EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000005597 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 1998 bases
Position: chrGeneScaffold_5076:99160-101157
Accession: 101534464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000005129	RRM_1	PF00076.22	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000005587	PABPN1L-201	819	XM_004584090	ENSOPRP00000005129	273 (aa)	XP_004584147	UPI0001776AD7

Gene Model

Click here to download ENSOPRG00000005597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000005597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000005597	PABPN1L	100	67.500	ENSG00000205022	PABPN1L	100	68.817	Homo_sapiens
ENSOPRG00000005597	PABPN1L	68	51.852	ENSAPOG00000000685	PABPN1L	57	51.852	Acanthochromis_polyacanthus
ENSOPRG00000005597	PABPN1L	56	57.962	ENSACIG00000021400	PABPN1L	81	57.962	Amphilophus_citrinellus
ENSOPRG00000005597	PABPN1L	61	50.595	ENSAOCG00000019844	PABPN1L	68	50.000	Amphiprion_ocellaris
ENSOPRG00000005597	PABPN1L	61	50.595	ENSAPEG00000019534	PABPN1L	68	50.000	Amphiprion_percula
ENSOPRG00000005597	PABPN1L	56	57.325	ENSATEG00000011646	PABPN1L	69	52.850	Anabas_testudineus
ENSOPRG00000005597	PABPN1L	71	58.974	ENSACAG00000013250	PABPN1L	99	58.974	Anolis_carolinensis
ENSOPRG00000005597	PABPN1L	100	64.388	ENSANAG00000038178	PABPN1L	100	64.982	Aotus_nancymaae
ENSOPRG00000005597	PABPN1L	75	48.792	ENSACLG00000025147	PABPN1L	70	50.980	Astatotilapia_calliptera
ENSOPRG00000005597	PABPN1L	55	55.705	ENSAMXG00000010873	PABPN1L	61	53.988	Astyanax_mexicanus
ENSOPRG00000005597	PABPN1L	100	65.836	ENSBTAG00000023752	-	100	66.192	Bos_taurus
ENSOPRG00000005597	PABPN1L	52	78.322	ENSBTAG00000006727	-	86	78.322	Bos_taurus
ENSOPRG00000005597	PABPN1L	100	65.704	ENSCJAG00000045284	PABPN1L	100	67.266	Callithrix_jacchus
ENSOPRG00000005597	PABPN1L	100	62.676	ENSCHIG00000013987	PABPN1L	100	62.676	Capra_hircus
ENSOPRG00000005597	PABPN1L	95	65.299	ENSCAPG00000007240	PABPN1L	100	66.418	Cavia_aperea
ENSOPRG00000005597	PABPN1L	100	67.153	ENSCPOG00000025951	PABPN1L	100	68.248	Cavia_porcellus
ENSOPRG00000005597	PABPN1L	100	66.065	ENSCCAG00000027631	PABPN1L	100	67.266	Cebus_capucinus
ENSOPRG00000005597	PABPN1L	100	69.565	ENSCATG00000031060	PABPN1L	100	70.397	Cercocebus_atys
ENSOPRG00000005597	PABPN1L	100	68.498	ENSCLAG00000000704	PABPN1L	100	68.498	Chinchilla_lanigera
ENSOPRG00000005597	PABPN1L	100	66.894	ENSCSAG00000002881	PABPN1L	100	67.235	Chlorocebus_sabaeus
ENSOPRG00000005597	PABPN1L	71	55.330	ENSCPBG00000023441	PABPN1L	61	57.576	Chrysemys_picta_bellii
ENSOPRG00000005597	PABPN1L	100	67.626	ENSCANG00000039336	PABPN1L	100	68.817	Colobus_angolensis_palliatus
ENSOPRG00000005597	PABPN1L	100	70.290	ENSCGRG00001013211	Pabpn1l	100	70.290	Cricetulus_griseus_chok1gshd
ENSOPRG00000005597	PABPN1L	100	70.290	ENSCGRG00000015868	Pabpn1l	100	70.290	Cricetulus_griseus_crigri
ENSOPRG00000005597	PABPN1L	100	56.537	ENSDNOG00000034677	PABPN1L	100	57.951	Dasypus_novemcinctus
ENSOPRG00000005597	PABPN1L	100	70.036	ENSEASG00005000777	PABPN1L	100	70.036	Equus_asinus_asinus
ENSOPRG00000005597	PABPN1L	100	69.314	ENSECAG00000000378	PABPN1L	100	69.314	Equus_caballus
ENSOPRG00000005597	PABPN1L	100	61.538	ENSEEUG00000004747	PABPN1L	100	61.538	Erinaceus_europaeus
