EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000007883 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 2971 bases
Position: chrGeneScaffold_4406:377178-380148
Accession: 101516760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000007206	MMR_HSR1	PF01926.23	8.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000007870	RAB5B-201	648	-	ENSOPRP00000007206	215 (aa)	XP_004589706	UPI000000125D

Gene Model

Click here to download ENSOPRG00000007883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000007883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000007883	RAB5B	75	32.515	ENSOPRG00000012068	KRAS	85	32.515
ENSOPRG00000007883	RAB5B	88	40.526	ENSOPRG00000016163	RAB2B	88	40.526
ENSOPRG00000007883	RAB5B	52	44.144	ENSOPRG00000007511	RAB30	93	44.144
ENSOPRG00000007883	RAB5B	66	33.566	ENSOPRG00000004472	RAB33A	73	33.566
ENSOPRG00000007883	RAB5B	82	33.333	ENSOPRG00000005358	RHEB	93	33.333
ENSOPRG00000007883	RAB5B	91	40.777	ENSOPRG00000002894	RAB25	94	40.777
ENSOPRG00000007883	RAB5B	83	30.556	ENSOPRG00000019175	NRAS	94	30.556
ENSOPRG00000007883	RAB5B	78	32.353	ENSOPRG00000015124	RERG	84	32.353
ENSOPRG00000007883	RAB5B	59	39.844	ENSOPRG00000001073	RAB33B	76	39.844
ENSOPRG00000007883	RAB5B	73	34.375	ENSOPRG00000016787	RAB36	50	34.375
ENSOPRG00000007883	RAB5B	82	84.746	ENSOPRG00000011278	RAB5A	100	84.746
ENSOPRG00000007883	RAB5B	62	30.986	ENSOPRG00000003294	ARL8B	73	30.986
ENSOPRG00000007883	RAB5B	51	32.479	ENSOPRG00000006034	-	98	32.479
ENSOPRG00000007883	RAB5B	90	43.367	ENSOPRG00000006595	RAB1A	98	43.367
ENSOPRG00000007883	RAB5B	77	45.783	ENSOPRG00000001164	RAB6B	80	45.783
ENSOPRG00000007883	RAB5B	80	82.456	ENSOPRG00000008255	RAB5C	96	82.456
ENSOPRG00000007883	RAB5B	75	34.568	ENSOPRG00000007436	-	95	34.568
ENSOPRG00000007883	RAB5B	81	44.000	ENSOPRG00000010355	RAB6A	90	44.000
ENSOPRG00000007883	RAB5B	90	34.848	ENSOPRG00000015018	RAB9A	97	34.848
ENSOPRG00000007883	RAB5B	74	31.548	ENSOPRG00000001065	REM2	52	30.286
ENSOPRG00000007883	RAB5B	75	45.342	ENSOPRG00000016426	RAB14	75	45.342
ENSOPRG00000007883	RAB5B	90	35.323	ENSOPRG00000015421	RAB9B	97	35.323
ENSOPRG00000007883	RAB5B	91	40.201	ENSOPRG00000004681	RAB11A	94	40.201

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000007883	RAB5B	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSOPRG00000007883	RAB5B	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSOPRG00000007883	RAB5B	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSOPRG00000007883	RAB5B	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
ENSOPRG00000007883	RAB5B	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSOPRG00000007883	RAB5B	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
ENSOPRG00000007883	RAB5B	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSOPRG00000007883	RAB5B	100	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSOPRG00000007883	RAB5B	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSOPRG00000007883	RAB5B	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSOPRG00000007883	RAB5B	100	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSOPRG00000007883	RAB5B	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSOPRG00000007883	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSOPRG00000007883	RAB5B	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSOPRG00000007883	RAB5B	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSOPRG00000007883	RAB5B	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSOPRG00000007883	RAB5B	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSOPRG00000007883	RAB5B	100	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSOPRG00000007883	RAB5B	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSOPRG00000007883	RAB5B	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSOPRG00000007883	RAB5B	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSOPRG00000007883	RAB5B	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSOPRG00000007883	RAB5B	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSOPRG00000007883	RAB5B	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSOPRG00000007883	RAB5B	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSOPRG00000007883	RAB5B	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
ENSOPRG00000007883	RAB5B	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSOPRG00000007883	RAB5B	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSOPRG00000007883	RAB5B	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSOPRG00000007883	RAB5B	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSOPRG00000007883	RAB5B	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSOPRG00000007883	RAB5B	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSOPRG00000007883	RAB5B	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSOPRG00000007883	RAB5B	100	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSOPRG00000007883	RAB5B	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSOPRG00000007883	RAB5B	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
ENSOPRG00000007883	RAB5B	100	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSOPRG00000007883	RAB5B	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSOPRG00000007883	RAB5B	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
ENSOPRG00000007883	RAB5B	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
ENSOPRG00000007883	RAB5B	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSOPRG00000007883	RAB5B	100	100.000	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
ENSOPRG00000007883	RAB5B	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSOPRG00000007883	RAB5B	100	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSOPRG00000007883	RAB5B	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSOPRG00000007883	RAB5B	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSOPRG00000007883	RAB5B	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSOPRG00000007883	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSOPRG00000007883	RAB5B	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSOPRG00000007883	RAB5B	100	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSOPRG00000007883	RAB5B	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSOPRG00000007883	RAB5B	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSOPRG00000007883	RAB5B	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSOPRG00000007883	RAB5B	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSOPRG00000007883	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes