EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000008255 (Gene tree)
Gene ID: -
Gene Symbol: RAB5C
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 10032 bases
Position: chrGeneScaffold_1125:3866-13897
Accession: 9785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000007545	MMR_HSR1	PF01926.23	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000008246	RAB5C-201	534	-	ENSOPRP00000007545	178 (aa)	-	UPI0001777113

Gene Model

Click here to download ENSOPRG00000008255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000008255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000008255	RAB5C	84	32.680	ENSOPRG00000005358	RHEB	83	32.680
ENSOPRG00000008255	RAB5C	90	33.939	ENSOPRG00000015124	RERG	81	33.939
ENSOPRG00000008255	RAB5C	67	31.452	ENSOPRG00000003294	ARL8B	63	31.452
ENSOPRG00000008255	RAB5C	75	38.971	ENSOPRG00000001073	RAB33B	77	39.535
ENSOPRG00000008255	RAB5C	89	32.075	ENSOPRG00000012068	KRAS	83	32.075
ENSOPRG00000008255	RAB5C	62	44.144	ENSOPRG00000007511	RAB30	93	44.144
ENSOPRG00000008255	RAB5C	87	43.226	ENSOPRG00000016163	RAB2B	72	43.226
ENSOPRG00000008255	RAB5C	100	84.831	ENSOPRG00000011278	RAB5A	100	84.831
ENSOPRG00000008255	RAB5C	94	42.515	ENSOPRG00000001164	RAB6B	80	42.515
ENSOPRG00000008255	RAB5C	94	42.515	ENSOPRG00000010355	RAB6A	88	42.515
ENSOPRG00000008255	RAB5C	96	82.456	ENSOPRG00000007883	RAB5B	80	82.456
ENSOPRG00000008255	RAB5C	93	31.325	ENSOPRG00000007436	-	96	31.325
ENSOPRG00000008255	RAB5C	89	31.447	ENSOPRG00000019175	NRAS	83	31.447
ENSOPRG00000008255	RAB5C	87	39.355	ENSOPRG00000016426	RAB14	72	39.355
ENSOPRG00000008255	RAB5C	57	33.028	ENSOPRG00000006034	-	92	33.028
ENSOPRG00000008255	RAB5C	88	43.750	ENSOPRG00000004681	RAB11A	76	43.750
ENSOPRG00000008255	RAB5C	88	45.860	ENSOPRG00000006595	RAB1A	80	45.860
ENSOPRG00000008255	RAB5C	68	36.585	ENSOPRG00000004472	RAB33A	63	36.585
ENSOPRG00000008255	RAB5C	87	33.540	ENSOPRG00000015018	RAB9A	79	33.540
ENSOPRG00000008255	RAB5C	87	33.544	ENSOPRG00000015421	RAB9B	79	33.544
ENSOPRG00000008255	RAB5C	88	42.675	ENSOPRG00000002894	RAB25	74	42.675
ENSOPRG00000008255	RAB5C	56	45.455	ENSOPRG00000014416	-	92	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000008255	RAB5C	100	92.697	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSOPRG00000008255	RAB5C	100	88.764	ENSAPOG00000016864	rab5c	81	88.764	Acanthochromis_polyacanthus
ENSOPRG00000008255	RAB5C	100	92.697	ENSAMEG00000006003	RAB5C	82	92.697	Ailuropoda_melanoleuca
ENSOPRG00000008255	RAB5C	100	87.640	ENSACIG00000010896	rab5c	81	87.640	Amphilophus_citrinellus
ENSOPRG00000008255	RAB5C	100	88.764	ENSAOCG00000016614	rab5c	81	88.764	Amphiprion_ocellaris
ENSOPRG00000008255	RAB5C	97	88.439	ENSAPEG00000017868	-	79	88.439	Amphiprion_percula
ENSOPRG00000008255	RAB5C	100	88.764	ENSATEG00000001937	rab5c	82	88.764	Anabas_testudineus
ENSOPRG00000008255	RAB5C	100	92.135	ENSANAG00000025390	RAB5C	87	92.135	Aotus_nancymaae
