EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000006801 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 329562 bases
Position: chrGeneScaffold_2873:162003-491564
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000006243	Upf2	PF04050.14	1.3e-32	1	1
ENSOPRP00000006243	MIF4G	PF02854.19	9.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000006815	-	3777	-	ENSOPRP00000006243	1259 (aa)	-	UPI00017782A5

Gene Model

Click here to download ENSOPRG00000006801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000006801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000006801	-	78	100.000	ENSG00000151461	UPF2	76	100.000	Homo_sapiens
ENSOPRG00000006801	-	73	94.366	ENSAPOG00000015837	UPF2	73	94.366	Acanthochromis_polyacanthus
ENSOPRG00000006801	-	82	100.000	ENSAMEG00000004586	UPF2	82	100.000	Ailuropoda_melanoleuca
ENSOPRG00000006801	-	73	94.366	ENSACIG00000018078	UPF2	72	94.366	Amphilophus_citrinellus
ENSOPRG00000006801	-	73	94.366	ENSAOCG00000016766	UPF2	72	94.366	Amphiprion_ocellaris
ENSOPRG00000006801	-	73	94.366	ENSAPEG00000019084	UPF2	72	94.366	Amphiprion_percula
ENSOPRG00000006801	-	73	93.662	ENSATEG00000021677	UPF2	72	93.662	Anabas_testudineus
ENSOPRG00000006801	-	78	98.592	ENSAPLG00000010287	UPF2	76	98.592	Anas_platyrhynchos
ENSOPRG00000006801	-	78	97.887	ENSACAG00000009259	UPF2	77	97.887	Anolis_carolinensis
ENSOPRG00000006801	-	73	100.000	ENSANAG00000028451	UPF2	72	100.000	Aotus_nancymaae
ENSOPRG00000006801	-	73	93.662	ENSACLG00000012696	UPF2	72	93.662	Astatotilapia_calliptera
ENSOPRG00000006801	-	73	90.845	ENSAMXG00000013700	UPF2	71	90.845	Astyanax_mexicanus
ENSOPRG00000006801	-	77	100.000	ENSBTAG00000000288	UPF2	76	100.000	Bos_taurus
ENSOPRG00000006801	-	78	100.000	ENSCJAG00000020685	UPF2	76	100.000	Callithrix_jacchus
ENSOPRG00000006801	-	82	100.000	ENSCAFG00000004839	UPF2	82	100.000	Canis_familiaris
ENSOPRG00000006801	-	82	100.000	ENSCAFG00020005882	UPF2	82	100.000	Canis_lupus_dingo
ENSOPRG00000006801	-	77	100.000	ENSCHIG00000020359	UPF2	76	100.000	Capra_hircus
ENSOPRG00000006801	-	82	100.000	ENSTSYG00000000935	UPF2	82	100.000	Carlito_syrichta
ENSOPRG00000006801	-	73	91.048	ENSCAPG00000016658	UPF2	75	89.956	Cavia_aperea
ENSOPRG00000006801	-	81	100.000	ENSCPOG00000008809	UPF2	82	100.000	Cavia_porcellus
ENSOPRG00000006801	-	76	97.817	ENSCCAG00000035991	UPF2	75	100.000	Cebus_capucinus
ENSOPRG00000006801	-	78	100.000	ENSCATG00000032679	UPF2	76	100.000	Cercocebus_atys
ENSOPRG00000006801	-	82	100.000	ENSCLAG00000011434	UPF2	82	100.000	Chinchilla_lanigera
ENSOPRG00000006801	-	78	100.000	ENSCSAG00000013372	UPF2	76	100.000	Chlorocebus_sabaeus
ENSOPRG00000006801	-	63	100.000	ENSCHOG00000000422	UPF2	64	100.000	Choloepus_hoffmanni
ENSOPRG00000006801	-	82	97.887	ENSCPBG00000027823	UPF2	78	97.887	Chrysemys_picta_bellii
ENSOPRG00000006801	-	67	58.451	ENSCSAVG00000007772	-	84	58.451	Ciona_savignyi
ENSOPRG00000006801	-	78	100.000	ENSCANG00000040396	UPF2	76	100.000	Colobus_angolensis_palliatus
ENSOPRG00000006801	-	82	99.296	ENSCGRG00001019347	Upf2	82	99.296	Cricetulus_griseus_chok1gshd
