EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000008596 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 36512 bases
Position: chrGeneScaffold_1371:43444-79955
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000007889	SF3b1	PF08920.10	2.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000008619	SF3B1-201	3912	-	ENSOPRP00000007889	1303 (aa)	-	UPI0001776203

Gene Model

Click here to download ENSOPRG00000008596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000008596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000008596	SF3B1	100	88.113	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSOPRG00000008596	SF3B1	100	81.278	ENSAPOG00000011894	sf3b1	100	81.129	Acanthochromis_polyacanthus
ENSOPRG00000008596	SF3B1	99	87.963	ENSAMEG00000013809	SF3B1	99	87.963	Ailuropoda_melanoleuca
ENSOPRG00000008596	SF3B1	100	80.686	ENSACIG00000020910	sf3b1	97	80.611	Amphilophus_citrinellus
ENSOPRG00000008596	SF3B1	100	81.278	ENSAOCG00000004478	sf3b1	100	81.129	Amphiprion_ocellaris
ENSOPRG00000008596	SF3B1	100	81.278	ENSAPEG00000012937	sf3b1	100	81.129	Amphiprion_percula
ENSOPRG00000008596	SF3B1	100	81.413	ENSATEG00000020435	sf3b1	100	81.264	Anabas_testudineus
ENSOPRG00000008596	SF3B1	99	86.239	ENSAPLG00000003993	SF3B1	99	86.239	Anas_platyrhynchos
ENSOPRG00000008596	SF3B1	100	87.040	ENSACAG00000009612	SF3B1	100	87.040	Anolis_carolinensis
ENSOPRG00000008596	SF3B1	100	88.113	ENSANAG00000021577	SF3B1	100	89.637	Aotus_nancymaae
ENSOPRG00000008596	SF3B1	100	80.297	ENSACLG00000023470	sf3b1	100	80.149	Astatotilapia_calliptera
ENSOPRG00000008596	SF3B1	100	83.511	ENSAMXG00000002219	sf3b1	100	83.511	Astyanax_mexicanus
ENSOPRG00000008596	SF3B1	100	88.190	ENSBTAG00000008915	SF3B1	100	88.190	Bos_taurus
ENSOPRG00000008596	SF3B1	92	62.948	WBGene00011605	sftb-1	92	63.108	Caenorhabditis_elegans
ENSOPRG00000008596	SF3B1	100	88.113	ENSCJAG00000003902	SF3B1	100	88.113	Callithrix_jacchus
ENSOPRG00000008596	SF3B1	100	88.113	ENSCAFG00000010826	SF3B1	100	88.113	Canis_familiaris
ENSOPRG00000008596	SF3B1	100	88.113	ENSCAFG00020004750	SF3B1	100	88.113	Canis_lupus_dingo
ENSOPRG00000008596	SF3B1	100	88.190	ENSCHIG00000015226	SF3B1	100	88.190	Capra_hircus
ENSOPRG00000008596	SF3B1	100	88.037	ENSTSYG00000009214	SF3B1	100	88.037	Carlito_syrichta
ENSOPRG00000008596	SF3B1	99	87.923	ENSCAPG00000006547	SF3B1	99	87.923	Cavia_aperea
ENSOPRG00000008596	SF3B1	99	88.022	ENSCPOG00000009353	SF3B1	100	88.022	Cavia_porcellus
ENSOPRG00000008596	SF3B1	100	88.113	ENSCCAG00000020506	SF3B1	100	88.113	Cebus_capucinus
ENSOPRG00000008596	SF3B1	100	88.113	ENSCATG00000035735	SF3B1	100	88.113	Cercocebus_atys
ENSOPRG00000008596	SF3B1	99	88.031	ENSCLAG00000014767	SF3B1	99	88.031	Chinchilla_lanigera
ENSOPRG00000008596	SF3B1	100	88.113	ENSCSAG00000011505	SF3B1	100	88.113	Chlorocebus_sabaeus
ENSOPRG00000008596	SF3B1	76	98.462	ENSCHOG00000009860	SF3B1	76	98.462	Choloepus_hoffmanni
ENSOPRG00000008596	SF3B1	100	86.105	ENSCPBG00000021902	SF3B1	99	87.479	Chrysemys_picta_bellii