ENSOPRG00000008255	RAB5C	100	87.079	ENSACLG00000002706	rab5c	81	87.079	Astatotilapia_calliptera
ENSOPRG00000008255	RAB5C	97	88.372	ENSACLG00000008615	-	81	87.778	Astatotilapia_calliptera
ENSOPRG00000008255	RAB5C	100	88.827	ENSAMXG00000043717	rab5c	81	88.827	Astyanax_mexicanus
ENSOPRG00000008255	RAB5C	97	88.953	ENSAMXG00000037267	-	82	88.953	Astyanax_mexicanus
ENSOPRG00000008255	RAB5C	100	92.697	ENSBTAG00000006982	RAB5C	82	92.697	Bos_taurus
ENSOPRG00000008255	RAB5C	100	78.771	WBGene00004268	rab-5	85	78.771	Caenorhabditis_elegans
ENSOPRG00000008255	RAB5C	100	92.697	ENSCAFG00000015629	RAB5C	82	92.697	Canis_familiaris
ENSOPRG00000008255	RAB5C	100	92.697	ENSCAFG00020013537	RAB5C	82	92.697	Canis_lupus_dingo
ENSOPRG00000008255	RAB5C	100	92.697	ENSCHIG00000012960	RAB5C	82	92.697	Capra_hircus
ENSOPRG00000008255	RAB5C	100	92.697	ENSTSYG00000030531	RAB5C	82	92.697	Carlito_syrichta
ENSOPRG00000008255	RAB5C	100	92.135	ENSCCAG00000025940	RAB5C	82	92.135	Cebus_capucinus
ENSOPRG00000008255	RAB5C	100	92.697	ENSCATG00000040873	RAB5C	82	92.697	Cercocebus_atys
ENSOPRG00000008255	RAB5C	100	92.135	ENSCLAG00000016650	RAB5C	82	92.135	Chinchilla_lanigera
ENSOPRG00000008255	RAB5C	100	92.135	ENSCHOG00000009886	RAB5C	100	92.135	Choloepus_hoffmanni
ENSOPRG00000008255	RAB5C	100	80.899	ENSCING00000003340	-	82	80.899	Ciona_intestinalis
ENSOPRG00000008255	RAB5C	100	79.775	ENSCSAVG00000000613	-	89	86.897	Ciona_savignyi
ENSOPRG00000008255	RAB5C	100	92.697	ENSCGRG00001014226	Rab5c	82	92.697	Cricetulus_griseus_chok1gshd
ENSOPRG00000008255	RAB5C	100	92.697	ENSCGRG00000007534	Rab5c	82	92.697	Cricetulus_griseus_crigri
ENSOPRG00000008255	RAB5C	100	88.764	ENSCSEG00000017024	rab5c	81	88.764	Cynoglossus_semilaevis
ENSOPRG00000008255	RAB5C	100	88.764	ENSCVAG00000009550	rab5c	81	88.764	Cyprinodon_variegatus
ENSOPRG00000008255	RAB5C	100	92.135	ENSDNOG00000038853	RAB5C	88	92.135	Dasypus_novemcinctus
ENSOPRG00000008255	RAB5C	100	91.573	ENSDORG00000006819	Rab5c	82	91.573	Dipodomys_ordii
ENSOPRG00000008255	RAB5C	99	76.836	FBgn0014010	Rab5	80	76.836	Drosophila_melanogaster
ENSOPRG00000008255	RAB5C	100	80.899	ENSEBUG00000014794	rab5c	84	80.899	Eptatretus_burgeri
ENSOPRG00000008255	RAB5C	100	92.697	ENSEASG00005009281	RAB5C	82	92.697	Equus_asinus_asinus
ENSOPRG00000008255	RAB5C	100	92.697	ENSECAG00000025054	RAB5C	82	92.697	Equus_caballus
ENSOPRG00000008255	RAB5C	100	92.697	ENSEEUG00000002790	RAB5C	82	92.697	Erinaceus_europaeus
ENSOPRG00000008255	RAB5C	100	88.764	ENSELUG00000018516	rab5c	82	88.764	Esox_lucius
ENSOPRG00000008255	RAB5C	100	87.640	ENSELUG00000010439	-	81	87.640	Esox_lucius
ENSOPRG00000008255	RAB5C	100	92.697	ENSFCAG00000002148	RAB5C	82	92.697	Felis_catus
ENSOPRG00000008255	RAB5C	100	91.573	ENSFDAG00000021541	RAB5C	82	91.573	Fukomys_damarensis
ENSOPRG00000008255	RAB5C	100	88.827	ENSFHEG00000015268	-	81	88.827	Fundulus_heteroclitus
