EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000008340 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 5565 bases
Position: chrGeneScaffold_873:11969-17533
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000007632	PseudoU_synth_2	PF00849.22	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000008339	RPUSD1-201	897	-	ENSOPRP00000007632	298 (aa)	-	UPI0001775A1A

Gene Model

Click here to download ENSOPRG00000008340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000008340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000008340	RPUSD1	99	75.484	ENSG00000007376	RPUSD1	100	84.524	Homo_sapiens
ENSOPRG00000008340	RPUSD1	98	49.669	ENSAPOG00000022221	rpusd1	98	49.669	Acanthochromis_polyacanthus
ENSOPRG00000008340	RPUSD1	99	77.333	ENSAMEG00000007461	RPUSD1	99	77.333	Ailuropoda_melanoleuca
ENSOPRG00000008340	RPUSD1	98	52.443	ENSACIG00000015863	rpusd1	98	52.614	Amphilophus_citrinellus
ENSOPRG00000008340	RPUSD1	98	49.836	ENSAOCG00000021975	rpusd1	95	49.836	Amphiprion_ocellaris
ENSOPRG00000008340	RPUSD1	98	50.164	ENSAPEG00000001316	rpusd1	95	50.164	Amphiprion_percula
ENSOPRG00000008340	RPUSD1	85	56.917	ENSATEG00000002984	rpusd1	98	51.475	Anabas_testudineus
ENSOPRG00000008340	RPUSD1	78	51.852	ENSAPLG00000012316	RPUSD1	99	51.852	Anas_platyrhynchos
ENSOPRG00000008340	RPUSD1	99	60.596	ENSACAG00000008953	RPUSD1	100	60.596	Anolis_carolinensis
ENSOPRG00000008340	RPUSD1	99	77.097	ENSANAG00000024709	RPUSD1	99	77.742	Aotus_nancymaae
ENSOPRG00000008340	RPUSD1	98	50.814	ENSACLG00000013692	rpusd1	98	52.117	Astatotilapia_calliptera
ENSOPRG00000008340	RPUSD1	99	55.219	ENSAMXG00000019802	rpusd1	100	55.219	Astyanax_mexicanus
ENSOPRG00000008340	RPUSD1	99	76.144	ENSBTAG00000000179	RPUSD1	99	76.144	Bos_taurus
ENSOPRG00000008340	RPUSD1	99	76.129	ENSCJAG00000012253	RPUSD1	99	77.097	Callithrix_jacchus
ENSOPRG00000008340	RPUSD1	100	77.152	ENSCAFG00000019614	RPUSD1	100	77.815	Canis_familiaris
ENSOPRG00000008340	RPUSD1	100	77.152	ENSCAFG00020008891	RPUSD1	100	77.815	Canis_lupus_dingo
ENSOPRG00000008340	RPUSD1	99	75.163	ENSCHIG00000012872	RPUSD1	99	75.163	Capra_hircus
ENSOPRG00000008340	RPUSD1	99	79.333	ENSTSYG00000036934	RPUSD1	99	79.333	Carlito_syrichta
ENSOPRG00000008340	RPUSD1	99	79.276	ENSCAPG00000014219	RPUSD1	99	79.276	Cavia_aperea
ENSOPRG00000008340	RPUSD1	99	79.276	ENSCPOG00000034604	RPUSD1	99	79.276	Cavia_porcellus
ENSOPRG00000008340	RPUSD1	99	77.097	ENSCCAG00000034385	RPUSD1	99	78.065	Cebus_capucinus
ENSOPRG00000008340	RPUSD1	99	75.806	ENSCATG00000042983	RPUSD1	99	77.097	Cercocebus_atys
