EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000005302 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 41932 bases
Position: chrGeneScaffold_2298:213519-255450
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000004870	PRP4	PF08799.11	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000005300	PRPF4-201	1569	-	ENSOPRP00000004870	522 (aa)	-	UPI0001778FD9

Gene Model

Click here to download ENSOPRG00000005302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000005302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000005302	PRPF4	56	31.884	ENSOPRG00000008831	POC1A	65	31.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000005302	PRPF4	100	98.851	ENSG00000136875	PRPF4	100	98.851	Homo_sapiens
ENSOPRG00000005302	PRPF4	96	77.615	ENSAPOG00000014132	prpf4	98	77.615	Acanthochromis_polyacanthus
ENSOPRG00000005302	PRPF4	100	98.851	ENSAMEG00000013048	PRPF4	98	98.851	Ailuropoda_melanoleuca
ENSOPRG00000005302	PRPF4	96	77.381	ENSACIG00000005579	prpf4	99	77.381	Amphilophus_citrinellus
ENSOPRG00000005302	PRPF4	96	77.030	ENSAOCG00000005457	prpf4	99	77.030	Amphiprion_ocellaris
ENSOPRG00000005302	PRPF4	96	76.832	ENSAPEG00000000776	prpf4	99	76.832	Amphiprion_percula
ENSOPRG00000005302	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSOPRG00000005302	PRPF4	99	89.595	ENSAPLG00000006534	PRPF4	96	90.448	Anas_platyrhynchos
ENSOPRG00000005302	PRPF4	100	89.504	ENSACAG00000015110	PRPF4	100	89.504	Anolis_carolinensis
ENSOPRG00000005302	PRPF4	100	99.042	ENSANAG00000022464	PRPF4	96	99.042	Aotus_nancymaae
ENSOPRG00000005302	PRPF4	96	77.183	ENSACLG00000019031	prpf4	99	77.183	Astatotilapia_calliptera
ENSOPRG00000005302	PRPF4	97	62.188	ENSAMXG00000006756	prpf4	99	73.069	Astyanax_mexicanus
ENSOPRG00000005302	PRPF4	100	98.084	ENSBTAG00000004571	PRPF4	100	98.084	Bos_taurus
ENSOPRG00000005302	PRPF4	90	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSOPRG00000005302	PRPF4	100	99.234	ENSCJAG00000017856	PRPF4	100	99.234	Callithrix_jacchus
ENSOPRG00000005302	PRPF4	100	98.851	ENSCAFG00000003224	PRPF4	97	98.851	Canis_familiaris
ENSOPRG00000005302	PRPF4	100	98.851	ENSCAFG00020022637	PRPF4	100	98.851	Canis_lupus_dingo
ENSOPRG00000005302	PRPF4	100	98.659	ENSCHIG00000024648	-	100	98.659	Capra_hircus
ENSOPRG00000005302	PRPF4	100	98.659	ENSTSYG00000010366	PRPF4	100	98.659	Carlito_syrichta
ENSOPRG00000005302	PRPF4	88	88.067	ENSCAPG00000008935	PRPF4	97	88.067	Cavia_aperea
ENSOPRG00000005302	PRPF4	100	91.762	ENSCPOG00000014729	-	100	91.762	Cavia_porcellus
ENSOPRG00000005302	PRPF4	100	98.276	ENSCPOG00000010747	-	100	98.276	Cavia_porcellus
ENSOPRG00000005302	PRPF4	100	98.851	ENSCCAG00000028990	PRPF4	100	98.851	Cebus_capucinus
ENSOPRG00000005302	PRPF4	100	98.659	ENSCATG00000021552	PRPF4	100	98.659	Cercocebus_atys
ENSOPRG00000005302	PRPF4	100	98.467	ENSCLAG00000013448	PRPF4	100	98.467	Chinchilla_lanigera
ENSOPRG00000005302	PRPF4	87	95.575	ENSCHOG00000007233	PRPF4	100	95.575	Choloepus_hoffmanni
ENSOPRG00000005302	PRPF4	99	90.909	ENSCPBG00000019136	PRPF4	74	90.909	Chrysemys_picta_bellii
ENSOPRG00000005302	PRPF4	96	59.449	ENSCING00000001299	-	97	58.812	Ciona_intestinalis
ENSOPRG00000005302	PRPF4	96	57.738	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSOPRG00000005302	PRPF4	100	98.851	ENSCANG00000003246	PRPF4	100	98.851	Colobus_angolensis_palliatus
