EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000008254 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 42727 bases
Position: chrGeneScaffold_3831:33582-76308
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000007573	CPSF_A	PF03178.15	2.7e-51	1	2
ENSOPRP00000007573	CPSF_A	PF03178.15	2.7e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000008277	DDB1-201	3423	-	ENSOPRP00000007573	1140 (aa)	-	UPI00017A2907

Gene Model

Click here to download ENSOPRG00000008254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000008254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000008254	DDB1	90	90.980	ENSG00000167986	DDB1	90	90.980	Homo_sapiens
ENSOPRG00000008254	DDB1	88	82.669	ENSAPOG00000005036	ddb1	89	87.830	Acanthochromis_polyacanthus
ENSOPRG00000008254	DDB1	90	91.077	ENSAMEG00000016518	DDB1	90	91.077	Ailuropoda_melanoleuca
ENSOPRG00000008254	DDB1	76	88.175	ENSACIG00000020624	ddb1	89	88.175	Amphilophus_citrinellus
ENSOPRG00000008254	DDB1	90	82.444	ENSAOCG00000003066	ddb1	90	82.444	Amphiprion_ocellaris
ENSOPRG00000008254	DDB1	90	82.541	ENSAPEG00000000092	ddb1	90	82.541	Amphiprion_percula
ENSOPRG00000008254	DDB1	85	82.609	ENSATEG00000020571	ddb1	89	83.505	Anabas_testudineus
ENSOPRG00000008254	DDB1	90	89.072	ENSAPLG00000007174	DDB1	91	89.072	Anas_platyrhynchos
ENSOPRG00000008254	DDB1	90	88.652	ENSACAG00000017758	DDB1	90	88.652	Anolis_carolinensis
ENSOPRG00000008254	DDB1	90	90.980	ENSANAG00000021878	DDB1	90	90.980	Aotus_nancymaae
ENSOPRG00000008254	DDB1	90	82.832	ENSACLG00000012401	ddb1	87	86.369	Astatotilapia_calliptera
ENSOPRG00000008254	DDB1	90	90.883	ENSBTAG00000021569	DDB1	84	90.883	Bos_taurus
ENSOPRG00000008254	DDB1	84	38.584	WBGene00010890	ddb-1	84	38.470	Caenorhabditis_elegans
ENSOPRG00000008254	DDB1	90	90.980	ENSCJAG00000019319	DDB1	90	90.980	Callithrix_jacchus
ENSOPRG00000008254	DDB1	90	91.077	ENSCAFG00000016264	DDB1	90	91.077	Canis_familiaris
ENSOPRG00000008254	DDB1	85	90.166	ENSCAFG00020012722	DDB1	89	90.166	Canis_lupus_dingo
ENSOPRG00000008254	DDB1	90	90.883	ENSCHIG00000014969	DDB1	90	90.883	Capra_hircus
ENSOPRG00000008254	DDB1	90	90.495	ENSTSYG00000008027	DDB1	90	90.495	Carlito_syrichta
ENSOPRG00000008254	DDB1	90	90.495	ENSCAPG00000010786	DDB1	92	90.495	Cavia_aperea
ENSOPRG00000008254	DDB1	90	90.495	ENSCPOG00000009956	DDB1	90	90.495	Cavia_porcellus
ENSOPRG00000008254	DDB1	90	90.980	ENSCCAG00000035883	DDB1	90	90.980	Cebus_capucinus
ENSOPRG00000008254	DDB1	90	88.303	ENSCATG00000044495	DDB1	90	88.303	Cercocebus_atys
ENSOPRG00000008254	DDB1	90	90.495	ENSCLAG00000004126	DDB1	90	90.495	Chinchilla_lanigera