ENSOPRG00000008340	RPUSD1	99	77.632	ENSCLAG00000013966	RPUSD1	99	78.289	Chinchilla_lanigera
ENSOPRG00000008340	RPUSD1	99	74.286	ENSCSAG00000012121	RPUSD1	99	76.774	Chlorocebus_sabaeus
ENSOPRG00000008340	RPUSD1	99	59.539	ENSCPBG00000021101	RPUSD1	99	59.539	Chrysemys_picta_bellii
ENSOPRG00000008340	RPUSD1	93	78.700	ENSCANG00000028576	RPUSD1	99	78.700	Colobus_angolensis_palliatus
ENSOPRG00000008340	RPUSD1	99	77.409	ENSCGRG00001014253	Rpusd1	99	77.409	Cricetulus_griseus_chok1gshd
ENSOPRG00000008340	RPUSD1	99	77.409	ENSCGRG00000017995	Rpusd1	99	77.409	Cricetulus_griseus_crigri
ENSOPRG00000008340	RPUSD1	99	50.676	ENSCSEG00000018512	rpusd1	100	50.676	Cynoglossus_semilaevis
ENSOPRG00000008340	RPUSD1	98	49.667	ENSCVAG00000022746	rpusd1	98	49.667	Cyprinodon_variegatus
ENSOPRG00000008340	RPUSD1	99	56.419	ENSDARG00000060192	rpusd1	100	56.419	Danio_rerio
ENSOPRG00000008340	RPUSD1	99	73.718	ENSDNOG00000003721	RPUSD1	99	76.471	Dasypus_novemcinctus
ENSOPRG00000008340	RPUSD1	99	80.399	ENSDORG00000026656	Rpusd1	99	81.395	Dipodomys_ordii
ENSOPRG00000008340	RPUSD1	99	42.271	ENSEBUG00000008767	rpusd1	94	42.271	Eptatretus_burgeri
ENSOPRG00000008340	RPUSD1	100	73.734	ENSEASG00005018421	RPUSD1	76	74.367	Equus_asinus_asinus
ENSOPRG00000008340	RPUSD1	85	55.906	ENSELUG00000014307	rpusd1	88	50.325	Esox_lucius
ENSOPRG00000008340	RPUSD1	99	77.333	ENSFCAG00000010359	RPUSD1	99	77.333	Felis_catus
ENSOPRG00000008340	RPUSD1	99	60.265	ENSFALG00000003211	RPUSD1	100	60.265	Ficedula_albicollis
ENSOPRG00000008340	RPUSD1	99	78.289	ENSFDAG00000013398	RPUSD1	99	78.289	Fukomys_damarensis
ENSOPRG00000008340	RPUSD1	98	49.175	ENSFHEG00000004736	rpusd1	98	49.175	Fundulus_heteroclitus
ENSOPRG00000008340	RPUSD1	85	55.336	ENSGMOG00000010756	rpusd1	99	49.511	Gadus_morhua
ENSOPRG00000008340	RPUSD1	99	59.150	ENSGALG00000005315	RPUSD1	100	59.150	Gallus_gallus
ENSOPRG00000008340	RPUSD1	98	51.000	ENSGAFG00000009886	rpusd1	98	51.000	Gambusia_affinis
ENSOPRG00000008340	RPUSD1	84	56.574	ENSGACG00000014276	rpusd1	97	50.825	Gasterosteus_aculeatus
ENSOPRG00000008340	RPUSD1	99	58.882	ENSGAGG00000004181	RPUSD1	99	58.882	Gopherus_agassizii
ENSOPRG00000008340	RPUSD1	99	74.516	ENSGGOG00000013997	RPUSD1	99	75.484	Gorilla_gorilla
ENSOPRG00000008340	RPUSD1	98	50.489	ENSHBUG00000023728	rpusd1	98	51.792	Haplochromis_burtoni
ENSOPRG00000008340	RPUSD1	99	77.303	ENSHGLG00000002595	RPUSD1	99	78.289	Heterocephalus_glaber_female
ENSOPRG00000008340	RPUSD1	99	77.303	ENSHGLG00100014303	RPUSD1	99	78.289	Heterocephalus_glaber_male
ENSOPRG00000008340	RPUSD1	98	53.401	ENSHCOG00000002390	rpusd1	99	53.401	Hippocampus_comes