ENSOPRG00000005302	PRPF4	100	98.659	ENSCGRG00001016992	Prpf4	100	98.659	Cricetulus_griseus_chok1gshd
ENSOPRG00000005302	PRPF4	100	98.659	ENSCGRG00000017560	Prpf4	100	98.659	Cricetulus_griseus_crigri
ENSOPRG00000005302	PRPF4	97	76.040	ENSCSEG00000020451	prpf4	99	76.040	Cynoglossus_semilaevis
ENSOPRG00000005302	PRPF4	97	79.604	ENSDARG00000067639	prpf4	99	79.604	Danio_rerio
ENSOPRG00000005302	PRPF4	100	97.701	ENSDNOG00000013203	PRPF4	100	97.701	Dasypus_novemcinctus
ENSOPRG00000005302	PRPF4	100	99.042	ENSDORG00000026275	Prpf4	100	99.042	Dipodomys_ordii
ENSOPRG00000005302	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSOPRG00000005302	PRPF4	100	96.941	ENSETEG00000020389	PRPF4	100	96.941	Echinops_telfairi
ENSOPRG00000005302	PRPF4	95	72.811	ENSEBUG00000015229	prpf4	86	73.272	Eptatretus_burgeri
ENSOPRG00000005302	PRPF4	100	99.042	ENSEASG00005022678	PRPF4	100	99.042	Equus_asinus_asinus
ENSOPRG00000005302	PRPF4	100	99.127	ENSECAG00000007072	PRPF4	100	99.042	Equus_caballus
ENSOPRG00000005302	PRPF4	100	78.603	ENSEEUG00000007480	PRPF4	100	78.603	Erinaceus_europaeus
ENSOPRG00000005302	PRPF4	97	80.594	ENSELUG00000007510	prpf4	99	80.594	Esox_lucius
ENSOPRG00000005302	PRPF4	100	99.234	ENSFCAG00000005514	PRPF4	100	99.234	Felis_catus
ENSOPRG00000005302	PRPF4	98	88.196	ENSFALG00000005423	PRPF4	90	86.022	Ficedula_albicollis
ENSOPRG00000005302	PRPF4	100	98.276	ENSFDAG00000005839	PRPF4	100	98.276	Fukomys_damarensis
ENSOPRG00000005302	PRPF4	96	76.587	ENSFHEG00000001300	prpf4	99	76.587	Fundulus_heteroclitus
ENSOPRG00000005302	PRPF4	98	90.215	ENSGALG00000008857	PRPF4	96	89.864	Gallus_gallus
ENSOPRG00000005302	PRPF4	65	70.588	ENSGAFG00000012164	prpf4	70	70.588	Gambusia_affinis
ENSOPRG00000005302	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSOPRG00000005302	PRPF4	99	90.716	ENSGAGG00000025029	PRPF4	96	90.716	Gopherus_agassizii
ENSOPRG00000005302	PRPF4	100	98.659	ENSGGOG00000006943	PRPF4	100	98.659	Gorilla_gorilla
ENSOPRG00000005302	PRPF4	96	77.183	ENSHBUG00000000562	prpf4	99	77.183	Haplochromis_burtoni
ENSOPRG00000005302	PRPF4	100	81.107	ENSHGLG00000016628	-	100	81.870	Heterocephalus_glaber_female
ENSOPRG00000005302	PRPF4	100	98.276	ENSHGLG00000015191	PRPF4	100	98.276	Heterocephalus_glaber_female
ENSOPRG00000005302	PRPF4	100	79.693	ENSHGLG00000003838	-	100	79.693	Heterocephalus_glaber_female
ENSOPRG00000005302	PRPF4	100	79.693	ENSHGLG00100005571	-	100	79.693	Heterocephalus_glaber_male
ENSOPRG00000005302	PRPF4	97	78.614	ENSIPUG00000017956	PRPF4	99	78.614	Ictalurus_punctatus
ENSOPRG00000005302	PRPF4	100	98.467	ENSSTOG00000027833	PRPF4	100	98.467	Ictidomys_tridecemlineatus
ENSOPRG00000005302	PRPF4	100	98.659	ENSJJAG00000008838	Prpf4	100	98.659	Jaculus_jaculus
ENSOPRG00000005302	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSOPRG00000005302	PRPF4	96	76.295	ENSLBEG00000020611	prpf4	99	76.295	Labrus_bergylta
ENSOPRG00000005302	PRPF4	98	80.664	ENSLACG00000016317	PRPF4	98	80.664	Latimeria_chalumnae
ENSOPRG00000005302	PRPF4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSOPRG00000005302	PRPF4	100	97.701	ENSLAFG00000018225	PRPF4	100	97.701	Loxodonta_africana
ENSOPRG00000005302	PRPF4	100	98.467	ENSMFAG00000039397	PRPF4	100	98.467	Macaca_fascicularis
