EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000007399 (Gene tree)
Gene ID: -
Gene Symbol: ZSCAN22
Alias: HKR2|ZNF50
Full Name: zinc finger and SCAN domain containing 22
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 3701 bases
Position: chrGeneScaffold_5366:163881-167581
Accession: 4929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000006772	zf-C2H2	PF00096.26	4.2e-46	1	7
ENSOPRP00000006772	zf-C2H2	PF00096.26	4.2e-46	2	7
ENSOPRP00000006772	zf-C2H2	PF00096.26	4.2e-46	3	7
ENSOPRP00000006772	zf-C2H2	PF00096.26	4.2e-46	4	7
ENSOPRP00000006772	zf-C2H2	PF00096.26	4.2e-46	5	7
ENSOPRP00000006772	zf-C2H2	PF00096.26	4.2e-46	6	7
ENSOPRP00000006772	zf-C2H2	PF00096.26	4.2e-46	7	7
ENSOPRP00000006772	zf-met	PF12874.7	7.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000007393	ZSCAN22-201	1452	-	ENSOPRP00000006772	483 (aa)	-	UPI0001776B7F

Gene Model

Click here to download ENSOPRG00000007399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000007399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000007399	ZSCAN22	57	38.621	ENSOPRG00000010673	ZNF319	94	38.621
ENSOPRG00000007399	ZSCAN22	51	36.788	ENSOPRG00000011066	-	50	36.788
ENSOPRG00000007399	ZSCAN22	55	46.309	ENSOPRG00000001473	GFI1	53	46.309
ENSOPRG00000007399	ZSCAN22	60	31.282	ENSOPRG00000004408	ZFAT	52	31.313
ENSOPRG00000007399	ZSCAN22	60	48.718	ENSOPRG00000014061	ZNF317	89	48.718
ENSOPRG00000007399	ZSCAN22	56	50.685	ENSOPRG00000003198	ZNF81	79	50.685
ENSOPRG00000007399	ZSCAN22	51	45.122	ENSOPRG00000012709	ZNF236	63	45.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000007399	ZSCAN22	100	71.138	ENSFCAG00000021958	ZSCAN22	99	71.138	Felis_catus
ENSOPRG00000007399	ZSCAN22	100	74.593	ENSOCUG00000022361	ZSCAN22	90	74.593	Oryctolagus_cuniculus
ENSOPRG00000007399	ZSCAN22	100	71.545	ENSPPRG00000003132	ZSCAN22	99	71.545	Panthera_pardus
ENSOPRG00000007399	ZSCAN22	100	71.341	ENSPTIG00000019806	ZSCAN22	99	71.341	Panthera_tigris_altaica
ENSOPRG00000007399	ZSCAN22	100	71.138	ENSUAMG00000019481	-	99	71.138	Ursus_americanus
ENSOPRG00000007399	ZSCAN22	70	72.107	ENSUAMG00000004882	-	99	72.107	Ursus_americanus
ENSOPRG00000007399	ZSCAN22	100	71.138	ENSUMAG00000003953	ZSCAN22	99	71.138	Ursus_maritimus