ENSOPRG00000008340	RPUSD1	99	55.776	ENSIPUG00000001570	rpusd1	99	55.776	Ictalurus_punctatus
ENSOPRG00000008340	RPUSD1	99	80.263	ENSSTOG00000004276	RPUSD1	99	80.263	Ictidomys_tridecemlineatus
ENSOPRG00000008340	RPUSD1	99	78.477	ENSJJAG00000015696	Rpusd1	99	79.470	Jaculus_jaculus
ENSOPRG00000008340	RPUSD1	98	49.333	ENSKMAG00000017287	rpusd1	98	49.333	Kryptolebias_marmoratus
ENSOPRG00000008340	RPUSD1	98	50.492	ENSLBEG00000013354	RPUSD1	98	50.820	Labrus_bergylta
ENSOPRG00000008340	RPUSD1	98	50.492	ENSLBEG00000022502	rpusd1	98	50.820	Labrus_bergylta
ENSOPRG00000008340	RPUSD1	99	55.960	ENSLACG00000008869	RPUSD1	99	55.960	Latimeria_chalumnae
ENSOPRG00000008340	RPUSD1	72	65.741	ENSLOCG00000005682	rpusd1	99	65.741	Lepisosteus_oculatus
ENSOPRG00000008340	RPUSD1	99	75.000	ENSLAFG00000002115	RPUSD1	99	75.000	Loxodonta_africana
ENSOPRG00000008340	RPUSD1	99	76.129	ENSMFAG00000003961	RPUSD1	99	77.097	Macaca_fascicularis
ENSOPRG00000008340	RPUSD1	99	76.129	ENSMMUG00000000842	RPUSD1	99	77.097	Macaca_mulatta
ENSOPRG00000008340	RPUSD1	99	76.129	ENSMNEG00000042712	RPUSD1	99	77.097	Macaca_nemestrina
ENSOPRG00000008340	RPUSD1	99	76.129	ENSMLEG00000030591	RPUSD1	99	77.097	Mandrillus_leucophaeus
ENSOPRG00000008340	RPUSD1	98	50.654	ENSMAMG00000004735	rpusd1	98	50.654	Mastacembelus_armatus
ENSOPRG00000008340	RPUSD1	98	50.814	ENSMZEG00005003214	rpusd1	98	52.117	Maylandia_zebra
ENSOPRG00000008340	RPUSD1	98	57.947	ENSMGAG00000005447	RPUSD1	100	57.947	Meleagris_gallopavo
ENSOPRG00000008340	RPUSD1	88	72.901	ENSMAUG00000019998	Rpusd1	100	72.901	Mesocricetus_auratus
ENSOPRG00000008340	RPUSD1	99	79.344	ENSMICG00000017561	RPUSD1	99	79.672	Microcebus_murinus
ENSOPRG00000008340	RPUSD1	99	77.303	ENSMOCG00000014082	Rpusd1	99	77.705	Microtus_ochrogaster
ENSOPRG00000008340	RPUSD1	82	55.918	ENSMMOG00000012569	rpusd1	99	51.195	Mola_mola
ENSOPRG00000008340	RPUSD1	99	63.518	ENSMODG00000016882	RPUSD1	99	63.844	Monodelphis_domestica
ENSOPRG00000008340	RPUSD1	98	51.307	ENSMALG00000017818	rpusd1	98	51.307	Monopterus_albus
ENSOPRG00000008340	RPUSD1	99	77.303	MGP_CAROLIEiJ_G0021244	Rpusd1	99	77.303	Mus_caroli
ENSOPRG00000008340	RPUSD1	99	77.961	ENSMUSG00000041199	Rpusd1	99	77.961	Mus_musculus
ENSOPRG00000008340	RPUSD1	99	76.393	MGP_PahariEiJ_G0023562	Rpusd1	99	77.049	Mus_pahari
ENSOPRG00000008340	RPUSD1	99	77.961	MGP_SPRETEiJ_G0022155	Rpusd1	99	77.961	Mus_spretus
ENSOPRG00000008340	RPUSD1	99	75.667	ENSMPUG00000015897	RPUSD1	99	77.000	Mustela_putorius_furo
ENSOPRG00000008340	RPUSD1	99	73.651	ENSMLUG00000001089	RPUSD1	99	76.375	Myotis_lucifugus