ENSOPRG00000005302	PRPF4	100	98.659	ENSMMUG00000005844	PRPF4	100	98.659	Macaca_mulatta
ENSOPRG00000005302	PRPF4	100	86.973	ENSMNEG00000033737	PRPF4	100	87.931	Macaca_nemestrina
ENSOPRG00000005302	PRPF4	100	98.659	ENSMLEG00000040284	PRPF4	100	98.659	Mandrillus_leucophaeus
ENSOPRG00000005302	PRPF4	97	76.331	ENSMAMG00000020141	prpf4	99	76.331	Mastacembelus_armatus
ENSOPRG00000005302	PRPF4	96	77.183	ENSMZEG00005023205	prpf4	99	77.183	Maylandia_zebra
ENSOPRG00000005302	PRPF4	99	88.484	ENSMGAG00000001796	PRPF4	97	88.484	Meleagris_gallopavo
ENSOPRG00000005302	PRPF4	100	98.467	ENSMAUG00000018022	Prpf4	100	98.467	Mesocricetus_auratus
ENSOPRG00000005302	PRPF4	100	98.084	ENSMICG00000015022	PRPF4	100	98.084	Microcebus_murinus
ENSOPRG00000005302	PRPF4	100	98.084	ENSMOCG00000018273	Prpf4	100	98.084	Microtus_ochrogaster
ENSOPRG00000005302	PRPF4	97	75.050	ENSMMOG00000021177	prpf4	99	75.050	Mola_mola
ENSOPRG00000005302	PRPF4	100	94.466	ENSMODG00000004444	-	100	94.466	Monodelphis_domestica
ENSOPRG00000005302	PRPF4	100	94.455	ENSMODG00000025096	-	97	94.455	Monodelphis_domestica
ENSOPRG00000005302	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSOPRG00000005302	PRPF4	100	98.467	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.467	Mus_caroli
ENSOPRG00000005302	PRPF4	100	98.467	ENSMUSG00000066148	Prpf4	100	98.467	Mus_musculus
ENSOPRG00000005302	PRPF4	100	98.276	MGP_PahariEiJ_G0028413	Prpf4	100	98.276	Mus_pahari
ENSOPRG00000005302	PRPF4	100	98.467	MGP_SPRETEiJ_G0027042	Prpf4	100	98.467	Mus_spretus
ENSOPRG00000005302	PRPF4	100	98.851	ENSMPUG00000007883	PRPF4	100	98.851	Mustela_putorius_furo
ENSOPRG00000005302	PRPF4	100	96.552	ENSMLUG00000008626	-	97	96.552	Myotis_lucifugus
ENSOPRG00000005302	PRPF4	100	98.467	ENSMLUG00000015309	-	97	98.467	Myotis_lucifugus
ENSOPRG00000005302	PRPF4	100	93.295	ENSNGAG00000000468	Prpf4	100	93.295	Nannospalax_galili
ENSOPRG00000005302	PRPF4	96	77.381	ENSNBRG00000007972	prpf4	99	77.381	Neolamprologus_brichardi
ENSOPRG00000005302	PRPF4	100	99.042	ENSNLEG00000016647	PRPF4	100	99.042	Nomascus_leucogenys
ENSOPRG00000005302	PRPF4	98	95.108	ENSMEUG00000013256	PRPF4	100	95.136	Notamacropus_eugenii
ENSOPRG00000005302	PRPF4	100	98.659	ENSODEG00000018147	PRPF4	100	98.659	Octodon_degus
ENSOPRG00000005302	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	77.183	Oreochromis_niloticus
ENSOPRG00000005302	PRPF4	100	99.234	ENSOCUG00000005046	PRPF4	100	99.234	Oryctolagus_cuniculus
ENSOPRG00000005302	PRPF4	96	75.400	ENSORLG00000019641	prpf4	98	75.400	Oryzias_latipes
ENSOPRG00000005302	PRPF4	96	75.400	ENSORLG00020019438	prpf4	98	75.400	Oryzias_latipes_hni
ENSOPRG00000005302	PRPF4	96	75.158	ENSOMEG00000020941	prpf4	99	75.158	Oryzias_melastigma
ENSOPRG00000005302	PRPF4	100	93.678	ENSOGAG00000007802	PRPF4	98	93.678	Otolemur_garnettii
ENSOPRG00000005302	PRPF4	100	98.467	ENSOARG00000006319	PRPF4	97	98.467	Ovis_aries
ENSOPRG00000005302	PRPF4	100	98.659	ENSPPAG00000041797	PRPF4	100	98.659	Pan_paniscus
ENSOPRG00000005302	PRPF4	100	99.042	ENSPPRG00000014360	PRPF4	100	99.042	Panthera_pardus
ENSOPRG00000005302	PRPF4	100	99.042	ENSPTIG00000009574	PRPF4	100	99.042	Panthera_tigris_altaica
ENSOPRG00000005302	PRPF4	100	98.851	ENSPTRG00000021274	PRPF4	100	98.851	Pan_troglodytes