ENSOPRG00000006801	-	82	99.296	ENSCGRG00000017993	Upf2	82	99.296	Cricetulus_griseus_crigri
ENSOPRG00000006801	-	73	92.254	ENSCSEG00000003520	UPF2	71	92.254	Cynoglossus_semilaevis
ENSOPRG00000006801	-	73	94.366	ENSCVAG00000006167	UPF2	73	94.366	Cyprinodon_variegatus
ENSOPRG00000006801	-	82	100.000	ENSDNOG00000018160	UPF2	82	100.000	Dasypus_novemcinctus
ENSOPRG00000006801	-	82	99.296	ENSDORG00000002478	Upf2	82	99.296	Dipodomys_ordii
ENSOPRG00000006801	-	72	35.915	FBgn0029992	Upf2	57	42.982	Drosophila_melanogaster
ENSOPRG00000006801	-	60	100.000	ENSETEG00000011583	-	58	100.000	Echinops_telfairi
ENSOPRG00000006801	-	57	79.365	ENSEBUG00000012448	-	70	79.365	Eptatretus_burgeri
ENSOPRG00000006801	-	82	100.000	ENSEASG00005019274	UPF2	87	100.000	Equus_asinus_asinus
ENSOPRG00000006801	-	82	100.000	ENSECAG00000017022	UPF2	82	100.000	Equus_caballus
ENSOPRG00000006801	-	70	93.226	ENSEEUG00000007819	UPF2	70	93.226	Erinaceus_europaeus
ENSOPRG00000006801	-	82	92.958	ENSELUG00000012014	UPF2	72	92.958	Esox_lucius
ENSOPRG00000006801	-	77	100.000	ENSFCAG00000005785	UPF2	76	100.000	Felis_catus
ENSOPRG00000006801	-	78	98.592	ENSFALG00000001889	UPF2	80	98.592	Ficedula_albicollis
ENSOPRG00000006801	-	82	100.000	ENSFDAG00000014348	UPF2	82	100.000	Fukomys_damarensis
ENSOPRG00000006801	-	73	95.070	ENSFHEG00000009826	UPF2	73	95.070	Fundulus_heteroclitus
ENSOPRG00000006801	-	73	90.845	ENSGMOG00000005557	UPF2	72	90.845	Gadus_morhua
ENSOPRG00000006801	-	78	98.592	ENSGALG00000033772	UPF2	82	98.592	Gallus_gallus
ENSOPRG00000006801	-	73	92.254	ENSGAFG00000020867	UPF2	72	92.254	Gambusia_affinis
ENSOPRG00000006801	-	73	93.662	ENSGACG00000001080	UPF2	72	93.662	Gasterosteus_aculeatus
ENSOPRG00000006801	-	77	97.887	ENSGAGG00000002700	UPF2	77	97.887	Gopherus_agassizii
ENSOPRG00000006801	-	78	100.000	ENSGGOG00000001479	UPF2	76	100.000	Gorilla_gorilla
ENSOPRG00000006801	-	73	93.662	ENSHBUG00000004249	UPF2	72	93.662	Haplochromis_burtoni
ENSOPRG00000006801	-	77	96.479	ENSHGLG00000003822	-	80	96.479	Heterocephalus_glaber_female
ENSOPRG00000006801	-	82	100.000	ENSHGLG00000015176	-	82	100.000	Heterocephalus_glaber_female
ENSOPRG00000006801	-	81	100.000	ENSHGLG00100010036	UPF2	83	100.000	Heterocephalus_glaber_male
ENSOPRG00000006801	-	73	94.366	ENSHCOG00000004025	UPF2	72	94.366	Hippocampus_comes
ENSOPRG00000006801	-	73	90.141	ENSIPUG00000015524	UPF2	72	90.141	Ictalurus_punctatus
ENSOPRG00000006801	-	82	100.000	ENSSTOG00000013075	UPF2	82	100.000	Ictidomys_tridecemlineatus
ENSOPRG00000006801	-	77	100.000	ENSJJAG00000004913	Upf2	77	100.000	Jaculus_jaculus
ENSOPRG00000006801	-	73	92.254	ENSKMAG00000001071	UPF2	73	92.254	Kryptolebias_marmoratus
ENSOPRG00000006801	-	73	93.662	ENSLBEG00000016394	-	72	93.662	Labrus_bergylta
ENSOPRG00000006801	-	52	88.732	ENSLBEG00000000728	-	60	88.732	Labrus_bergylta
ENSOPRG00000006801	-	73	88.865	ENSLACG00000015945	UPF2	73	88.865	Latimeria_chalumnae
ENSOPRG00000006801	-	73	93.662	ENSLOCG00000015698	UPF2	73	93.662	Lepisosteus_oculatus