ENSOPRG00000008255	RAB5C	100	88.202	ENSFHEG00000012117	rab5c	81	88.202	Fundulus_heteroclitus
ENSOPRG00000008255	RAB5C	97	80.814	ENSGMOG00000001876	-	99	80.814	Gadus_morhua
ENSOPRG00000008255	RAB5C	100	87.640	ENSGMOG00000015096	rab5c	81	87.640	Gadus_morhua
ENSOPRG00000008255	RAB5C	100	88.764	ENSGAFG00000000884	rab5c	81	88.764	Gambusia_affinis
ENSOPRG00000008255	RAB5C	100	88.268	ENSGAFG00000003642	-	80	88.268	Gambusia_affinis
ENSOPRG00000008255	RAB5C	100	87.640	ENSGACG00000008659	rab5c	81	87.640	Gasterosteus_aculeatus
ENSOPRG00000008255	RAB5C	100	92.697	ENSGGOG00000005472	RAB5C	82	92.697	Gorilla_gorilla
ENSOPRG00000008255	RAB5C	100	87.079	ENSHBUG00000002014	rab5c	81	87.079	Haplochromis_burtoni
ENSOPRG00000008255	RAB5C	97	88.372	ENSHBUG00000006823	-	81	87.778	Haplochromis_burtoni
ENSOPRG00000008255	RAB5C	100	91.011	ENSHGLG00000012067	RAB5C	82	91.011	Heterocephalus_glaber_female
ENSOPRG00000008255	RAB5C	100	88.268	ENSHCOG00000004662	rab5c	80	88.268	Hippocampus_comes
ENSOPRG00000008255	RAB5C	97	83.815	ENSHCOG00000020238	-	83	83.425	Hippocampus_comes
ENSOPRG00000008255	RAB5C	97	85.465	ENSIPUG00000020082	rab5c	81	86.667	Ictalurus_punctatus
ENSOPRG00000008255	RAB5C	100	92.697	ENSSTOG00000006620	RAB5C	82	92.697	Ictidomys_tridecemlineatus
ENSOPRG00000008255	RAB5C	100	92.697	ENSJJAG00000021181	Rab5c	82	92.697	Jaculus_jaculus
ENSOPRG00000008255	RAB5C	100	87.640	ENSKMAG00000020038	rab5c	81	87.640	Kryptolebias_marmoratus
ENSOPRG00000008255	RAB5C	100	86.034	ENSKMAG00000017417	-	81	86.034	Kryptolebias_marmoratus
ENSOPRG00000008255	RAB5C	100	88.764	ENSLBEG00000004128	rab5c	81	88.764	Labrus_bergylta
ENSOPRG00000008255	RAB5C	100	86.592	ENSLBEG00000010408	-	81	86.592	Labrus_bergylta
ENSOPRG00000008255	RAB5C	100	89.888	ENSLOCG00000012566	rab5c	83	89.888	Lepisosteus_oculatus
ENSOPRG00000008255	RAB5C	100	92.697	ENSMFAG00000039627	RAB5C	82	92.697	Macaca_fascicularis
ENSOPRG00000008255	RAB5C	100	92.697	ENSMNEG00000000355	RAB5C	82	92.697	Macaca_nemestrina
ENSOPRG00000008255	RAB5C	100	86.592	ENSMAMG00000016207	-	81	86.592	Mastacembelus_armatus
ENSOPRG00000008255	RAB5C	100	87.079	ENSMAMG00000022322	rab5c	81	87.079	Mastacembelus_armatus
ENSOPRG00000008255	RAB5C	100	87.079	ENSMZEG00005022735	rab5c	81	87.079	Maylandia_zebra
ENSOPRG00000008255	RAB5C	97	88.372	ENSMZEG00005021090	-	81	87.778	Maylandia_zebra
ENSOPRG00000008255	RAB5C	100	92.697	ENSMAUG00000015005	Rab5c	82	92.697	Mesocricetus_auratus
ENSOPRG00000008255	RAB5C	100	92.135	ENSMICG00000041608	RAB5C	82	92.135	Microcebus_murinus
ENSOPRG00000008255	RAB5C	100	92.697	ENSMOCG00000018531	-	82	92.697	Microtus_ochrogaster
ENSOPRG00000008255	RAB5C	100	88.202	ENSMMOG00000020621	rab5c	81	88.202	Mola_mola
ENSOPRG00000008255	RAB5C	97	86.705	ENSMALG00000006052	rab5c	78	86.705	Monopterus_albus
ENSOPRG00000008255	RAB5C	100	85.475	ENSMALG00000022348	-	81	85.475	Monopterus_albus