ENSOPRG00000005597	PABPN1L	55	55.333	ENSELUG00000018385	PABPN1L	57	55.921	Esox_lucius
ENSOPRG00000005597	PABPN1L	100	68.571	ENSFCAG00000010465	PABPN1L	100	68.571	Felis_catus
ENSOPRG00000005597	PABPN1L	73	57.071	ENSFALG00000003319	PABPN1L	79	57.071	Ficedula_albicollis
ENSOPRG00000005597	PABPN1L	100	68.132	ENSFDAG00000021067	PABPN1L	100	68.132	Fukomys_damarensis
ENSOPRG00000005597	PABPN1L	59	52.761	ENSFHEG00000018295	PABPN1L	71	51.244	Fundulus_heteroclitus
ENSOPRG00000005597	PABPN1L	59	62.195	ENSGALG00000006242	PABPN1L	93	62.195	Gallus_gallus
ENSOPRG00000005597	PABPN1L	61	48.256	ENSGACG00000015428	PABPN1L	67	49.490	Gasterosteus_aculeatus
ENSOPRG00000005597	PABPN1L	66	56.906	ENSGAGG00000010613	PABPN1L	59	56.906	Gopherus_agassizii
ENSOPRG00000005597	PABPN1L	100	68.116	ENSGGOG00000012670	PABPN1L	100	68.592	Gorilla_gorilla
ENSOPRG00000005597	PABPN1L	75	48.309	ENSHBUG00000002388	PABPN1L	71	50.732	Haplochromis_burtoni
ENSOPRG00000005597	PABPN1L	96	67.433	ENSHGLG00000014207	PABPN1L	100	67.433	Heterocephalus_glaber_female
ENSOPRG00000005597	PABPN1L	96	67.433	ENSHGLG00100005230	PABPN1L	100	67.433	Heterocephalus_glaber_male
ENSOPRG00000005597	PABPN1L	62	51.163	ENSHCOG00000004151	PABPN1L	69	52.239	Hippocampus_comes
ENSOPRG00000005597	PABPN1L	100	66.429	ENSSTOG00000020814	PABPN1L	100	66.786	Ictidomys_tridecemlineatus
ENSOPRG00000005597	PABPN1L	100	71.377	ENSJJAG00000006433	Pabpn1l	100	71.377	Jaculus_jaculus
ENSOPRG00000005597	PABPN1L	59	50.920	ENSLBEG00000011647	PABPN1L	66	48.990	Labrus_bergylta
ENSOPRG00000005597	PABPN1L	71	69.036	ENSLAFG00000025902	-	78	69.036	Loxodonta_africana
ENSOPRG00000005597	PABPN1L	100	69.203	ENSMFAG00000002924	PABPN1L	100	70.036	Macaca_fascicularis
ENSOPRG00000005597	PABPN1L	100	68.478	ENSMMUG00000012438	PABPN1L	100	69.314	Macaca_mulatta
ENSOPRG00000005597	PABPN1L	100	68.841	ENSMNEG00000044808	PABPN1L	100	69.675	Macaca_nemestrina
ENSOPRG00000005597	PABPN1L	100	69.203	ENSMLEG00000032667	PABPN1L	100	70.036	Mandrillus_leucophaeus
ENSOPRG00000005597	PABPN1L	75	48.792	ENSMZEG00005002186	PABPN1L	70	50.980	Maylandia_zebra
ENSOPRG00000005597	PABPN1L	100	68.864	ENSMAUG00000014032	Pabpn1l	100	68.939	Mesocricetus_auratus
ENSOPRG00000005597	PABPN1L	100	72.826	ENSMICG00000028179	PABPN1L	100	72.826	Microcebus_murinus
ENSOPRG00000005597	PABPN1L	100	69.597	ENSMOCG00000007955	Pabpn1l	100	69.597	Microtus_ochrogaster
ENSOPRG00000005597	PABPN1L	100	51.625	ENSMODG00000003873	-	100	52.347	Monodelphis_domestica
ENSOPRG00000005597	PABPN1L	62	51.176	ENSMALG00000016926	PABPN1L	66	50.000	Monopterus_albus
ENSOPRG00000005597	PABPN1L	100	66.545	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	66.545	Mus_caroli
ENSOPRG00000005597	PABPN1L	100	67.148	ENSMUSG00000069867	Pabpn1l	100	67.148	Mus_musculus
ENSOPRG00000005597	PABPN1L	100	66.787	MGP_PahariEiJ_G0023268	Pabpn1l	100	66.787	Mus_pahari
ENSOPRG00000005597	PABPN1L	100	66.426	MGP_SPRETEiJ_G0032788	Pabpn1l	100	66.426	Mus_spretus
ENSOPRG00000005597	PABPN1L	96	53.309	ENSMLUG00000003228	PABPN1L	95	53.309	Myotis_lucifugus
ENSOPRG00000005597	PABPN1L	100	71.795	ENSNGAG00000023992	Pabpn1l	100	71.795	Nannospalax_galili
ENSOPRG00000005597	PABPN1L	54	58.000	ENSNBRG00000017078	PABPN1L	72	52.356	Neolamprologus_brichardi
ENSOPRG00000005597	PABPN1L	100	61.458	ENSODEG00000004649	PABPN1L	100	61.458	Octodon_degus
