EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000006034 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 4000 bases
Position: chrGeneScaffold_1233:233691-237690
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000005535	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000006027	-	357	-	ENSOPRP00000005535	119 (aa)	-	UPI00017A296E

Gene Model

Click here to download ENSOPRG00000006034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000006034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000006034	-	87	39.048	ENSOPRG00000004472	RAB33A	50	39.048
ENSOPRG00000006034	-	91	37.273	ENSOPRG00000001073	RAB33B	62	37.273
ENSOPRG00000006034	-	92	35.455	ENSOPRG00000014416	-	94	35.455
ENSOPRG00000006034	-	92	33.028	ENSOPRG00000008255	RAB5C	57	33.028
ENSOPRG00000006034	-	93	48.649	ENSOPRG00000007436	-	60	48.649
ENSOPRG00000006034	-	89	35.849	ENSOPRG00000006595	RAB1A	50	35.849
ENSOPRG00000006034	-	92	33.945	ENSOPRG00000011278	RAB5A	57	33.945
ENSOPRG00000006034	-	98	32.479	ENSOPRG00000007883	RAB5B	51	32.479
ENSOPRG00000006034	-	89	35.849	ENSOPRG00000007511	RAB30	82	35.849
ENSOPRG00000006034	-	94	37.500	ENSOPRG00000010355	RAB6A	55	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000006034	-	88	57.143	ENSACAG00000016658	-	51	57.143	Anolis_carolinensis
ENSOPRG00000006034	-	97	78.632	ENSETEG00000008991	-	76	78.632	Echinops_telfairi
ENSOPRG00000006034	-	99	54.237	ENSFALG00000003276	-	52	54.237	Ficedula_albicollis
ENSOPRG00000006034	-	93	47.748	ENSGACG00000019767	-	52	47.748	Gasterosteus_aculeatus
ENSOPRG00000006034	-	97	76.724	ENSLAFG00000000202	-	62	76.724	Loxodonta_africana
ENSOPRG00000006034	-	97	73.276	ENSMLUG00000010706	-	60	73.276	Myotis_lucifugus
ENSOPRG00000006034	-	96	70.175	ENSMEUG00000004712	-	76	70.175	Notamacropus_eugenii
ENSOPRG00000006034	-	92	47.273	ENSONIG00000011542	-	63	47.273	Oreochromis_niloticus
ENSOPRG00000006034	-	88	65.714	ENSPSIG00000002522	-	63	65.714	Pelodiscus_sinensis
ENSOPRG00000006034	-	97	75.000	ENSPVAG00000014624	-	76	75.000	Pteropus_vampyrus
ENSOPRG00000006034	-	100	52.941	ENSTGUG00000017468	-	53	52.941	Taeniopygia_guttata
ENSOPRG00000006034	-	92	49.091	ENSTNIG00000008784	-	63	49.091	Tetraodon_nigroviridis
ENSOPRG00000006034	-	92	46.364	ENSTNIG00000001448	-	61	46.364	Tetraodon_nigroviridis