ENSOPRG00000005302	PRPF4	100	98.467	ENSPANG00000025776	PRPF4	96	98.467	Papio_anubis
ENSOPRG00000005302	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSOPRG00000005302	PRPF4	98	90.856	ENSPSIG00000010713	PRPF4	90	90.856	Pelodiscus_sinensis
ENSOPRG00000005302	PRPF4	99	58.867	ENSPMGG00000000997	prpf4	99	58.867	Periophthalmus_magnuspinnatus
ENSOPRG00000005302	PRPF4	100	98.659	ENSPEMG00000024115	Prpf4	100	98.659	Peromyscus_maniculatus_bairdii
ENSOPRG00000005302	PRPF4	98	95.108	ENSPCIG00000003821	PRPF4	99	95.136	Phascolarctos_cinereus
ENSOPRG00000005302	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSOPRG00000005302	PRPF4	84	69.822	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSOPRG00000005302	PRPF4	91	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSOPRG00000005302	PRPF4	98	98.638	ENSPCAG00000002561	PRPF4	100	98.638	Procavia_capensis
ENSOPRG00000005302	PRPF4	100	98.467	ENSPCOG00000011975	PRPF4	100	98.467	Propithecus_coquereli
ENSOPRG00000005302	PRPF4	100	95.211	ENSPVAG00000004708	PRPF4	100	95.211	Pteropus_vampyrus
ENSOPRG00000005302	PRPF4	96	77.183	ENSPNYG00000008013	prpf4	99	77.183	Pundamilia_nyererei
ENSOPRG00000005302	PRPF4	97	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSOPRG00000005302	PRPF4	100	98.276	ENSRNOG00000014777	Prpf4	100	98.276	Rattus_norvegicus
ENSOPRG00000005302	PRPF4	100	98.851	ENSRBIG00000040221	PRPF4	100	98.851	Rhinopithecus_bieti
ENSOPRG00000005302	PRPF4	100	98.851	ENSRROG00000040240	PRPF4	100	98.851	Rhinopithecus_roxellana
ENSOPRG00000005302	PRPF4	100	95.038	ENSSHAG00000017658	PRPF4	100	95.038	Sarcophilus_harrisii
ENSOPRG00000005302	PRPF4	97	82.178	ENSSFOG00015008963	prpf4	99	82.178	Scleropages_formosus
ENSOPRG00000005302	PRPF4	96	75.794	ENSSMAG00000008889	prpf4	99	75.794	Scophthalmus_maximus
ENSOPRG00000005302	PRPF4	96	73.705	ENSSDUG00000022083	prpf4	97	73.800	Seriola_dumerili
ENSOPRG00000005302	PRPF4	96	73.904	ENSSLDG00000008115	prpf4	98	73.705	Seriola_lalandi_dorsalis
ENSOPRG00000005302	PRPF4	100	90.038	ENSSPUG00000015582	PRPF4	100	90.038	Sphenodon_punctatus
ENSOPRG00000005302	PRPF4	96	71.598	ENSSPAG00000011286	prpf4	99	71.598	Stegastes_partitus
ENSOPRG00000005302	PRPF4	100	99.042	ENSSSCG00000024648	PRPF4	100	99.042	Sus_scrofa
ENSOPRG00000005302	PRPF4	94	91.002	ENSTGUG00000002623	PRPF4	100	91.002	Taeniopygia_guttata
ENSOPRG00000005302	PRPF4	97	75.099	ENSTRUG00000008853	prpf4	99	75.099	Takifugu_rubripes
ENSOPRG00000005302	PRPF4	97	75.050	ENSTNIG00000013250	prpf4	99	75.050	Tetraodon_nigroviridis
ENSOPRG00000005302	PRPF4	100	90.230	ENSTBEG00000000821	PRPF4	100	90.230	Tupaia_belangeri
ENSOPRG00000005302	PRPF4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSOPRG00000005302	PRPF4	64	95.522	ENSUAMG00000018288	PRPF4	90	95.522	Ursus_americanus
ENSOPRG00000005302	PRPF4	100	98.084	ENSUMAG00000019375	PRPF4	100	98.084	Ursus_maritimus
ENSOPRG00000005302	PRPF4	100	98.659	ENSVPAG00000005281	PRPF4	100	98.659	Vicugna_pacos
ENSOPRG00000005302	PRPF4	100	97.719	ENSVVUG00000002476	PRPF4	100	97.719	Vulpes_vulpes
ENSOPRG00000005302	PRPF4	69	58.333	ENSXCOG00000006101	prpf4	93	59.606	Xiphophorus_couchianus
ENSOPRG00000005302	PRPF4	87	64.629	ENSXMAG00000002750	prpf4	98	65.941	Xiphophorus_maculatus