EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000007016 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 55929 bases
Position: chrGeneScaffold_2583:8292-64220
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000006435	RRM_1	PF00076.22	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000007028	SCAF4-201	3384	-	ENSOPRP00000006435	1128 (aa)	-	UPI00017769F2

Gene Model

Click here to download ENSOPRG00000007016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000007016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000007016	SCAF4	77	90.217	ENSG00000156304	SCAF4	78	90.761	Homo_sapiens
ENSOPRG00000007016	SCAF4	79	77.197	ENSAPLG00000002509	SCAF4	84	65.244	Anas_platyrhynchos
ENSOPRG00000007016	SCAF4	78	68.677	ENSACAG00000002569	SCAF4	73	68.790	Anolis_carolinensis
ENSOPRG00000007016	SCAF4	77	89.130	ENSANAG00000037494	SCAF4	85	89.130	Aotus_nancymaae
ENSOPRG00000007016	SCAF4	77	89.674	ENSBTAG00000018855	SCAF4	79	90.217	Bos_taurus
ENSOPRG00000007016	SCAF4	77	89.130	ENSCJAG00000008993	SCAF4	83	92.784	Callithrix_jacchus
ENSOPRG00000007016	SCAF4	77	89.674	ENSCAFG00000008863	SCAF4	79	90.217	Canis_familiaris
ENSOPRG00000007016	SCAF4	75	89.674	ENSCAFG00020026019	SCAF4	78	96.774	Canis_lupus_dingo
ENSOPRG00000007016	SCAF4	77	90.217	ENSCHIG00000008385	SCAF4	78	90.761	Capra_hircus
ENSOPRG00000007016	SCAF4	74	93.836	ENSTSYG00000011344	SCAF4	88	95.588	Carlito_syrichta
ENSOPRG00000007016	SCAF4	77	90.217	ENSCPOG00000012443	SCAF4	79	90.761	Cavia_porcellus
ENSOPRG00000007016	SCAF4	77	89.130	ENSCCAG00000033727	SCAF4	83	94.410	Cebus_capucinus
ENSOPRG00000007016	SCAF4	77	90.217	ENSCATG00000030379	SCAF4	82	95.652	Cercocebus_atys
ENSOPRG00000007016	SCAF4	77	90.217	ENSCLAG00000006298	SCAF4	79	90.761	Chinchilla_lanigera
ENSOPRG00000007016	SCAF4	77	90.217	ENSCSAG00000009438	SCAF4	82	95.652	Chlorocebus_sabaeus
ENSOPRG00000007016	SCAF4	77	90.217	ENSCANG00000029847	SCAF4	78	90.761	Colobus_angolensis_palliatus
ENSOPRG00000007016	SCAF4	72	93.789	ENSCGRG00001020821	Scaf4	75	93.789	Cricetulus_griseus_chok1gshd
ENSOPRG00000007016	SCAF4	71	93.789	ENSCGRG00000014360	Scaf4	68	93.789	Cricetulus_griseus_crigri
ENSOPRG00000007016	SCAF4	78	89.674	ENSDNOG00000019014	SCAF4	80	89.674	Dasypus_novemcinctus
ENSOPRG00000007016	SCAF4	66	98.592	ENSETEG00000000583	SCAF4	68	98.592	Echinops_telfairi
ENSOPRG00000007016	SCAF4	77	89.674	ENSEASG00005007756	SCAF4	78	89.674	Equus_asinus_asinus
ENSOPRG00000007016	SCAF4	77	89.674	ENSECAG00000014248	SCAF4	78	89.674	Equus_caballus