ENSOPRG00000008255	RAB5C	100	92.697	MGP_CAROLIEiJ_G0017184	Rab5c	82	92.697	Mus_caroli
ENSOPRG00000008255	RAB5C	100	92.697	ENSMUSG00000019173	Rab5c	82	92.697	Mus_musculus
ENSOPRG00000008255	RAB5C	100	92.697	MGP_PahariEiJ_G0018314	Rab5c	82	92.697	Mus_pahari
ENSOPRG00000008255	RAB5C	100	92.697	MGP_SPRETEiJ_G0018027	Rab5c	82	92.697	Mus_spretus
ENSOPRG00000008255	RAB5C	100	92.697	ENSMPUG00000010554	RAB5C	82	92.697	Mustela_putorius_furo
ENSOPRG00000008255	RAB5C	100	91.573	ENSNGAG00000010286	Rab5c	82	91.573	Nannospalax_galili
ENSOPRG00000008255	RAB5C	100	87.640	ENSNBRG00000018165	rab5c	81	87.640	Neolamprologus_brichardi
ENSOPRG00000008255	RAB5C	97	88.372	ENSNBRG00000016922	-	81	87.778	Neolamprologus_brichardi
ENSOPRG00000008255	RAB5C	100	91.573	ENSODEG00000017920	RAB5C	82	91.573	Octodon_degus
ENSOPRG00000008255	RAB5C	100	87.640	ENSONIG00000001113	rab5c	81	87.640	Oreochromis_niloticus
ENSOPRG00000008255	RAB5C	100	87.079	ENSORLG00000003882	rab5c	82	87.079	Oryzias_latipes
ENSOPRG00000008255	RAB5C	100	87.079	ENSORLG00020008388	rab5c	82	87.079	Oryzias_latipes_hni
ENSOPRG00000008255	RAB5C	100	87.079	ENSORLG00015021900	rab5c	82	87.079	Oryzias_latipes_hsok
ENSOPRG00000008255	RAB5C	100	87.079	ENSOMEG00000023078	rab5c	82	87.079	Oryzias_melastigma
ENSOPRG00000008255	RAB5C	100	92.135	ENSOGAG00000009456	RAB5C	82	92.135	Otolemur_garnettii
ENSOPRG00000008255	RAB5C	100	92.697	ENSOARG00000018768	RAB5C	82	92.697	Ovis_aries
ENSOPRG00000008255	RAB5C	100	92.697	ENSPPAG00000037206	RAB5C	82	92.697	Pan_paniscus
ENSOPRG00000008255	RAB5C	100	92.697	ENSPPRG00000005745	RAB5C	82	92.697	Panthera_pardus
ENSOPRG00000008255	RAB5C	100	92.697	ENSPTIG00000008177	RAB5C	82	92.697	Panthera_tigris_altaica
ENSOPRG00000008255	RAB5C	100	92.697	ENSPTRG00000009194	RAB5C	82	92.697	Pan_troglodytes
ENSOPRG00000008255	RAB5C	100	88.202	ENSPKIG00000001237	-	82	88.202	Paramormyrops_kingsleyae
ENSOPRG00000008255	RAB5C	100	88.764	ENSPKIG00000020112	-	82	88.764	Paramormyrops_kingsleyae
ENSOPRG00000008255	RAB5C	100	84.831	ENSPMGG00000010792	rab5c	80	86.705	Periophthalmus_magnuspinnatus
ENSOPRG00000008255	RAB5C	100	92.697	ENSPEMG00000017971	Rab5c	82	92.697	Peromyscus_maniculatus_bairdii
ENSOPRG00000008255	RAB5C	100	80.899	ENSPMAG00000007867	rab5c	84	80.899	Petromyzon_marinus
ENSOPRG00000008255	RAB5C	100	81.421	ENSPMAG00000000008	rab5c	84	81.421	Petromyzon_marinus
ENSOPRG00000008255	RAB5C	100	81.461	ENSPMAG00000001399	rab5c	85	81.461	Petromyzon_marinus
ENSOPRG00000008255	RAB5C	100	91.573	ENSPCIG00000020225	-	82	91.573	Phascolarctos_cinereus
ENSOPRG00000008255	RAB5C	100	87.709	ENSPLAG00000016333	-	82	87.709	Poecilia_latipinna
ENSOPRG00000008255	RAB5C	100	88.764	ENSPLAG00000004790	rab5c	81	88.764	Poecilia_latipinna
ENSOPRG00000008255	RAB5C	100	88.268	ENSPMEG00000012614	-	80	88.268	Poecilia_mexicana
ENSOPRG00000008255	RAB5C	100	88.764	ENSPMEG00000011336	rab5c	81	88.764	Poecilia_mexicana
