EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000005819 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 123927 bases
Position: chrGeneScaffold_4552:38594-162520
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000005366	Ago_hook	PF10427.9	3.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000005845	TNRC6A-201	5913	-	ENSOPRP00000005366	1970 (aa)	-	UPI00017A28AB

Gene Model

Click here to download ENSOPRG00000005819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000005819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000005819	TNRC6A	77	50.388	ENSOPRG00000012054	TNRC6B	53	50.362

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000005819	TNRC6A	96	99.254	ENSG00000090905	TNRC6A	96	99.254	Homo_sapiens
ENSOPRG00000005819	TNRC6A	93	99.254	ENSAMEG00000009333	TNRC6A	96	99.254	Ailuropoda_melanoleuca
ENSOPRG00000005819	TNRC6A	93	93.284	ENSAPLG00000009978	TNRC6A	95	93.284	Anas_platyrhynchos
ENSOPRG00000005819	TNRC6A	96	59.048	ENSACAG00000011857	TNRC6A	95	63.423	Anolis_carolinensis
ENSOPRG00000005819	TNRC6A	96	99.627	ENSANAG00000025252	TNRC6A	96	99.627	Aotus_nancymaae
ENSOPRG00000005819	TNRC6A	86	74.349	ENSAMXG00000019919	tnrc6a	95	74.349	Astyanax_mexicanus
ENSOPRG00000005819	TNRC6A	96	98.881	ENSBTAG00000017999	TNRC6A	95	98.881	Bos_taurus
ENSOPRG00000005819	TNRC6A	96	99.627	ENSCJAG00000020677	TNRC6A	96	99.627	Callithrix_jacchus
ENSOPRG00000005819	TNRC6A	96	99.627	ENSCAFG00000017531	TNRC6A	96	99.627	Canis_familiaris
ENSOPRG00000005819	TNRC6A	94	91.791	ENSCAFG00020021160	TNRC6A	94	91.791	Canis_lupus_dingo
ENSOPRG00000005819	TNRC6A	96	97.015	ENSCHIG00000019448	TNRC6A	95	97.938	Capra_hircus
ENSOPRG00000005819	TNRC6A	96	99.254	ENSTSYG00000012711	TNRC6A	96	99.254	Carlito_syrichta
ENSOPRG00000005819	TNRC6A	96	99.254	ENSCPOG00000036684	TNRC6A	96	99.254	Cavia_porcellus
ENSOPRG00000005819	TNRC6A	96	99.627	ENSCCAG00000033664	TNRC6A	96	99.627	Cebus_capucinus
ENSOPRG00000005819	TNRC6A	95	99.627	ENSCATG00000019284	TNRC6A	96	99.627	Cercocebus_atys
ENSOPRG00000005819	TNRC6A	96	91.791	ENSCLAG00000010217	TNRC6A	95	91.791	Chinchilla_lanigera
ENSOPRG00000005819	TNRC6A	96	99.627	ENSCSAG00000006561	TNRC6A	96	99.627	Chlorocebus_sabaeus
ENSOPRG00000005819	TNRC6A	88	99.254	ENSCHOG00000009374	TNRC6A	88	99.254	Choloepus_hoffmanni
ENSOPRG00000005819	TNRC6A	86	92.910	ENSCPBG00000001881	TNRC6A	95	92.910	Chrysemys_picta_bellii
ENSOPRG00000005819	TNRC6A	96	99.627	ENSCANG00000041549	TNRC6A	96	99.627	Colobus_angolensis_palliatus
ENSOPRG00000005819	TNRC6A	96	98.881	ENSCGRG00001015021	Tnrc6a	95	98.881	Cricetulus_griseus_chok1gshd
ENSOPRG00000005819	TNRC6A	96	98.881	ENSCGRG00000013351	Tnrc6a	96	98.881	Cricetulus_griseus_crigri
ENSOPRG00000005819	TNRC6A	86	75.000	ENSDARG00000079688	tnrc6a	95	75.000	Danio_rerio
ENSOPRG00000005819	TNRC6A	94	98.881	ENSDNOG00000013989	TNRC6A	94	98.881	Dasypus_novemcinctus
ENSOPRG00000005819	TNRC6A	93	92.164	ENSETEG00000014658	TNRC6A	94	92.164	Echinops_telfairi
ENSOPRG00000005819	TNRC6A	96	98.507	ENSEASG00005017693	TNRC6A	96	98.507	Equus_asinus_asinus
ENSOPRG00000005819	TNRC6A	96	98.134	ENSECAG00000025056	TNRC6A	96	98.134	Equus_caballus
ENSOPRG00000005819	TNRC6A	93	87.373	ENSEEUG00000004530	TNRC6A	95	87.246	Erinaceus_europaeus
ENSOPRG00000005819	TNRC6A	96	98.507	ENSFCAG00000025236	TNRC6A	96	98.507	Felis_catus
ENSOPRG00000005819	TNRC6A	96	93.657	ENSFALG00000003757	TNRC6A	95	93.657	Ficedula_albicollis
ENSOPRG00000005819	TNRC6A	86	93.284	ENSGALG00000006068	TNRC6A	95	93.284	Gallus_gallus
ENSOPRG00000005819	TNRC6A	86	93.284	ENSGAGG00000023209	TNRC6A	95	93.284	Gopherus_agassizii
ENSOPRG00000005819	TNRC6A	95	99.254	ENSGGOG00000005137	TNRC6A	96	99.254	Gorilla_gorilla
ENSOPRG00000005819	TNRC6A	96	90.672	ENSHGLG00000012474	-	96	89.963	Heterocephalus_glaber_female
ENSOPRG00000005819	TNRC6A	90	76.834	ENSHGLG00000007368	-	95	76.448	Heterocephalus_glaber_female
ENSOPRG00000005819	TNRC6A	96	90.152	ENSHGLG00100012496	-	95	89.434	Heterocephalus_glaber_male
ENSOPRG00000005819	TNRC6A	96	99.627	ENSSTOG00000023394	TNRC6A	94	99.627	Ictidomys_tridecemlineatus
ENSOPRG00000005819	TNRC6A	93	84.328	ENSLACG00000006277	TNRC6A	96	84.328	Latimeria_chalumnae
ENSOPRG00000005819	TNRC6A	96	82.090	ENSLOCG00000005517	tnrc6a	93	82.090	Lepisosteus_oculatus
ENSOPRG00000005819	TNRC6A	93	99.254	ENSLAFG00000004209	TNRC6A	95	99.254	Loxodonta_africana
ENSOPRG00000005819	TNRC6A	93	99.627	ENSMFAG00000003824	TNRC6A	95	99.627	Macaca_fascicularis
ENSOPRG00000005819	TNRC6A	96	99.627	ENSMMUG00000020428	TNRC6A	96	99.627	Macaca_mulatta
ENSOPRG00000005819	TNRC6A	96	99.627	ENSMNEG00000034854	TNRC6A	96	99.627	Macaca_nemestrina
ENSOPRG00000005819	TNRC6A	93	99.627	ENSMLEG00000042737	TNRC6A	93	99.627	Mandrillus_leucophaeus
ENSOPRG00000005819	TNRC6A	96	92.910	ENSMGAG00000006455	TNRC6A	96	92.910	Meleagris_gallopavo
ENSOPRG00000005819	TNRC6A	96	99.254	ENSMAUG00000012750	Tnrc6a	95	99.254	Mesocricetus_auratus
ENSOPRG00000005819	TNRC6A	96	99.627	ENSMICG00000030685	TNRC6A	96	99.627	Microcebus_murinus
ENSOPRG00000005819	TNRC6A	96	99.254	ENSMOCG00000000152	Tnrc6a	95	99.254	Microtus_ochrogaster
ENSOPRG00000005819	TNRC6A	96	82.993	ENSMODG00000016348	TNRC6A	94	84.014	Monodelphis_domestica
ENSOPRG00000005819	TNRC6A	95	98.881	MGP_CAROLIEiJ_G0030425	Tnrc6a	95	98.881	Mus_caroli
ENSOPRG00000005819	TNRC6A	96	98.507	ENSMUSG00000052707	Tnrc6a	95	98.507	Mus_musculus
ENSOPRG00000005819	TNRC6A	95	98.881	MGP_PahariEiJ_G0013635	Tnrc6a	95	98.881	Mus_pahari
ENSOPRG00000005819	TNRC6A	96	98.507	MGP_SPRETEiJ_G0031539	Tnrc6a	96	98.507	Mus_spretus
ENSOPRG00000005819	TNRC6A	93	99.254	ENSMPUG00000012324	TNRC6A	95	99.254	Mustela_putorius_furo
ENSOPRG00000005819	TNRC6A	93	97.761	ENSMLUG00000002701	TNRC6A	96	97.761	Myotis_lucifugus
ENSOPRG00000005819	TNRC6A	96	98.881	ENSNGAG00000020702	Tnrc6a	96	98.881	Nannospalax_galili
ENSOPRG00000005819	TNRC6A	93	91.882	ENSNLEG00000011851	TNRC6A	94	91.513	Nomascus_leucogenys
ENSOPRG00000005819	TNRC6A	73	93.657	ENSMEUG00000015959	-	73	93.657	Notamacropus_eugenii
ENSOPRG00000005819	TNRC6A	95	95.522	ENSODEG00000012802	TNRC6A	95	95.522	Octodon_degus
ENSOPRG00000005819	TNRC6A	83	94.030	ENSOANG00000007672	TNRC6A	94	94.030	Ornithorhynchus_anatinus