ENSOPRG00000008340	RPUSD1	99	76.645	ENSNGAG00000003595	Rpusd1	99	77.303	Nannospalax_galili
ENSOPRG00000008340	RPUSD1	98	52.381	ENSNBRG00000006457	rpusd1	98	52.381	Neolamprologus_brichardi
ENSOPRG00000008340	RPUSD1	53	66.857	ENSNLEG00000008424	-	99	68.208	Nomascus_leucogenys
ENSOPRG00000008340	RPUSD1	99	64.784	ENSMEUG00000016049	RPUSD1	99	64.784	Notamacropus_eugenii
ENSOPRG00000008340	RPUSD1	99	77.303	ENSODEG00000016945	RPUSD1	99	77.303	Octodon_degus
ENSOPRG00000008340	RPUSD1	98	49.837	ENSONIG00000015672	rpusd1	99	51.140	Oreochromis_niloticus
ENSOPRG00000008340	RPUSD1	99	52.980	ENSORLG00000013009	rpusd1	99	52.980	Oryzias_latipes
ENSOPRG00000008340	RPUSD1	99	51.987	ENSORLG00020010382	rpusd1	99	51.987	Oryzias_latipes_hni
ENSOPRG00000008340	RPUSD1	99	52.318	ENSORLG00015021354	rpusd1	99	52.318	Oryzias_latipes_hsok
ENSOPRG00000008340	RPUSD1	98	52.525	ENSOMEG00000021426	rpusd1	98	52.525	Oryzias_melastigma
ENSOPRG00000008340	RPUSD1	99	78.710	ENSOGAG00000003795	RPUSD1	99	78.710	Otolemur_garnettii
ENSOPRG00000008340	RPUSD1	99	75.163	ENSOARG00000014254	RPUSD1	99	75.163	Ovis_aries
ENSOPRG00000008340	RPUSD1	99	74.516	ENSPPAG00000034797	RPUSD1	99	75.484	Pan_paniscus
ENSOPRG00000008340	RPUSD1	99	77.333	ENSPPRG00000012389	RPUSD1	99	77.333	Panthera_pardus
ENSOPRG00000008340	RPUSD1	99	77.000	ENSPTIG00000008545	RPUSD1	92	77.000	Panthera_tigris_altaica
ENSOPRG00000008340	RPUSD1	99	74.516	ENSPTRG00000007565	RPUSD1	99	75.484	Pan_troglodytes
ENSOPRG00000008340	RPUSD1	99	75.484	ENSPANG00000024401	RPUSD1	99	76.452	Papio_anubis
ENSOPRG00000008340	RPUSD1	99	54.934	ENSPKIG00000018890	rpusd1	91	54.934	Paramormyrops_kingsleyae
ENSOPRG00000008340	RPUSD1	99	60.328	ENSPSIG00000013945	RPUSD1	100	60.328	Pelodiscus_sinensis
ENSOPRG00000008340	RPUSD1	99	50.508	ENSPMGG00000014950	rpusd1	99	50.508	Periophthalmus_magnuspinnatus
ENSOPRG00000008340	RPUSD1	99	77.303	ENSPEMG00000000497	Rpusd1	99	77.961	Peromyscus_maniculatus_bairdii
ENSOPRG00000008340	RPUSD1	86	51.351	ENSPMAG00000001563	rpusd1	99	47.039	Petromyzon_marinus
ENSOPRG00000008340	RPUSD1	99	64.026	ENSPCIG00000021216	-	93	64.026	Phascolarctos_cinereus
ENSOPRG00000008340	RPUSD1	98	51.171	ENSPFOG00000007946	rpusd1	98	51.171	Poecilia_formosa
ENSOPRG00000008340	RPUSD1	98	51.171	ENSPLAG00000011925	rpusd1	98	51.171	Poecilia_latipinna
ENSOPRG00000008340	RPUSD1	98	50.836	ENSPMEG00000002910	rpusd1	98	50.836	Poecilia_mexicana
ENSOPRG00000008340	RPUSD1	98	51.000	ENSPREG00000019851	rpusd1	98	51.000	Poecilia_reticulata
