EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000007560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 6273 bases
Position: chrGeneScaffold_762:217411-223683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000006913	RRM_1	PF00076.22	2.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000007551	-	336	-	ENSOPRP00000006913	111 (aa)	-	UPI0001778008

Gene Model

Click here to download ENSOPRG00000007560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000007560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000007560	-	84	35.385	ENSOPRG00000002546	HNRNPAB	60	35.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000007560	-	90	80.000	ENSBTAG00000008135	SLIRP	100	78.378	Bos_taurus
ENSOPRG00000007560	-	92	70.588	ENSBTAG00000050457	-	100	70.588	Bos_taurus
ENSOPRG00000007560	-	88	79.592	ENSCAFG00000017230	SLIRP	98	77.982	Canis_familiaris
ENSOPRG00000007560	-	88	79.592	ENSCAFG00020000852	-	98	77.982	Canis_lupus_dingo
ENSOPRG00000007560	-	100	79.279	ENSCHIG00000019077	-	100	79.279	Capra_hircus
ENSOPRG00000007560	-	100	77.477	ENSCHIG00000002964	-	100	77.477	Capra_hircus
ENSOPRG00000007560	-	100	73.874	ENSCPOG00000001500	-	100	73.874	Cavia_porcellus
ENSOPRG00000007560	-	100	72.072	ENSCLAG00000008545	-	100	72.072	Chinchilla_lanigera
ENSOPRG00000007560	-	90	55.000	ENSDNOG00000041397	-	90	55.000	Dasypus_novemcinctus
ENSOPRG00000007560	-	100	82.883	ENSECAG00000000712	SLIRP	100	82.883	Equus_caballus
ENSOPRG00000007560	-	89	78.788	ENSJJAG00000018723	-	100	77.477	Jaculus_jaculus
ENSOPRG00000007560	-	100	77.477	MGP_PahariEiJ_G0029754	-	100	77.477	Mus_pahari
ENSOPRG00000007560	-	90	79.000	ENSMLUG00000022403	-	100	77.477	Myotis_lucifugus
ENSOPRG00000007560	-	100	86.486	ENSOCUG00000009713	-	100	86.486	Oryctolagus_cuniculus
ENSOPRG00000007560	-	88	72.449	ENSOGAG00000027580	-	97	69.725	Otolemur_garnettii
ENSOPRG00000007560	-	90	80.000	ENSOARG00000002642	SLIRP	100	78.378	Ovis_aries
ENSOPRG00000007560	-	100	65.766	ENSOARG00000016139	-	100	65.766	Ovis_aries
ENSOPRG00000007560	-	86	64.583	ENSPCAG00000004290	-	100	63.063	Procavia_capensis
ENSOPRG00000007560	-	69	75.325	ENSPVAG00000006420	-	69	75.325	Pteropus_vampyrus
ENSOPRG00000007560	-	100	76.577	ENSRNOG00000012314	Slirp	100	76.577	Rattus_norvegicus
ENSOPRG00000007560	-	100	81.081	ENSTBEG00000013979	-	100	81.081	Tupaia_belangeri
ENSOPRG00000007560	-	69	83.117	ENSTTRG00000009328	-	100	66.667	Tursiops_truncatus