ENSOPRG00000008254	DDB1	90	90.980	ENSCSAG00000006392	DDB1	90	90.980	Chlorocebus_sabaeus
ENSOPRG00000008254	DDB1	69	100.000	ENSCHOG00000011377	DDB1	71	100.000	Choloepus_hoffmanni
ENSOPRG00000008254	DDB1	90	89.234	ENSCPBG00000017728	DDB1	90	89.234	Chrysemys_picta_bellii
ENSOPRG00000008254	DDB1	90	57.143	ENSCING00000007437	-	90	57.047	Ciona_intestinalis
ENSOPRG00000008254	DDB1	90	55.694	ENSCSAVG00000004783	-	95	58.427	Ciona_savignyi
ENSOPRG00000008254	DDB1	90	90.980	ENSCANG00000019948	DDB1	90	90.980	Colobus_angolensis_palliatus
ENSOPRG00000008254	DDB1	90	91.174	ENSCGRG00001016599	Ddb1	90	91.174	Cricetulus_griseus_chok1gshd
ENSOPRG00000008254	DDB1	90	91.174	ENSCGRG00000013427	Ddb1	90	91.174	Cricetulus_griseus_crigri
ENSOPRG00000008254	DDB1	84	82.143	ENSCSEG00000012499	ddb1	88	87.600	Cynoglossus_semilaevis
ENSOPRG00000008254	DDB1	85	82.158	ENSCVAG00000019531	ddb1	89	82.158	Cyprinodon_variegatus
ENSOPRG00000008254	DDB1	90	79.768	ENSDARG00000074431	ddb1	90	79.923	Danio_rerio
ENSOPRG00000008254	DDB1	85	89.752	ENSDNOG00000014884	DDB1	88	89.752	Dasypus_novemcinctus
ENSOPRG00000008254	DDB1	74	99.107	ENSDORG00000000127	Ddb1	89	99.107	Dipodomys_ordii
ENSOPRG00000008254	DDB1	90	55.985	FBgn0260962	pic	90	55.749	Drosophila_melanogaster
ENSOPRG00000008254	DDB1	61	99.310	ENSETEG00000001053	-	61	99.310	Echinops_telfairi
ENSOPRG00000008254	DDB1	65	85.230	ENSEBUG00000014593	ddb1	82	85.230	Eptatretus_burgeri
ENSOPRG00000008254	DDB1	90	90.883	ENSEASG00005008184	DDB1	90	90.883	Equus_asinus_asinus
ENSOPRG00000008254	DDB1	90	90.980	ENSECAG00000012136	DDB1	90	90.980	Equus_caballus
ENSOPRG00000008254	DDB1	75	84.906	ENSEEUG00000003194	DDB1	75	84.906	Erinaceus_europaeus
ENSOPRG00000008254	DDB1	90	82.638	ENSELUG00000023868	ddb1	90	82.638	Esox_lucius
ENSOPRG00000008254	DDB1	90	91.077	ENSFCAG00000029716	DDB1	90	91.077	Felis_catus
ENSOPRG00000008254	DDB1	90	89.168	ENSFALG00000011981	DDB1	90	89.168	Ficedula_albicollis
ENSOPRG00000008254	DDB1	90	90.398	ENSFDAG00000005128	DDB1	90	90.398	Fukomys_damarensis
ENSOPRG00000008254	DDB1	81	87.838	ENSFHEG00000022133	ddb1	88	89.110	Fundulus_heteroclitus
ENSOPRG00000008254	DDB1	71	94.314	ENSGMOG00000019386	ddb1	84	94.314	Gadus_morhua
ENSOPRG00000008254	DDB1	90	89.040	ENSGALG00000042333	DDB1	90	89.040	Gallus_gallus
ENSOPRG00000008254	DDB1	85	81.950	ENSGAFG00000013142	ddb1	89	81.950	Gambusia_affinis
ENSOPRG00000008254	DDB1	86	81.568	ENSGACG00000017182	ddb1	90	81.568	Gasterosteus_aculeatus
ENSOPRG00000008254	DDB1	90	89.331	ENSGAGG00000014124	DDB1	95	89.331	Gopherus_agassizii
ENSOPRG00000008254	DDB1	90	90.980	ENSGGOG00000004052	DDB1	90	90.980	Gorilla_gorilla
