EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000007290 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 31505 bases
Position: chrGeneScaffold_2001:275585-307089
Accession: 101521066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000006674	MRP-S27	PF10037.9	6.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000007286	PTCD2-201	1167	XM_004586157	ENSOPRP00000006674	388 (aa)	XP_004586214	UPI00017789D5

Gene Model

Click here to download ENSOPRG00000007290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000007290's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000007290	PTCD2	99	74.160	ENSG00000049883	PTCD2	100	74.384	Homo_sapiens
ENSOPRG00000007290	PTCD2	90	47.126	ENSAPOG00000020682	ptcd2	91	47.126	Acanthochromis_polyacanthus
ENSOPRG00000007290	PTCD2	99	71.576	ENSAMEG00000007194	PTCD2	99	71.576	Ailuropoda_melanoleuca
ENSOPRG00000007290	PTCD2	89	40.974	ENSACIG00000002053	ptcd2	100	40.974	Amphilophus_citrinellus
ENSOPRG00000007290	PTCD2	90	45.977	ENSAOCG00000006616	ptcd2	89	45.977	Amphiprion_ocellaris
ENSOPRG00000007290	PTCD2	90	45.977	ENSAPEG00000022926	ptcd2	89	45.977	Amphiprion_percula
ENSOPRG00000007290	PTCD2	98	55.263	ENSACAG00000009747	PTCD2	94	55.263	Anolis_carolinensis
ENSOPRG00000007290	PTCD2	99	73.902	ENSANAG00000029353	PTCD2	99	73.902	Aotus_nancymaae
ENSOPRG00000007290	PTCD2	90	45.690	ENSACLG00000027742	ptcd2	89	45.690	Astatotilapia_calliptera
ENSOPRG00000007290	PTCD2	90	42.980	ENSAMXG00000029404	ptcd2	92	42.980	Astyanax_mexicanus
ENSOPRG00000007290	PTCD2	97	72.149	ENSBTAG00000014675	PTCD2	98	72.149	Bos_taurus
ENSOPRG00000007290	PTCD2	99	73.127	ENSCJAG00000016364	PTCD2	99	73.127	Callithrix_jacchus
ENSOPRG00000007290	PTCD2	100	71.907	ENSCAFG00000007982	PTCD2	91	71.907	Canis_familiaris
ENSOPRG00000007290	PTCD2	89	73.121	ENSCAFG00020019147	PTCD2	97	73.121	Canis_lupus_dingo
ENSOPRG00000007290	PTCD2	99	72.656	ENSCHIG00000017118	PTCD2	100	72.656	Capra_hircus
ENSOPRG00000007290	PTCD2	99	68.146	ENSCPOG00000040168	PTCD2	100	68.146	Cavia_porcellus
ENSOPRG00000007290	PTCD2	82	66.144	ENSCCAG00000021996	-	98	66.144	Cebus_capucinus
ENSOPRG00000007290	PTCD2	99	72.610	ENSCCAG00000029389	-	99	72.610	Cebus_capucinus
ENSOPRG00000007290	PTCD2	99	73.107	ENSCATG00000019069	PTCD2	100	73.107	Cercocebus_atys
ENSOPRG00000007290	PTCD2	99	68.407	ENSCLAG00000000072	PTCD2	100	68.407	Chinchilla_lanigera
ENSOPRG00000007290	PTCD2	99	73.629	ENSCSAG00000015623	PTCD2	100	73.629	Chlorocebus_sabaeus
ENSOPRG00000007290	PTCD2	73	73.529	ENSCHOG00000010634	PTCD2	82	73.529	Choloepus_hoffmanni
ENSOPRG00000007290	PTCD2	100	53.846	ENSCPBG00000000216	PTCD2	99	53.846	Chrysemys_picta_bellii
ENSOPRG00000007290	PTCD2	99	73.127	ENSCANG00000035636	PTCD2	99	73.127	Colobus_angolensis_palliatus
ENSOPRG00000007290	PTCD2	99	68.992	ENSCGRG00001015289	Ptcd2	84	68.992	Cricetulus_griseus_chok1gshd
ENSOPRG00000007290	PTCD2	99	68.992	ENSCGRG00000006193	Ptcd2	84	68.992	Cricetulus_griseus_crigri
ENSOPRG00000007290	PTCD2	90	45.402	ENSCVAG00000001285	ptcd2	89	45.402	Cyprinodon_variegatus
ENSOPRG00000007290	PTCD2	91	46.218	ENSDARG00000035391	ptcd2	93	46.218	Danio_rerio
ENSOPRG00000007290	PTCD2	99	70.757	ENSDNOG00000008719	PTCD2	100	70.757	Dasypus_novemcinctus
ENSOPRG00000007290	PTCD2	99	73.127	ENSDORG00000004921	Ptcd2	100	73.127	Dipodomys_ordii
ENSOPRG00000007290	PTCD2	99	63.144	ENSETEG00000016542	PTCD2	99	63.144	Echinops_telfairi
ENSOPRG00000007290	PTCD2	99	74.151	ENSEASG00005018038	PTCD2	100	74.151	Equus_asinus_asinus
ENSOPRG00000007290	PTCD2	99	73.629	ENSECAG00000007022	PTCD2	98	73.629	Equus_caballus
ENSOPRG00000007290	PTCD2	99	65.013	ENSEEUG00000014031	PTCD2	99	65.013	Erinaceus_europaeus
ENSOPRG00000007290	PTCD2	91	50.000	ENSELUG00000003584	ptcd2	92	50.000	Esox_lucius
ENSOPRG00000007290	PTCD2	99	67.442	ENSFCAG00000045432	PTCD2	83	67.442	Felis_catus
ENSOPRG00000007290	PTCD2	84	51.070	ENSFALG00000010299	PTCD2	99	51.070	Ficedula_albicollis
ENSOPRG00000007290	PTCD2	99	68.930	ENSFDAG00000018461	PTCD2	100	68.930	Fukomys_damarensis
ENSOPRG00000007290	PTCD2	90	50.427	ENSGMOG00000003637	ptcd2	91	50.427	Gadus_morhua
ENSOPRG00000007290	PTCD2	91	48.305	ENSGALG00000038260	PTCD2	93	48.305	Gallus_gallus
ENSOPRG00000007290	PTCD2	100	55.754	ENSGAGG00000021952	PTCD2	99	55.754	Gopherus_agassizii
ENSOPRG00000007290	PTCD2	99	74.419	ENSGGOG00000010695	PTCD2	99	74.419	Gorilla_gorilla
ENSOPRG00000007290	PTCD2	90	45.977	ENSHBUG00000009191	ptcd2	89	45.977	Haplochromis_burtoni
ENSOPRG00000007290	PTCD2	99	69.452	ENSHGLG00000001234	PTCD2	100	69.452	Heterocephalus_glaber_female
ENSOPRG00000007290	PTCD2	99	69.452	ENSHGLG00100015419	PTCD2	100	69.452	Heterocephalus_glaber_male
ENSOPRG00000007290	PTCD2	95	45.699	ENSHCOG00000001703	ptcd2	95	45.699	Hippocampus_comes
ENSOPRG00000007290	PTCD2	84	44.648	ENSIPUG00000006080	ptcd2	91	43.840	Ictalurus_punctatus
ENSOPRG00000007290	PTCD2	98	71.916	ENSSTOG00000006596	PTCD2	99	71.916	Ictidomys_tridecemlineatus
ENSOPRG00000007290	PTCD2	99	70.235	ENSJJAG00000024388	Ptcd2	100	70.235	Jaculus_jaculus
ENSOPRG00000007290	PTCD2	88	41.399	ENSKMAG00000009329	ptcd2	90	41.399	Kryptolebias_marmoratus
ENSOPRG00000007290	PTCD2	89	46.821	ENSLBEG00000024871	ptcd2	88	46.821	Labrus_bergylta
ENSOPRG00000007290	PTCD2	91	54.494	ENSLOCG00000011122	ptcd2	93	54.494	Lepisosteus_oculatus
ENSOPRG00000007290	PTCD2	80	72.990	ENSLAFG00000004115	PTCD2	100	72.990	Loxodonta_africana
ENSOPRG00000007290	PTCD2	99	72.798	ENSMFAG00000031516	PTCD2	99	72.798	Macaca_fascicularis
ENSOPRG00000007290	PTCD2	99	72.585	ENSMNEG00000007537	PTCD2	100	72.585	Macaca_nemestrina
ENSOPRG00000007290	PTCD2	99	73.316	ENSMLEG00000031093	PTCD2	99	73.316	Mandrillus_leucophaeus
ENSOPRG00000007290	PTCD2	94	47.945	ENSMAMG00000018529	ptcd2	94	47.945	Mastacembelus_armatus
