EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000007647 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 9446 bases
Position: chrGeneScaffold_3787:337754-347199
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000007008	MBD	PF01429.19	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000007656	MBD1-201	1794	-	ENSOPRP00000007008	597 (aa)	-	UPI0001777C55

Gene Model

Click here to download ENSOPRG00000007647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000007647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000007647	MBD1	100	74.876	ENSG00000141644	MBD1	99	84.416	Homo_sapiens
ENSOPRG00000007647	MBD1	100	70.253	ENSAMEG00000000238	MBD1	96	70.253	Ailuropoda_melanoleuca
ENSOPRG00000007647	MBD1	70	30.804	ENSATEG00000009608	mbd1b	52	30.909	Anabas_testudineus
ENSOPRG00000007647	MBD1	63	43.873	ENSACAG00000006091	-	100	43.812	Anolis_carolinensis
ENSOPRG00000007647	MBD1	98	74.155	ENSANAG00000036253	MBD1	100	71.746	Aotus_nancymaae
ENSOPRG00000007647	MBD1	100	72.607	ENSBTAG00000003801	MBD1	100	72.607	Bos_taurus
ENSOPRG00000007647	MBD1	98	74.155	ENSCJAG00000004959	MBD1	100	70.405	Callithrix_jacchus
ENSOPRG00000007647	MBD1	100	70.365	ENSCAFG00000018928	MBD1	96	70.365	Canis_familiaris
ENSOPRG00000007647	MBD1	99	69.502	ENSCAFG00020024272	MBD1	97	69.502	Canis_lupus_dingo
ENSOPRG00000007647	MBD1	100	72.442	ENSCHIG00000021134	MBD1	100	72.442	Capra_hircus
ENSOPRG00000007647	MBD1	98	73.649	ENSTSYG00000000509	MBD1	100	71.111	Carlito_syrichta
ENSOPRG00000007647	MBD1	99	51.852	ENSCAPG00000015782	MBD1	96	51.852	Cavia_aperea
ENSOPRG00000007647	MBD1	100	58.488	ENSCPOG00000001671	MBD1	100	62.305	Cavia_porcellus
ENSOPRG00000007647	MBD1	100	73.582	ENSCCAG00000034600	MBD1	96	69.406	Cebus_capucinus
ENSOPRG00000007647	MBD1	100	75.041	ENSCATG00000029959	MBD1	100	75.041	Cercocebus_atys
ENSOPRG00000007647	MBD1	100	71.429	ENSCLAG00000007457	MBD1	89	71.429	Chinchilla_lanigera
ENSOPRG00000007647	MBD1	100	74.876	ENSCSAG00000018070	MBD1	100	74.876	Chlorocebus_sabaeus
ENSOPRG00000007647	MBD1	100	74.545	ENSCANG00000033425	MBD1	100	74.545	Colobus_angolensis_palliatus
ENSOPRG00000007647	MBD1	100	65.517	ENSCGRG00001014843	Mbd1	100	65.517	Cricetulus_griseus_chok1gshd
ENSOPRG00000007647	MBD1	99	43.930	ENSCGRG00000014135	Mbd1	96	49.416	Cricetulus_griseus_crigri
ENSOPRG00000007647	MBD1	100	66.508	ENSDNOG00000015998	MBD1	100	67.778	Dasypus_novemcinctus
ENSOPRG00000007647	MBD1	90	73.780	ENSDORG00000013917	Mbd1	97	73.780	Dipodomys_ordii
ENSOPRG00000007647	MBD1	100	71.736	ENSEASG00005003857	MBD1	100	71.736	Equus_asinus_asinus
ENSOPRG00000007647	MBD1	100	73.927	ENSECAG00000011497	MBD1	74	83.908	Equus_caballus
ENSOPRG00000007647	MBD1	88	95.745	ENSFCAG00000015730	MBD1	100	70.728	Felis_catus
ENSOPRG00000007647	MBD1	90	73.795	ENSFDAG00000011085	MBD1	96	73.795	Fukomys_damarensis
ENSOPRG00000007647	MBD1	100	74.711	ENSGGOG00000016966	MBD1	100	74.711	Gorilla_gorilla
ENSOPRG00000007647	MBD1	100	74.050	ENSHGLG00000008740	MBD1	100	74.050	Heterocephalus_glaber_female
ENSOPRG00000007647	MBD1	94	78.451	ENSHGLG00100005198	MBD1	100	56.121	Heterocephalus_glaber_male
ENSOPRG00000007647	MBD1	100	72.520	ENSSTOG00000007780	MBD1	100	72.358	Ictidomys_tridecemlineatus
ENSOPRG00000007647	MBD1	98	58.794	ENSJJAG00000022859	Mbd1	96	58.794	Jaculus_jaculus
ENSOPRG00000007647	MBD1	64	39.950	ENSLACG00000002414	-	57	39.651	Latimeria_chalumnae
ENSOPRG00000007647	MBD1	99	62.355	ENSLAFG00000031328	MBD1	97	62.355	Loxodonta_africana