ENSOPRG00000008254	DDB1	90	82.832	ENSHBUG00000008873	ddb1	95	82.832	Haplochromis_burtoni
ENSOPRG00000008254	DDB1	90	90.398	ENSHGLG00000018430	DDB1	90	90.398	Heterocephalus_glaber_female
ENSOPRG00000008254	DDB1	90	90.107	ENSHGLG00100014475	DDB1	90	90.107	Heterocephalus_glaber_male
ENSOPRG00000008254	DDB1	85	81.696	ENSHCOG00000018670	ddb1	88	81.696	Hippocampus_comes
ENSOPRG00000008254	DDB1	90	81.959	ENSIPUG00000005612	DDB1	90	81.959	Ictalurus_punctatus
ENSOPRG00000008254	DDB1	90	90.980	ENSSTOG00000007552	DDB1	90	90.980	Ictidomys_tridecemlineatus
ENSOPRG00000008254	DDB1	90	90.786	ENSJJAG00000017769	Ddb1	90	90.786	Jaculus_jaculus
ENSOPRG00000008254	DDB1	85	82.158	ENSKMAG00000002315	ddb1	90	82.158	Kryptolebias_marmoratus
ENSOPRG00000008254	DDB1	76	87.945	ENSLBEG00000017065	ddb1	90	87.945	Labrus_bergylta
ENSOPRG00000008254	DDB1	90	85.479	ENSLACG00000017611	DDB1	90	85.479	Latimeria_chalumnae
ENSOPRG00000008254	DDB1	81	73.405	ENSLOCG00000000012	ddb1	89	73.405	Lepisosteus_oculatus
ENSOPRG00000008254	DDB1	90	90.786	ENSLAFG00000011513	DDB1	90	90.786	Loxodonta_africana
ENSOPRG00000008254	DDB1	90	90.980	ENSMFAG00000042035	DDB1	90	90.980	Macaca_fascicularis
ENSOPRG00000008254	DDB1	90	90.900	ENSMMUG00000002691	DDB1	90	90.900	Macaca_mulatta
ENSOPRG00000008254	DDB1	90	90.980	ENSMNEG00000031559	DDB1	90	90.980	Macaca_nemestrina
ENSOPRG00000008254	DDB1	90	90.980	ENSMLEG00000044136	DDB1	90	90.980	Mandrillus_leucophaeus
ENSOPRG00000008254	DDB1	90	82.929	ENSMAMG00000014372	ddb1	90	82.929	Mastacembelus_armatus
ENSOPRG00000008254	DDB1	90	82.735	ENSMZEG00005013835	ddb1	90	82.735	Maylandia_zebra
ENSOPRG00000008254	DDB1	90	88.781	ENSMGAG00000004990	DDB1	96	88.781	Meleagris_gallopavo
ENSOPRG00000008254	DDB1	90	91.174	ENSMAUG00000012926	Ddb1	90	91.174	Mesocricetus_auratus
ENSOPRG00000008254	DDB1	90	90.980	ENSMICG00000013703	DDB1	90	90.980	Microcebus_murinus
ENSOPRG00000008254	DDB1	90	91.174	ENSMOCG00000020499	Ddb1	90	91.174	Microtus_ochrogaster
ENSOPRG00000008254	DDB1	76	88.060	ENSMMOG00000001758	ddb1	89	88.060	Mola_mola
ENSOPRG00000008254	DDB1	84	87.835	ENSMODG00000020353	DDB1	90	83.046	Monodelphis_domestica
ENSOPRG00000008254	DDB1	90	82.832	ENSMALG00000014071	ddb1	90	82.832	Monopterus_albus
ENSOPRG00000008254	DDB1	90	91.174	MGP_CAROLIEiJ_G0022695	Ddb1	90	91.174	Mus_caroli
ENSOPRG00000008254	DDB1	90	91.077	ENSMUSG00000024740	Ddb1	90	91.077	Mus_musculus
ENSOPRG00000008254	DDB1	90	91.174	MGP_PahariEiJ_G0014189	Ddb1	90	91.174	Mus_pahari
ENSOPRG00000008254	DDB1	90	91.077	MGP_SPRETEiJ_G0023609	Ddb1	90	91.077	Mus_spretus
ENSOPRG00000008254	DDB1	85	98.020	ENSMPUG00000014200	DDB1	87	98.020	Mustela_putorius_furo