ENSOPRG00000007290	PTCD2	90	45.690	ENSMZEG00005003625	ptcd2	89	45.690	Maylandia_zebra
ENSOPRG00000007290	PTCD2	90	48.851	ENSMGAG00000005033	PTCD2	100	48.851	Meleagris_gallopavo
ENSOPRG00000007290	PTCD2	99	54.569	ENSMAUG00000020253	Ptcd2	100	54.569	Mesocricetus_auratus
ENSOPRG00000007290	PTCD2	99	74.151	ENSMICG00000004535	PTCD2	99	74.151	Microcebus_murinus
ENSOPRG00000007290	PTCD2	99	70.496	ENSMOCG00000019985	Ptcd2	100	70.496	Microtus_ochrogaster
ENSOPRG00000007290	PTCD2	97	53.989	ENSMODG00000001695	PTCD2	96	53.989	Monodelphis_domestica
ENSOPRG00000007290	PTCD2	90	48.563	ENSMALG00000022372	ptcd2	91	48.563	Monopterus_albus
ENSOPRG00000007290	PTCD2	99	70.496	MGP_CAROLIEiJ_G0018829	Ptcd2	100	70.496	Mus_caroli
ENSOPRG00000007290	PTCD2	99	70.757	ENSMUSG00000021650	Ptcd2	100	70.757	Mus_musculus
ENSOPRG00000007290	PTCD2	99	72.063	MGP_PahariEiJ_G0015904	Ptcd2	100	72.063	Mus_pahari
ENSOPRG00000007290	PTCD2	99	71.279	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.279	Mus_spretus
ENSOPRG00000007290	PTCD2	99	73.107	ENSMPUG00000014401	PTCD2	100	73.107	Mustela_putorius_furo
ENSOPRG00000007290	PTCD2	99	75.194	ENSMLUG00000007374	PTCD2	99	75.194	Myotis_lucifugus
ENSOPRG00000007290	PTCD2	99	68.930	ENSNGAG00000005027	Ptcd2	100	68.930	Nannospalax_galili
ENSOPRG00000007290	PTCD2	85	44.545	ENSNBRG00000000092	-	100	44.545	Neolamprologus_brichardi
ENSOPRG00000007290	PTCD2	90	45.690	ENSNBRG00000008174	ptcd2	91	45.690	Neolamprologus_brichardi
ENSOPRG00000007290	PTCD2	99	73.902	ENSNLEG00000004516	PTCD2	99	73.902	Nomascus_leucogenys
ENSOPRG00000007290	PTCD2	81	48.243	ENSMEUG00000014012	-	82	48.243	Notamacropus_eugenii
ENSOPRG00000007290	PTCD2	99	71.540	ENSODEG00000016417	PTCD2	100	71.540	Octodon_degus
ENSOPRG00000007290	PTCD2	77	46.309	ENSONIG00000011269	ptcd2	87	46.309	Oreochromis_niloticus
ENSOPRG00000007290	PTCD2	99	79.112	ENSOCUG00000007970	PTCD2	100	79.112	Oryctolagus_cuniculus
ENSOPRG00000007290	PTCD2	89	45.954	ENSORLG00000003851	ptcd2	88	46.110	Oryzias_latipes
ENSOPRG00000007290	PTCD2	89	45.376	ENSORLG00020009823	ptcd2	90	45.533	Oryzias_latipes_hni
ENSOPRG00000007290	PTCD2	90	45.143	ENSORLG00015016777	ptcd2	99	45.299	Oryzias_latipes_hsok
ENSOPRG00000007290	PTCD2	89	43.642	ENSOMEG00000012396	ptcd2	84	43.642	Oryzias_melastigma
ENSOPRG00000007290	PTCD2	99	70.026	ENSOGAG00000008390	PTCD2	99	70.026	Otolemur_garnettii
ENSOPRG00000007290	PTCD2	99	72.680	ENSOARG00000005087	PTCD2	99	72.680	Ovis_aries
ENSOPRG00000007290	PTCD2	99	74.419	ENSPPAG00000028480	PTCD2	99	74.419	Pan_paniscus
ENSOPRG00000007290	PTCD2	99	74.677	ENSPTRG00000016968	PTCD2	99	74.677	Pan_troglodytes
ENSOPRG00000007290	PTCD2	89	74.783	ENSPANG00000006611	PTCD2	89	74.783	Papio_anubis
ENSOPRG00000007290	PTCD2	91	49.444	ENSPKIG00000019896	ptcd2	93	49.444	Paramormyrops_kingsleyae