ENSOPRG00000006801	-	78	100.000	ENSMFAG00000043865	UPF2	76	100.000	Macaca_fascicularis
ENSOPRG00000006801	-	78	100.000	ENSMMUG00000008241	UPF2	76	100.000	Macaca_mulatta
ENSOPRG00000006801	-	58	100.000	ENSMNEG00000008062	UPF2	71	100.000	Macaca_nemestrina
ENSOPRG00000006801	-	78	100.000	ENSMLEG00000036120	UPF2	76	100.000	Mandrillus_leucophaeus
ENSOPRG00000006801	-	73	93.662	ENSMAMG00000018276	UPF2	72	93.662	Mastacembelus_armatus
ENSOPRG00000006801	-	73	93.662	ENSMZEG00005021595	UPF2	72	93.662	Maylandia_zebra
ENSOPRG00000006801	-	77	98.592	ENSMGAG00000004573	UPF2	77	98.592	Meleagris_gallopavo
ENSOPRG00000006801	-	82	99.296	ENSMAUG00000016512	Upf2	81	99.296	Mesocricetus_auratus
ENSOPRG00000006801	-	77	100.000	ENSMICG00000001716	UPF2	81	100.000	Microcebus_murinus
ENSOPRG00000006801	-	77	98.592	ENSMOCG00000008263	Upf2	76	98.592	Microtus_ochrogaster
ENSOPRG00000006801	-	73	94.366	ENSMMOG00000006528	UPF2	72	94.366	Mola_mola
ENSOPRG00000006801	-	77	97.887	ENSMODG00000016794	UPF2	76	97.887	Monodelphis_domestica
ENSOPRG00000006801	-	73	93.662	ENSMALG00000002663	UPF2	72	93.662	Monopterus_albus
ENSOPRG00000006801	-	82	99.296	MGP_CAROLIEiJ_G0023157	Upf2	84	99.187	Mus_caroli
ENSOPRG00000006801	-	82	99.296	ENSMUSG00000043241	Upf2	84	99.187	Mus_musculus
ENSOPRG00000006801	-	82	99.296	MGP_PahariEiJ_G0019217	Upf2	84	99.187	Mus_pahari
ENSOPRG00000006801	-	82	99.296	MGP_SPRETEiJ_G0024075	Upf2	84	99.187	Mus_spretus
ENSOPRG00000006801	-	77	100.000	ENSMPUG00000001064	UPF2	82	100.000	Mustela_putorius_furo
ENSOPRG00000006801	-	82	99.296	ENSMLUG00000000228	UPF2	82	99.296	Myotis_lucifugus
ENSOPRG00000006801	-	73	93.662	ENSNBRG00000013629	UPF2	72	93.662	Neolamprologus_brichardi
ENSOPRG00000006801	-	78	100.000	ENSNLEG00000012058	UPF2	76	100.000	Nomascus_leucogenys
ENSOPRG00000006801	-	82	100.000	ENSODEG00000001290	UPF2	82	100.000	Octodon_degus
ENSOPRG00000006801	-	73	93.662	ENSONIG00000017991	UPF2	72	93.662	Oreochromis_niloticus
ENSOPRG00000006801	-	82	100.000	ENSOCUG00000006230	UPF2	81	100.000	Oryctolagus_cuniculus
ENSOPRG00000006801	-	73	92.958	ENSORLG00000017189	UPF2	72	92.958	Oryzias_latipes
ENSOPRG00000006801	-	73	92.958	ENSORLG00020005969	UPF2	72	92.958	Oryzias_latipes_hni
ENSOPRG00000006801	-	73	92.958	ENSORLG00015005713	UPF2	72	92.958	Oryzias_latipes_hsok
ENSOPRG00000006801	-	73	93.662	ENSOMEG00000023420	UPF2	74	93.662	Oryzias_melastigma
ENSOPRG00000006801	-	77	100.000	ENSOGAG00000005796	UPF2	76	100.000	Otolemur_garnettii
ENSOPRG00000006801	-	77	100.000	ENSOARG00000014587	UPF2	77	100.000	Ovis_aries
ENSOPRG00000006801	-	77	100.000	ENSPPAG00000037953	UPF2	76	100.000	Pan_paniscus
ENSOPRG00000006801	-	77	100.000	ENSPPRG00000000690	UPF2	76	100.000	Panthera_pardus
ENSOPRG00000006801	-	77	100.000	ENSPTIG00000008867	UPF2	76	100.000	Panthera_tigris_altaica
ENSOPRG00000006801	-	78	100.000	ENSPTRG00000002291	UPF2	76	100.000	Pan_troglodytes
ENSOPRG00000006801	-	78	100.000	ENSPANG00000023399	UPF2	76	100.000	Papio_anubis
ENSOPRG00000006801	-	73	91.549	ENSPKIG00000025502	UPF2	72	91.549	Paramormyrops_kingsleyae