ENSOPRG00000005597	PABPN1L	100	53.285	ENSOANG00000013901	PABPN1L	100	55.109	Ornithorhynchus_anatinus
ENSOPRG00000005597	PABPN1L	63	53.216	ENSORLG00000026560	PABPN1L	59	55.346	Oryzias_latipes
ENSOPRG00000005597	PABPN1L	63	53.216	ENSORLG00020015068	PABPN1L	59	55.346	Oryzias_latipes_hni
ENSOPRG00000005597	PABPN1L	63	53.216	ENSORLG00015000397	PABPN1L	59	55.346	Oryzias_latipes_hsok
ENSOPRG00000005597	PABPN1L	100	70.290	ENSOGAG00000000433	PABPN1L	100	70.652	Otolemur_garnettii
ENSOPRG00000005597	PABPN1L	100	63.487	ENSOARG00000013682	PABPN1L	100	64.145	Ovis_aries
ENSOPRG00000005597	PABPN1L	100	67.857	ENSPPAG00000028866	PABPN1L	100	69.534	Pan_paniscus
ENSOPRG00000005597	PABPN1L	100	68.929	ENSPPRG00000015106	PABPN1L	100	68.929	Panthera_pardus
ENSOPRG00000005597	PABPN1L	93	62.791	ENSPTIG00000015606	PABPN1L	100	62.791	Panthera_tigris_altaica
ENSOPRG00000005597	PABPN1L	100	67.857	ENSPTRG00000031120	PABPN1L	100	69.534	Pan_troglodytes
ENSOPRG00000005597	PABPN1L	100	69.203	ENSPANG00000026039	PABPN1L	100	70.036	Papio_anubis
ENSOPRG00000005597	PABPN1L	71	54.271	ENSPSIG00000003404	PABPN1L	100	56.784	Pelodiscus_sinensis
ENSOPRG00000005597	PABPN1L	100	68.498	ENSPEMG00000016624	Pabpn1l	100	68.498	Peromyscus_maniculatus_bairdii
ENSOPRG00000005597	PABPN1L	52	63.699	ENSPCIG00000007038	-	99	63.699	Phascolarctos_cinereus
ENSOPRG00000005597	PABPN1L	100	68.100	ENSPPYG00000007655	PABPN1L	100	70.357	Pongo_abelii
ENSOPRG00000005597	PABPN1L	100	72.826	ENSPCOG00000024077	PABPN1L	100	73.913	Propithecus_coquereli
ENSOPRG00000005597	PABPN1L	100	67.491	ENSPVAG00000002716	PABPN1L	100	68.551	Pteropus_vampyrus
ENSOPRG00000005597	PABPN1L	75	48.792	ENSPNYG00000004803	PABPN1L	70	50.980	Pundamilia_nyererei
ENSOPRG00000005597	PABPN1L	100	70.696	ENSRNOG00000029558	Pabpn1l	100	70.696	Rattus_norvegicus
ENSOPRG00000005597	PABPN1L	100	70.290	ENSRBIG00000030740	PABPN1L	100	71.119	Rhinopithecus_bieti
ENSOPRG00000005597	PABPN1L	100	70.397	ENSRROG00000032240	-	100	71.119	Rhinopithecus_roxellana
ENSOPRG00000005597	PABPN1L	99	69.091	ENSRROG00000035483	-	99	70.290	Rhinopithecus_roxellana
ENSOPRG00000005597	PABPN1L	100	66.787	ENSSBOG00000018410	PABPN1L	100	67.986	Saimiri_boliviensis_boliviensis
ENSOPRG00000005597	PABPN1L	100	50.523	ENSSHAG00000010001	-	100	50.523	Sarcophilus_harrisii
ENSOPRG00000005597	PABPN1L	60	50.920	ENSSMAG00000021348	PABPN1L	60	52.663	Scophthalmus_maximus
ENSOPRG00000005597	PABPN1L	61	50.595	ENSSDUG00000006986	PABPN1L	71	49.505	Seriola_dumerili
ENSOPRG00000005597	PABPN1L	61	50.595	ENSSLDG00000021845	PABPN1L	71	49.505	Seriola_lalandi_dorsalis
ENSOPRG00000005597	PABPN1L	94	54.086	ENSSARG00000005178	-	99	54.086	Sorex_araneus
ENSOPRG00000005597	PABPN1L	71	58.247	ENSSPUG00000007031	PABPN1L	84	58.462	Sphenodon_punctatus
ENSOPRG00000005597	PABPN1L	75	49.038	ENSSPAG00000017978	PABPN1L	71	50.000	Stegastes_partitus
ENSOPRG00000005597	PABPN1L	100	62.411	ENSSSCG00000036367	PABPN1L	100	69.784	Sus_scrofa
ENSOPRG00000005597	PABPN1L	59	50.307	ENSTRUG00000024725	PABPN1L	76	49.500	Takifugu_rubripes
ENSOPRG00000005597	PABPN1L	100	66.667	ENSTTRG00000004691	PABPN1L	100	68.571	Tursiops_truncatus
ENSOPRG00000005597	PABPN1L	57	51.205	ENSXETG00000011258	pabpn1l	92	48.357	Xenopus_tropicalis