ENSOPRG00000007290	PTCD2	81	59.177	ENSPSIG00000014559	PTCD2	98	59.177	Pelodiscus_sinensis
ENSOPRG00000007290	PTCD2	99	69.351	ENSPEMG00000000884	Ptcd2	100	69.351	Peromyscus_maniculatus_bairdii
ENSOPRG00000007290	PTCD2	99	54.688	ENSPCIG00000029047	PTCD2	100	54.688	Phascolarctos_cinereus
ENSOPRG00000007290	PTCD2	90	45.977	ENSPLAG00000010456	ptcd2	91	45.977	Poecilia_latipinna
ENSOPRG00000007290	PTCD2	90	45.690	ENSPREG00000021797	ptcd2	88	45.690	Poecilia_reticulata
ENSOPRG00000007290	PTCD2	99	64.249	ENSPPYG00000015543	PTCD2	99	64.249	Pongo_abelii
ENSOPRG00000007290	PTCD2	81	61.587	ENSPCAG00000006806	PTCD2	99	61.587	Procavia_capensis
ENSOPRG00000007290	PTCD2	99	69.509	ENSPVAG00000010935	PTCD2	99	69.509	Pteropus_vampyrus
ENSOPRG00000007290	PTCD2	90	45.690	ENSPNYG00000003122	ptcd2	89	45.690	Pundamilia_nyererei
ENSOPRG00000007290	PTCD2	91	47.765	ENSPNAG00000021490	ptcd2	93	48.603	Pygocentrus_nattereri
ENSOPRG00000007290	PTCD2	99	71.018	ENSRNOG00000028403	Ptcd2	100	71.018	Rattus_norvegicus
ENSOPRG00000007290	PTCD2	99	68.992	ENSRBIG00000032929	PTCD2	99	68.992	Rhinopithecus_bieti
ENSOPRG00000007290	PTCD2	99	74.413	ENSRROG00000000080	PTCD2	100	74.413	Rhinopithecus_roxellana
ENSOPRG00000007290	PTCD2	99	72.846	ENSSBOG00000018911	PTCD2	100	72.846	Saimiri_boliviensis_boliviensis
ENSOPRG00000007290	PTCD2	99	55.065	ENSSHAG00000003833	PTCD2	99	55.065	Sarcophilus_harrisii
ENSOPRG00000007290	PTCD2	90	47.429	ENSSFOG00015015415	ptcd2	91	47.429	Scleropages_formosus
ENSOPRG00000007290	PTCD2	89	42.939	ENSSMAG00000010350	ptcd2	90	42.939	Scophthalmus_maximus
ENSOPRG00000007290	PTCD2	89	47.262	ENSSDUG00000008142	ptcd2	87	47.262	Seriola_dumerili
ENSOPRG00000007290	PTCD2	89	47.550	ENSSLDG00000015284	ptcd2	91	47.550	Seriola_lalandi_dorsalis
ENSOPRG00000007290	PTCD2	81	64.537	ENSSARG00000004983	PTCD2	100	64.537	Sorex_araneus
ENSOPRG00000007290	PTCD2	98	49.351	ENSSPUG00000000176	PTCD2	96	49.351	Sphenodon_punctatus
ENSOPRG00000007290	PTCD2	90	46.552	ENSSPAG00000008591	ptcd2	89	46.552	Stegastes_partitus
ENSOPRG00000007290	PTCD2	99	73.385	ENSSSCG00000016975	PTCD2	91	73.385	Sus_scrofa
ENSOPRG00000007290	PTCD2	89	49.275	ENSTGUG00000005705	PTCD2	99	49.275	Taeniopygia_guttata
ENSOPRG00000007290	PTCD2	99	72.093	ENSTBEG00000016559	PTCD2	99	72.093	Tupaia_belangeri
ENSOPRG00000007290	PTCD2	99	73.779	ENSTTRG00000011851	PTCD2	99	73.779	Tursiops_truncatus
ENSOPRG00000007290	PTCD2	99	71.576	ENSUAMG00000007583	PTCD2	91	71.576	Ursus_americanus
ENSOPRG00000007290	PTCD2	99	71.540	ENSUMAG00000007666	PTCD2	100	71.540	Ursus_maritimus
ENSOPRG00000007290	PTCD2	99	72.165	ENSVPAG00000009597	PTCD2	99	72.165	Vicugna_pacos
ENSOPRG00000007290	PTCD2	99	72.324	ENSVVUG00000007299	-	100	72.324	Vulpes_vulpes
ENSOPRG00000007290	PTCD2	96	49.868	ENSXETG00000031652	PTCD2	99	49.868	Xenopus_tropicalis
ENSOPRG00000007290	PTCD2	83	47.516	ENSXMAG00000005940	ptcd2	82	45.977	Xiphophorus_maculatus