ENSOPRG00000006801	-	73	92.958	ENSPMGG00000005259	UPF2	72	92.958	Periophthalmus_magnuspinnatus
ENSOPRG00000006801	-	70	97.351	ENSPEMG00000015731	Upf2	75	97.351	Peromyscus_maniculatus_bairdii
ENSOPRG00000006801	-	77	98.592	ENSPCIG00000006656	UPF2	77	98.592	Phascolarctos_cinereus
ENSOPRG00000006801	-	73	93.662	ENSPFOG00000017118	UPF2	72	93.662	Poecilia_formosa
ENSOPRG00000006801	-	73	93.662	ENSPLAG00000005094	UPF2	72	93.662	Poecilia_latipinna
ENSOPRG00000006801	-	73	93.662	ENSPMEG00000017009	UPF2	72	93.662	Poecilia_mexicana
ENSOPRG00000006801	-	73	93.662	ENSPREG00000021880	UPF2	72	93.662	Poecilia_reticulata
ENSOPRG00000006801	-	54	100.000	ENSPPYG00000002089	-	81	100.000	Pongo_abelii
ENSOPRG00000006801	-	77	96.507	ENSPCAG00000000684	UPF2	77	96.507	Procavia_capensis
ENSOPRG00000006801	-	82	100.000	ENSPCOG00000021656	UPF2	81	100.000	Propithecus_coquereli
ENSOPRG00000006801	-	82	100.000	ENSPVAG00000017286	UPF2	82	100.000	Pteropus_vampyrus
ENSOPRG00000006801	-	70	93.662	ENSPNYG00000017096	UPF2	71	93.662	Pundamilia_nyererei
ENSOPRG00000006801	-	73	92.254	ENSPNAG00000009357	UPF2	73	92.254	Pygocentrus_nattereri
ENSOPRG00000006801	-	77	98.592	ENSRNOG00000023593	Upf2	97	100.000	Rattus_norvegicus
ENSOPRG00000006801	-	78	100.000	ENSRBIG00000037780	UPF2	77	100.000	Rhinopithecus_bieti
ENSOPRG00000006801	-	78	100.000	ENSRROG00000043547	UPF2	76	100.000	Rhinopithecus_roxellana
ENSOPRG00000006801	-	78	100.000	ENSSBOG00000020012	UPF2	76	100.000	Saimiri_boliviensis_boliviensis
ENSOPRG00000006801	-	73	90.141	ENSSFOG00015023788	upf2	73	90.141	Scleropages_formosus
ENSOPRG00000006801	-	73	92.958	ENSSMAG00000007637	UPF2	72	92.958	Scophthalmus_maximus
ENSOPRG00000006801	-	73	94.366	ENSSDUG00000017244	UPF2	71	94.366	Seriola_dumerili
ENSOPRG00000006801	-	73	94.366	ENSSLDG00000016866	UPF2	72	94.366	Seriola_lalandi_dorsalis
ENSOPRG00000006801	-	82	100.000	ENSSARG00000008615	UPF2	76	100.000	Sorex_araneus
ENSOPRG00000006801	-	78	97.183	ENSSPUG00000014544	UPF2	80	95.349	Sphenodon_punctatus
ENSOPRG00000006801	-	56	100.000	ENSSSCG00000011117	-	82	100.000	Sus_scrofa
ENSOPRG00000006801	-	78	98.592	ENSTGUG00000002163	-	82	98.592	Taeniopygia_guttata
ENSOPRG00000006801	-	73	93.662	ENSTRUG00000007519	UPF2	72	93.662	Takifugu_rubripes
ENSOPRG00000006801	-	81	93.662	ENSTNIG00000004453	UPF2	75	93.662	Tetraodon_nigroviridis
ENSOPRG00000006801	-	75	96.937	ENSTBEG00000012679	UPF2	75	96.937	Tupaia_belangeri
ENSOPRG00000006801	-	82	100.000	ENSTTRG00000016388	UPF2	82	100.000	Tursiops_truncatus
ENSOPRG00000006801	-	76	100.000	ENSUAMG00000023560	UPF2	81	100.000	Ursus_americanus
ENSOPRG00000006801	-	82	100.000	ENSUMAG00000012953	UPF2	78	100.000	Ursus_maritimus
ENSOPRG00000006801	-	62	100.000	ENSVPAG00000006763	UPF2	62	100.000	Vicugna_pacos
ENSOPRG00000006801	-	82	100.000	ENSVVUG00000006166	UPF2	82	100.000	Vulpes_vulpes
ENSOPRG00000006801	-	78	97.887	ENSXETG00000033103	UPF2	77	97.887	Xenopus_tropicalis
ENSOPRG00000006801	-	73	92.254	ENSXCOG00000011604	UPF2	72	92.254	Xiphophorus_couchianus
ENSOPRG00000006801	-	73	92.254	ENSXMAG00000017209	UPF2	72	92.254	Xiphophorus_maculatus