ENSOPRG00000008254	DDB1	90	90.592	ENSMLUG00000013232	DDB1	90	90.592	Myotis_lucifugus
ENSOPRG00000008254	DDB1	90	90.689	ENSNGAG00000009384	Ddb1	90	90.689	Nannospalax_galili
ENSOPRG00000008254	DDB1	90	82.929	ENSNBRG00000019581	ddb1	90	82.929	Neolamprologus_brichardi
ENSOPRG00000008254	DDB1	90	87.632	ENSNLEG00000002022	DDB1	90	87.632	Nomascus_leucogenys
ENSOPRG00000008254	DDB1	80	95.092	ENSMEUG00000001099	DDB1	82	95.092	Notamacropus_eugenii
ENSOPRG00000008254	DDB1	90	90.495	ENSODEG00000002419	DDB1	90	90.495	Octodon_degus
ENSOPRG00000008254	DDB1	90	82.832	ENSONIG00000005804	ddb1	90	82.832	Oreochromis_niloticus
ENSOPRG00000008254	DDB1	90	89.428	ENSOANG00000004897	DDB1	99	89.428	Ornithorhynchus_anatinus
ENSOPRG00000008254	DDB1	90	90.980	ENSOCUG00000001667	DDB1	90	90.980	Oryctolagus_cuniculus
ENSOPRG00000008254	DDB1	86	81.059	ENSORLG00000001399	ddb1	90	81.059	Oryzias_latipes
ENSOPRG00000008254	DDB1	86	81.059	ENSORLG00020001277	ddb1	90	81.059	Oryzias_latipes_hni
ENSOPRG00000008254	DDB1	85	82.091	ENSORLG00015002080	ddb1	92	82.091	Oryzias_latipes_hsok
ENSOPRG00000008254	DDB1	87	80.972	ENSOMEG00000006181	ddb1	89	80.972	Oryzias_melastigma
ENSOPRG00000008254	DDB1	90	90.786	ENSOGAG00000016103	DDB1	90	90.786	Otolemur_garnettii
ENSOPRG00000008254	DDB1	89	90.730	ENSOARG00000011716	DDB1	88	90.730	Ovis_aries
ENSOPRG00000008254	DDB1	90	90.980	ENSPPAG00000035343	DDB1	90	90.980	Pan_paniscus
ENSOPRG00000008254	DDB1	90	91.077	ENSPPRG00000013300	DDB1	90	91.077	Panthera_pardus
ENSOPRG00000008254	DDB1	90	91.077	ENSPTIG00000006909	DDB1	90	91.077	Panthera_tigris_altaica
ENSOPRG00000008254	DDB1	90	90.980	ENSPTRG00000003737	DDB1	90	90.980	Pan_troglodytes
ENSOPRG00000008254	DDB1	90	90.980	ENSPANG00000000242	DDB1	90	90.980	Papio_anubis
ENSOPRG00000008254	DDB1	85	82.054	ENSPKIG00000019213	ddb1	84	82.054	Paramormyrops_kingsleyae
ENSOPRG00000008254	DDB1	90	88.867	ENSPSIG00000013275	DDB1	92	88.867	Pelodiscus_sinensis
ENSOPRG00000008254	DDB1	76	87.830	ENSPMGG00000021179	ddb1	89	87.830	Periophthalmus_magnuspinnatus
ENSOPRG00000008254	DDB1	90	91.174	ENSPEMG00000012241	Ddb1	90	91.174	Peromyscus_maniculatus_bairdii
ENSOPRG00000008254	DDB1	76	83.238	ENSPMAG00000008479	ddb1	86	83.238	Petromyzon_marinus
ENSOPRG00000008254	DDB1	90	90.495	ENSPCIG00000002643	DDB1	90	90.495	Phascolarctos_cinereus
ENSOPRG00000008254	DDB1	90	82.171	ENSPFOG00000002768	ddb1	90	82.171	Poecilia_formosa
ENSOPRG00000008254	DDB1	90	81.959	ENSPLAG00000017227	ddb1	90	81.959	Poecilia_latipinna
ENSOPRG00000008254	DDB1	90	81.959	ENSPMEG00000011398	ddb1	90	81.959	Poecilia_mexicana
