	81	89.394	Ursus_maritimus
ENSOPRG00000005248	DKC1	73	87.936	ENSVVUG00000020734	-	64	87.936	Vulpes_vulpes
ENSOPRG00000005248	DKC1	70	72.727	ENSVVUG00000021671	-	67	71.662	Vulpes_vulpes
ENSOPRG00000005248	DKC1	70	81.429	ENSXETG00000032517	DKC1	70	81.429	Xenopus_tropicalis
ENSOPRG00000005248	DKC1	69	79.023	ENSXCOG00000005498	dkc1	75	79.023	Xiphophorus_couchianus
ENSOPRG00000005248	DKC1	69	79.023	ENSXMAG00000004919	dkc1	70	79.023	Xiphophorus_maculatus