ENSOPRG00000008255	RAB5C	100	88.764	ENSPREG00000010146	rab5c	81	88.764	Poecilia_reticulata
ENSOPRG00000008255	RAB5C	100	88.268	ENSPREG00000022167	-	87	88.268	Poecilia_reticulata
ENSOPRG00000008255	RAB5C	100	92.697	ENSPPYG00000008398	RAB5C	82	92.697	Pongo_abelii
ENSOPRG00000008255	RAB5C	100	91.573	ENSPCAG00000016412	RAB5C	83	91.573	Procavia_capensis
ENSOPRG00000008255	RAB5C	100	91.573	ENSPCOG00000026327	RAB5C	82	91.573	Propithecus_coquereli
ENSOPRG00000008255	RAB5C	100	92.697	ENSPVAG00000003867	RAB5C	82	92.697	Pteropus_vampyrus
ENSOPRG00000008255	RAB5C	97	88.372	ENSPNYG00000015851	-	81	87.778	Pundamilia_nyererei
ENSOPRG00000008255	RAB5C	100	87.079	ENSPNYG00000010615	rab5c	81	87.079	Pundamilia_nyererei
ENSOPRG00000008255	RAB5C	100	88.827	ENSPNAG00000028138	rab5c	81	88.827	Pygocentrus_nattereri
ENSOPRG00000008255	RAB5C	97	88.372	ENSPNAG00000002218	-	81	88.372	Pygocentrus_nattereri
ENSOPRG00000008255	RAB5C	100	92.697	ENSRNOG00000018568	Rab5c	82	92.697	Rattus_norvegicus
ENSOPRG00000008255	RAB5C	100	92.697	ENSRBIG00000031376	RAB5C	82	92.697	Rhinopithecus_bieti
ENSOPRG00000008255	RAB5C	100	92.697	ENSRROG00000032895	RAB5C	82	92.697	Rhinopithecus_roxellana
ENSOPRG00000008255	RAB5C	100	92.135	ENSSBOG00000032552	-	82	92.135	Saimiri_boliviensis_boliviensis
ENSOPRG00000008255	RAB5C	100	92.135	ENSSHAG00000005267	-	82	92.135	Sarcophilus_harrisii
ENSOPRG00000008255	RAB5C	100	85.393	ENSSFOG00015009988	-	81	85.393	Scleropages_formosus
ENSOPRG00000008255	RAB5C	100	88.202	ENSSMAG00000007323	rab5c	81	88.202	Scophthalmus_maximus
ENSOPRG00000008255	RAB5C	100	88.764	ENSSDUG00000023008	rab5c	81	88.764	Seriola_dumerili
ENSOPRG00000008255	RAB5C	100	88.764	ENSSLDG00000017771	rab5c	81	88.764	Seriola_lalandi_dorsalis
ENSOPRG00000008255	RAB5C	100	92.135	ENSSPUG00000012950	-	82	92.135	Sphenodon_punctatus
ENSOPRG00000008255	RAB5C	100	88.764	ENSSPAG00000006436	rab5c	81	88.764	Stegastes_partitus
ENSOPRG00000008255	RAB5C	100	92.697	ENSSSCG00000032467	RAB5C	82	92.697	Sus_scrofa
ENSOPRG00000008255	RAB5C	100	87.079	ENSTRUG00000015590	rab5c	81	87.079	Takifugu_rubripes
ENSOPRG00000008255	RAB5C	96	88.304	ENSTNIG00000011711	rab5c	77	88.304	Tetraodon_nigroviridis
ENSOPRG00000008255	RAB5C	100	92.697	ENSTBEG00000007092	RAB5C	82	92.697	Tupaia_belangeri
ENSOPRG00000008255	RAB5C	100	92.697	ENSTTRG00000006673	RAB5C	82	92.697	Tursiops_truncatus
ENSOPRG00000008255	RAB5C	100	92.697	ENSUAMG00000024343	RAB5C	82	92.697	Ursus_americanus
ENSOPRG00000008255	RAB5C	100	92.697	ENSUMAG00000023270	RAB5C	82	92.697	Ursus_maritimus
ENSOPRG00000008255	RAB5C	100	88.827	ENSXCOG00000006300	-	80	88.827	Xiphophorus_couchianus
ENSOPRG00000008255	RAB5C	100	88.764	ENSXCOG00000016788	rab5c	81	88.764	Xiphophorus_couchianus
ENSOPRG00000008255	RAB5C	100	88.764	ENSXMAG00000003266	rab5c	81	88.764	Xiphophorus_maculatus
ENSOPRG00000008255	RAB5C	100	88.827	ENSXMAG00000022179	-	82	88.827	Xiphophorus_maculatus