ENSOPRG00000005819	TNRC6A	93	98.881	ENSOCUG00000004325	TNRC6A	95	98.881	Oryctolagus_cuniculus
ENSOPRG00000005819	TNRC6A	95	99.627	ENSOGAG00000006666	TNRC6A	96	99.627	Otolemur_garnettii
ENSOPRG00000005819	TNRC6A	95	98.881	ENSOARG00000017950	TNRC6A	96	98.881	Ovis_aries
ENSOPRG00000005819	TNRC6A	96	98.881	ENSPPAG00000028379	TNRC6A	96	98.881	Pan_paniscus
ENSOPRG00000005819	TNRC6A	96	98.507	ENSPPRG00000005861	TNRC6A	96	98.507	Panthera_pardus
ENSOPRG00000005819	TNRC6A	96	98.507	ENSPTIG00000006346	TNRC6A	96	98.507	Panthera_tigris_altaica
ENSOPRG00000005819	TNRC6A	95	99.254	ENSPTRG00000007898	TNRC6A	95	99.254	Pan_troglodytes
ENSOPRG00000005819	TNRC6A	96	99.627	ENSPANG00000018523	TNRC6A	98	99.627	Papio_anubis
ENSOPRG00000005819	TNRC6A	86	76.493	ENSPKIG00000012859	tnrc6a	92	76.493	Paramormyrops_kingsleyae
ENSOPRG00000005819	TNRC6A	72	92.537	ENSPSIG00000003965	TNRC6A	97	92.537	Pelodiscus_sinensis
ENSOPRG00000005819	TNRC6A	96	99.627	ENSPEMG00000016318	Tnrc6a	96	99.627	Peromyscus_maniculatus_bairdii
ENSOPRG00000005819	TNRC6A	93	93.657	ENSPCIG00000012106	TNRC6A	96	93.657	Phascolarctos_cinereus
ENSOPRG00000005819	TNRC6A	96	99.254	ENSPPYG00000007202	TNRC6A	96	99.254	Pongo_abelii
ENSOPRG00000005819	TNRC6A	88	100.000	ENSPCAG00000008260	TNRC6A	87	100.000	Procavia_capensis
ENSOPRG00000005819	TNRC6A	96	99.627	ENSPCOG00000010134	TNRC6A	96	99.627	Propithecus_coquereli
ENSOPRG00000005819	TNRC6A	85	87.931	ENSPVAG00000012066	TNRC6A	95	87.931	Pteropus_vampyrus
ENSOPRG00000005819	TNRC6A	96	99.627	ENSRNOG00000024737	Tnrc6a	96	99.627	Rattus_norvegicus
ENSOPRG00000005819	TNRC6A	93	99.627	ENSRBIG00000014222	TNRC6A	95	99.627	Rhinopithecus_bieti
ENSOPRG00000005819	TNRC6A	96	99.627	ENSRROG00000032360	TNRC6A	96	99.627	Rhinopithecus_roxellana
ENSOPRG00000005819	TNRC6A	93	99.627	ENSSBOG00000036197	TNRC6A	95	99.627	Saimiri_boliviensis_boliviensis
ENSOPRG00000005819	TNRC6A	86	82.993	ENSSHAG00000008811	TNRC6A	99	80.090	Sarcophilus_harrisii
ENSOPRG00000005819	TNRC6A	86	80.597	ENSSFOG00015008920	tnrc6a	94	80.597	Scleropages_formosus
ENSOPRG00000005819	TNRC6A	72	78.986	ENSSARG00000002479	TNRC6A	89	78.261	Sorex_araneus
ENSOPRG00000005819	TNRC6A	85	88.848	ENSSPUG00000010525	TNRC6A	95	88.848	Sphenodon_punctatus
ENSOPRG00000005819	TNRC6A	96	99.254	ENSSSCG00000038870	TNRC6A	95	99.254	Sus_scrofa
ENSOPRG00000005819	TNRC6A	96	93.284	ENSTGUG00000006142	TNRC6A	95	93.284	Taeniopygia_guttata
ENSOPRG00000005819	TNRC6A	93	99.248	ENSTBEG00000014965	TNRC6A	95	99.248	Tupaia_belangeri
ENSOPRG00000005819	TNRC6A	89	97.761	ENSTTRG00000002008	TNRC6A	88	97.761	Tursiops_truncatus
ENSOPRG00000005819	TNRC6A	79	87.890	ENSUAMG00000006656	-	93	87.699	Ursus_americanus
ENSOPRG00000005819	TNRC6A	94	99.627	ENSUMAG00000008274	TNRC6A	95	99.627	Ursus_maritimus
ENSOPRG00000005819	TNRC6A	53	86.940	ENSVPAG00000010764	-	52	86.940	Vicugna_pacos
ENSOPRG00000005819	TNRC6A	95	99.627	ENSVVUG00000005380	TNRC6A	95	99.627	Vulpes_vulpes
ENSOPRG00000005819	TNRC6A	89	83.270	ENSXETG00000030437	TNRC6A	95	83.270	Xenopus_tropicalis