ENSOPRG00000007647	MBD1	100	75.041	ENSMFAG00000026335	MBD1	100	75.041	Macaca_fascicularis
ENSOPRG00000007647	MBD1	100	72.063	ENSMMUG00000009050	MBD1	100	72.063	Macaca_mulatta
ENSOPRG00000007647	MBD1	100	75.041	ENSMNEG00000038822	MBD1	100	75.041	Macaca_nemestrina
ENSOPRG00000007647	MBD1	100	74.876	ENSMLEG00000043121	MBD1	100	74.876	Mandrillus_leucophaeus
ENSOPRG00000007647	MBD1	100	73.496	ENSMICG00000006414	MBD1	100	80.357	Microcebus_murinus
ENSOPRG00000007647	MBD1	64	42.821	ENSMODG00000001286	-	57	42.336	Monodelphis_domestica
ENSOPRG00000007647	MBD1	99	59.236	ENSMUSG00000024561	Mbd1	97	59.236	Mus_musculus
ENSOPRG00000007647	MBD1	100	59.777	MGP_PahariEiJ_G0019128	Mbd1	100	60.095	Mus_pahari
ENSOPRG00000007647	MBD1	98	60.227	MGP_SPRETEiJ_G0023304	Mbd1	99	60.227	Mus_spretus
ENSOPRG00000007647	MBD1	100	70.570	ENSMPUG00000008843	MBD1	96	70.570	Mustela_putorius_furo
ENSOPRG00000007647	MBD1	100	68.889	ENSMLUG00000008286	MBD1	96	68.889	Myotis_lucifugus
ENSOPRG00000007647	MBD1	98	57.426	ENSNGAG00000011412	Mbd1	96	57.591	Nannospalax_galili
ENSOPRG00000007647	MBD1	100	74.050	ENSNLEG00000011661	-	100	74.050	Nomascus_leucogenys
ENSOPRG00000007647	MBD1	98	57.458	ENSNLEG00000032711	-	89	57.458	Nomascus_leucogenys
ENSOPRG00000007647	MBD1	99	59.000	ENSODEG00000018451	MBD1	97	59.000	Octodon_degus
ENSOPRG00000007647	MBD1	84	44.320	ENSOANG00000014593	-	99	45.541	Ornithorhynchus_anatinus
ENSOPRG00000007647	MBD1	100	75.277	ENSOCUG00000006554	MBD1	100	75.594	Oryctolagus_cuniculus
ENSOPRG00000007647	MBD1	100	68.594	ENSOGAG00000003784	MBD1	96	68.125	Otolemur_garnettii
ENSOPRG00000007647	MBD1	100	69.462	ENSOARG00000004218	MBD1	95	69.462	Ovis_aries
ENSOPRG00000007647	MBD1	100	74.711	ENSPPAG00000038886	MBD1	100	74.711	Pan_paniscus
ENSOPRG00000007647	MBD1	88	95.745	ENSPPRG00000021387	MBD1	100	73.806	Panthera_pardus
ENSOPRG00000007647	MBD1	88	95.745	ENSPTIG00000021231	MBD1	100	73.641	Panthera_tigris_altaica
ENSOPRG00000007647	MBD1	100	74.711	ENSPTRG00000010021	MBD1	100	74.711	Pan_troglodytes
ENSOPRG00000007647	MBD1	98	74.324	ENSPANG00000010867	MBD1	100	71.905	Papio_anubis
ENSOPRG00000007647	MBD1	99	51.864	ENSPEMG00000022630	Mbd1	97	51.864	Peromyscus_maniculatus_bairdii
ENSOPRG00000007647	MBD1	83	47.592	ENSPCIG00000027937	-	79	42.739	Phascolarctos_cinereus
ENSOPRG00000007647	MBD1	67	30.404	ENSPMEG00000024145	mbd1b	50	31.190	Poecilia_mexicana
ENSOPRG00000007647	MBD1	100	74.876	ENSPPYG00000009158	MBD1	91	74.876	Pongo_abelii
ENSOPRG00000007647	MBD1	99	63.907	ENSPCAG00000001648	MBD1	99	63.907	Procavia_capensis
ENSOPRG00000007647	MBD1	100	74.587	ENSPCOG00000012450	MBD1	100	80.734	Propithecus_coquereli
ENSOPRG00000007647	MBD1	99	43.902	ENSRNOG00000024104	Mbd1	96	44.553	Rattus_norvegicus
ENSOPRG00000007647	MBD1	100	66.942	ENSRBIG00000041294	MBD1	100	66.942	Rhinopithecus_bieti
ENSOPRG00000007647	MBD1	100	74.545	ENSRROG00000032517	MBD1	100	74.545	Rhinopithecus_roxellana
ENSOPRG00000007647	MBD1	98	74.324	ENSSBOG00000027169	MBD1	97	70.455	Saimiri_boliviensis_boliviensis
ENSOPRG00000007647	MBD1	76	45.238	ENSSHAG00000003661	-	99	45.788	Sarcophilus_harrisii
ENSOPRG00000007647	MBD1	100	72.682	ENSSSCG00000004516	MBD1	100	72.682	Sus_scrofa
ENSOPRG00000007647	MBD1	68	59.884	ENSTBEG00000012651	-	68	59.884	Tupaia_belangeri
ENSOPRG00000007647	MBD1	100	69.852	ENSTTRG00000015523	MBD1	100	69.852	Tursiops_truncatus
ENSOPRG00000007647	MBD1	100	69.752	ENSUAMG00000004752	MBD1	100	69.421	Ursus_americanus
ENSOPRG00000007647	MBD1	100	73.311	ENSUMAG00000002947	MBD1	100	73.311	Ursus_maritimus