ENSOPRG00000008340	RPUSD1	99	62.542	ENSPCAG00000002258	RPUSD1	99	62.542	Procavia_capensis
ENSOPRG00000008340	RPUSD1	99	78.778	ENSPCOG00000022582	RPUSD1	99	79.355	Propithecus_coquereli
ENSOPRG00000008340	RPUSD1	99	73.548	ENSPVAG00000013104	RPUSD1	99	73.871	Pteropus_vampyrus
ENSOPRG00000008340	RPUSD1	98	52.055	ENSPNYG00000024076	rpusd1	98	52.740	Pundamilia_nyererei
ENSOPRG00000008340	RPUSD1	99	51.171	ENSPNAG00000013806	rpusd1	100	51.171	Pygocentrus_nattereri
ENSOPRG00000008340	RPUSD1	99	77.303	ENSRNOG00000023639	Rpusd1	99	77.303	Rattus_norvegicus
ENSOPRG00000008340	RPUSD1	99	75.806	ENSRBIG00000030238	RPUSD1	99	76.774	Rhinopithecus_bieti
ENSOPRG00000008340	RPUSD1	99	75.806	ENSRROG00000036663	RPUSD1	99	76.774	Rhinopithecus_roxellana
ENSOPRG00000008340	RPUSD1	99	79.000	ENSSBOG00000033063	RPUSD1	99	80.333	Saimiri_boliviensis_boliviensis
ENSOPRG00000008340	RPUSD1	99	64.026	ENSSHAG00000013500	RPUSD1	99	64.026	Sarcophilus_harrisii
ENSOPRG00000008340	RPUSD1	99	55.814	ENSSFOG00015014394	rpusd1	99	55.814	Scleropages_formosus
ENSOPRG00000008340	RPUSD1	98	49.515	ENSSMAG00000008045	rpusd1	91	50.162	Scophthalmus_maximus
ENSOPRG00000008340	RPUSD1	85	58.498	ENSSDUG00000001829	rpusd1	95	52.787	Seriola_dumerili
ENSOPRG00000008340	RPUSD1	85	58.498	ENSSLDG00000020853	rpusd1	95	52.787	Seriola_lalandi_dorsalis
ENSOPRG00000008340	RPUSD1	56	76.048	ENSSARG00000011187	-	100	76.048	Sorex_araneus
ENSOPRG00000008340	RPUSD1	62	42.188	ENSSPUG00000005119	-	100	42.188	Sphenodon_punctatus
ENSOPRG00000008340	RPUSD1	98	51.148	ENSSPAG00000012708	rpusd1	98	51.307	Stegastes_partitus
ENSOPRG00000008340	RPUSD1	99	74.516	ENSSSCG00000008000	RPUSD1	98	79.134	Sus_scrofa
ENSOPRG00000008340	RPUSD1	85	65.882	ENSTGUG00000015375	RPUSD1	100	65.882	Taeniopygia_guttata
ENSOPRG00000008340	RPUSD1	98	50.980	ENSTRUG00000003041	rpusd1	98	50.980	Takifugu_rubripes
ENSOPRG00000008340	RPUSD1	98	50.171	ENSTNIG00000002660	rpusd1	99	50.171	Tetraodon_nigroviridis
ENSOPRG00000008340	RPUSD1	99	74.194	ENSTTRG00000010167	RPUSD1	99	74.516	Tursiops_truncatus
ENSOPRG00000008340	RPUSD1	99	77.000	ENSUAMG00000012736	RPUSD1	99	77.667	Ursus_americanus
ENSOPRG00000008340	RPUSD1	99	77.000	ENSUMAG00000021174	RPUSD1	99	77.667	Ursus_maritimus
ENSOPRG00000008340	RPUSD1	100	77.152	ENSVVUG00000012357	RPUSD1	100	77.152	Vulpes_vulpes
ENSOPRG00000008340	RPUSD1	99	57.616	ENSXETG00000007184	rpusd1	99	57.616	Xenopus_tropicalis
ENSOPRG00000008340	RPUSD1	98	50.000	ENSXCOG00000017930	rpusd1	98	50.000	Xiphophorus_couchianus
ENSOPRG00000008340	RPUSD1	98	50.333	ENSXMAG00000024084	rpusd1	98	50.333	Xiphophorus_maculatus