ENSOPRG00000008254	DDB1	85	82.091	ENSPREG00000004440	ddb1	88	82.091	Poecilia_reticulata
ENSOPRG00000008254	DDB1	90	85.632	ENSPPYG00000003193	DDB1	90	85.632	Pongo_abelii
ENSOPRG00000008254	DDB1	73	100.000	ENSPCAG00000011040	DDB1	73	100.000	Procavia_capensis
ENSOPRG00000008254	DDB1	90	89.351	ENSPCOG00000015176	DDB1	90	89.351	Propithecus_coquereli
ENSOPRG00000008254	DDB1	90	90.883	ENSPVAG00000003847	DDB1	90	90.883	Pteropus_vampyrus
ENSOPRG00000008254	DDB1	85	82.261	ENSPNAG00000006635	ddb1	87	82.261	Pygocentrus_nattereri
ENSOPRG00000008254	DDB1	90	91.077	ENSRNOG00000020715	Ddb1	90	91.077	Rattus_norvegicus
ENSOPRG00000008254	DDB1	90	90.980	ENSRBIG00000033611	DDB1	90	90.980	Rhinopithecus_bieti
ENSOPRG00000008254	DDB1	90	90.980	ENSRROG00000041407	DDB1	90	90.980	Rhinopithecus_roxellana
ENSOPRG00000008254	DDB1	90	90.883	ENSSBOG00000019775	DDB1	90	90.883	Saimiri_boliviensis_boliviensis
ENSOPRG00000008254	DDB1	90	88.458	ENSSHAG00000011600	DDB1	96	88.458	Sarcophilus_harrisii
ENSOPRG00000008254	DDB1	85	82.523	ENSSFOG00015011151	ddb1	87	82.523	Scleropages_formosus
ENSOPRG00000008254	DDB1	90	82.444	ENSSMAG00000009495	ddb1	90	82.444	Scophthalmus_maximus
ENSOPRG00000008254	DDB1	90	82.735	ENSSDUG00000004642	ddb1	90	82.735	Seriola_dumerili
ENSOPRG00000008254	DDB1	90	82.735	ENSSLDG00000015804	ddb1	90	82.735	Seriola_lalandi_dorsalis
ENSOPRG00000008254	DDB1	60	100.000	ENSSARG00000003290	-	62	100.000	Sorex_araneus
ENSOPRG00000008254	DDB1	90	89.234	ENSSPUG00000019338	DDB1	90	89.234	Sphenodon_punctatus
ENSOPRG00000008254	DDB1	85	82.402	ENSSPAG00000009888	ddb1	89	84.977	Stegastes_partitus
ENSOPRG00000008254	DDB1	90	90.107	ENSSSCG00000013094	DDB1	90	90.107	Sus_scrofa
ENSOPRG00000008254	DDB1	90	88.943	ENSTGUG00000006414	DDB1	90	88.943	Taeniopygia_guttata
ENSOPRG00000008254	DDB1	85	81.120	ENSTRUG00000016682	ddb1	89	83.372	Takifugu_rubripes
ENSOPRG00000008254	DDB1	83	85.149	ENSTNIG00000009565	ddb1	94	85.149	Tetraodon_nigroviridis
ENSOPRG00000008254	DDB1	85	83.029	ENSTTRG00000011055	DDB1	86	83.029	Tursiops_truncatus
ENSOPRG00000008254	DDB1	85	90.166	ENSUAMG00000017793	DDB1	84	90.166	Ursus_americanus
ENSOPRG00000008254	DDB1	85	90.166	ENSUMAG00000011788	DDB1	88	90.166	Ursus_maritimus
ENSOPRG00000008254	DDB1	82	100.000	ENSVPAG00000007963	DDB1	84	100.000	Vicugna_pacos
ENSOPRG00000008254	DDB1	90	90.980	ENSVVUG00000004987	DDB1	90	90.980	Vulpes_vulpes
ENSOPRG00000008254	DDB1	85	95.050	ENSXETG00000008820	ddb1	85	95.050	Xenopus_tropicalis
ENSOPRG00000008254	DDB1	76	87.486	ENSXCOG00000013956	ddb1	89	87.486	Xiphophorus_couchianus
ENSOPRG00000008254	DDB1	85	81.950	ENSXMAG00000000022	ddb1	89	81.950	Xiphophorus_maculatus