ENSOPRG00000007016	SCAF4	77	89.674	ENSFCAG00000002228	SCAF4	79	89.674	Felis_catus
ENSOPRG00000007016	SCAF4	77	90.761	ENSFDAG00000017780	SCAF4	79	90.761	Fukomys_damarensis
ENSOPRG00000007016	SCAF4	79	75.943	ENSGALG00000033965	SCAF4	84	75.000	Gallus_gallus
ENSOPRG00000007016	SCAF4	73	87.294	ENSGGOG00000015557	SCAF4	88	79.646	Gorilla_gorilla
ENSOPRG00000007016	SCAF4	77	90.761	ENSHGLG00000010582	SCAF4	79	92.391	Heterocephalus_glaber_female
ENSOPRG00000007016	SCAF4	77	90.761	ENSHGLG00100009441	SCAF4	80	91.304	Heterocephalus_glaber_male
ENSOPRG00000007016	SCAF4	77	89.674	ENSSTOG00000004450	SCAF4	78	90.217	Ictidomys_tridecemlineatus
ENSOPRG00000007016	SCAF4	77	89.130	ENSJJAG00000019447	Scaf4	85	87.755	Jaculus_jaculus
ENSOPRG00000007016	SCAF4	79	59.716	ENSLACG00000013913	SCAF4	77	62.201	Latimeria_chalumnae
ENSOPRG00000007016	SCAF4	70	56.751	ENSLOCG00000009162	scaf4a	66	55.442	Lepisosteus_oculatus
ENSOPRG00000007016	SCAF4	76	95.031	ENSLAFG00000010710	SCAF4	84	95.031	Loxodonta_africana
ENSOPRG00000007016	SCAF4	77	90.217	ENSMFAG00000037668	SCAF4	94	88.000	Macaca_fascicularis
ENSOPRG00000007016	SCAF4	77	90.217	ENSMMUG00000001712	SCAF4	94	90.769	Macaca_mulatta
ENSOPRG00000007016	SCAF4	77	90.217	ENSMNEG00000032966	SCAF4	82	95.652	Macaca_nemestrina
ENSOPRG00000007016	SCAF4	77	90.217	ENSMLEG00000039674	SCAF4	85	90.761	Mandrillus_leucophaeus
ENSOPRG00000007016	SCAF4	79	76.179	ENSMGAG00000014515	SCAF4	84	73.780	Meleagris_gallopavo
ENSOPRG00000007016	SCAF4	78	88.718	ENSMAUG00000013307	Scaf4	88	89.655	Mesocricetus_auratus
ENSOPRG00000007016	SCAF4	77	90.217	ENSMICG00000005256	SCAF4	85	90.217	Microcebus_murinus
ENSOPRG00000007016	SCAF4	77	89.130	ENSMOCG00000012087	Scaf4	78	89.130	Microtus_ochrogaster
ENSOPRG00000007016	SCAF4	75	91.503	ENSMODG00000021040	SCAF4	84	90.683	Monodelphis_domestica
ENSOPRG00000007016	SCAF4	76	91.848	MGP_CAROLIEiJ_G0020944	Scaf4	74	89.130	Mus_caroli
ENSOPRG00000007016	SCAF4	76	88.043	ENSMUSG00000022983	Scaf4	74	88.587	Mus_musculus
ENSOPRG00000007016	SCAF4	77	88.587	MGP_PahariEiJ_G0016649	Scaf4	74	88.587	Mus_pahari
ENSOPRG00000007016	SCAF4	77	88.043	MGP_SPRETEiJ_G0021850	Scaf4	74	88.043	Mus_spretus
ENSOPRG00000007016	SCAF4	77	89.674	ENSMPUG00000001078	SCAF4	78	90.217	Mustela_putorius_furo
ENSOPRG00000007016	SCAF4	85	69.444	ENSMLUG00000011472	SCAF4	75	89.706	Myotis_lucifugus
ENSOPRG00000007016	SCAF4	77	90.761	ENSNGAG00000005214	Scaf4	85	90.761	Nannospalax_galili
ENSOPRG00000007016	SCAF4	77	90.217	ENSNLEG00000003569	SCAF4	78	90.761	Nomascus_leucogenys
ENSOPRG00000007016	SCAF4	77	88.587	ENSODEG00000002718	SCAF4	76	94.375	Octodon_degus
ENSOPRG00000007016	SCAF4	77	88.208	ENSOCUG00000008336	SCAF4	85	79.310	Oryctolagus_cuniculus
ENSOPRG00000007016	SCAF4	75	95.031	ENSOGAG00000014653	SCAF4	72	95.031	Otolemur_garnettii
ENSOPRG00000007016	SCAF4	77	90.217	ENSOARG00000013894	SCAF4	78	90.761	Ovis_aries
ENSOPRG00000007016	SCAF4	77	90.217	ENSPPAG00000028535	SCAF4	84	90.217	Pan_paniscus
ENSOPRG00000007016	SCAF4	77	89.130	ENSPPRG00000000635	SCAF4	79	89.130	Panthera_pardus
ENSOPRG00000007016	SCAF4	85	83.255	ENSPTIG00000021578	SCAF4	85	78.448	Panthera_tigris_altaica
ENSOPRG00000007016	SCAF4	77	90.217	ENSPTRG00000013848	SCAF4	84	90.217	Pan_troglodytes
ENSOPRG00000007016	SCAF4	85	90.769	ENSPANG00000017332	SCAF4	82	90.769	Papio_anubis
ENSOPRG00000007016	SCAF4	78	76.179	ENSPSIG00000014242	SCAF4	82	74.691	Pelodiscus_sinensis
ENSOPRG00000007016	SCAF4	75	85.714	ENSPCIG00000028183	SCAF4	80	73.770	Phascolarctos_cinereus
ENSOPRG00000007016	SCAF4	77	90.217	ENSPPYG00000011355	SCAF4	79	90.761	Pongo_abelii
ENSOPRG00000007016	SCAF4	77	86.740	ENSPCAG00000009998	SCAF4	64	93.333	Procavia_capensis
ENSOPRG00000007016	SCAF4	77	89.130	ENSPCOG00000018710	SCAF4	84	95.139	Propithecus_coquereli
ENSOPRG00000007016	SCAF4	77	89.130	ENSPVAG00000005220	SCAF4	83	94.410	Pteropus_vampyrus
ENSOPRG00000007016	SCAF4	75	84.973	ENSRNOG00000002104	Scaf4	66	95.359	Rattus_norvegicus
ENSOPRG00000007016	SCAF4	77	90.217	ENSRBIG00000040007	SCAF4	76	95.652	Rhinopithecus_bieti
ENSOPRG00000007016	SCAF4	77	90.217	ENSRROG00000029488	SCAF4	83	95.652	Rhinopithecus_roxellana
ENSOPRG00000007016	SCAF4	77	88.636	ENSSHAG00000001581	SCAF4	86	85.326	Sarcophilus_harrisii
ENSOPRG00000007016	SCAF4	77	87.500	ENSSARG00000009994	SCAF4	88	86.000	Sorex_araneus
ENSOPRG00000007016	SCAF4	77	85.349	ENSSSCG00000021023	SCAF4	85	78.142	Sus_scrofa
ENSOPRG00000007016	SCAF4	79	79.545	ENSTGUG00000013464	SCAF4	85	75.477	Taeniopygia_guttata
ENSOPRG00000007016	SCAF4	75	90.683	ENSTTRG00000010963	SCAF4	84	90.683	Tursiops_truncatus
ENSOPRG00000007016	SCAF4	77	85.377	ENSUAMG00000008860	SCAF4	84	82.500	Ursus_americanus
ENSOPRG00000007016	SCAF4	77	89.674	ENSUMAG00000016962	SCAF4	85	95.031	Ursus_maritimus
ENSOPRG00000007016	SCAF4	77	89.674	ENSVVUG00000002953	SCAF4	79	89.674	Vulpes_vulpes
ENSOPRG00000007016	SCAF4	71	62.366	ENSXETG00000007351	scaf4	73	57.263	Xenopus_tropicalis