ENSOPRG00000008596	SF3B1	65	71.857	ENSCING00000002558	-	96	71.857	Ciona_intestinalis
ENSOPRG00000008596	SF3B1	99	71.657	ENSCSAVG00000002559	-	99	71.657	Ciona_savignyi
ENSOPRG00000008596	SF3B1	100	88.113	ENSCANG00000029415	SF3B1	100	88.113	Colobus_angolensis_palliatus
ENSOPRG00000008596	SF3B1	100	88.113	ENSCGRG00001016990	Sf3b1	100	88.113	Cricetulus_griseus_chok1gshd
ENSOPRG00000008596	SF3B1	100	88.113	ENSCGRG00000005301	Sf3b1	100	88.113	Cricetulus_griseus_crigri
ENSOPRG00000008596	SF3B1	100	77.852	ENSCSEG00000003860	sf3b1	100	77.778	Cynoglossus_semilaevis
ENSOPRG00000008596	SF3B1	96	80.989	ENSCVAG00000003680	sf3b1	99	80.835	Cyprinodon_variegatus
ENSOPRG00000008596	SF3B1	100	81.805	ENSDARG00000056138	sf3b1	100	80.758	Danio_rerio
ENSOPRG00000008596	SF3B1	100	88.046	ENSDNOG00000011754	SF3B1	100	88.046	Dasypus_novemcinctus
ENSOPRG00000008596	SF3B1	99	88.031	ENSDORG00000002399	Sf3b1	100	88.031	Dipodomys_ordii
ENSOPRG00000008596	SF3B1	100	68.406	FBgn0031266	Sf3b1	100	68.406	Drosophila_melanogaster
ENSOPRG00000008596	SF3B1	81	86.919	ENSETEG00000009188	SF3B1	98	86.919	Echinops_telfairi
ENSOPRG00000008596	SF3B1	99	79.739	ENSEBUG00000004325	sf3b1	100	82.741	Eptatretus_burgeri
ENSOPRG00000008596	SF3B1	100	88.037	ENSEASG00005020159	SF3B1	98	88.037	Equus_asinus_asinus
ENSOPRG00000008596	SF3B1	100	88.037	ENSECAG00000021657	SF3B1	98	88.037	Equus_caballus
ENSOPRG00000008596	SF3B1	85	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSOPRG00000008596	SF3B1	100	82.642	ENSELUG00000005977	sf3b1	98	82.642	Esox_lucius
ENSOPRG00000008596	SF3B1	100	88.113	ENSFCAG00000005038	SF3B1	100	88.113	Felis_catus
ENSOPRG00000008596	SF3B1	99	86.315	ENSFALG00000004281	SF3B1	99	86.315	Ficedula_albicollis
ENSOPRG00000008596	SF3B1	100	88.113	ENSFDAG00000017510	SF3B1	100	88.113	Fukomys_damarensis
ENSOPRG00000008596	SF3B1	100	80.906	ENSFHEG00000014333	sf3b1	100	80.609	Fundulus_heteroclitus
ENSOPRG00000008596	SF3B1	100	80.938	ENSGMOG00000006773	sf3b1	100	80.864	Gadus_morhua
ENSOPRG00000008596	SF3B1	100	86.333	ENSGALG00000008038	SF3B1	100	86.333	Gallus_gallus
ENSOPRG00000008596	SF3B1	100	79.462	ENSGAFG00000000704	sf3b1	99	80.755	Gambusia_affinis
ENSOPRG00000008596	SF3B1	100	83.079	ENSGACG00000008839	sf3b1	100	83.079	Gasterosteus_aculeatus
ENSOPRG00000008596	SF3B1	100	85.520	ENSGAGG00000017478	SF3B1	100	85.520	Gopherus_agassizii
ENSOPRG00000008596	SF3B1	94	93.214	ENSGGOG00000009264	SF3B1	96	93.214	Gorilla_gorilla
ENSOPRG00000008596	SF3B1	99	80.343	ENSHBUG00000007705	sf3b1	99	80.194	Haplochromis_burtoni
ENSOPRG00000008596	SF3B1	99	88.031	ENSHGLG00000008285	-	99	88.031	Heterocephalus_glaber_female
ENSOPRG00000008596	SF3B1	99	86.023	ENSHGLG00100005535	-	99	86.023	Heterocephalus_glaber_male
ENSOPRG00000008596	SF3B1	100	80.710	ENSHCOG00000016775	sf3b1	100	80.562	Hippocampus_comes
ENSOPRG00000008596	SF3B1	100	82.167	ENSIPUG00000013171	sf3b1	100	81.989	Ictalurus_punctatus
ENSOPRG00000008596	SF3B1	100	88.113	ENSSTOG00000011034	SF3B1	100	88.113	Ictidomys_tridecemlineatus
ENSOPRG00000008596	SF3B1	99	87.907	ENSJJAG00000010903	Sf3b1	99	87.907	Jaculus_jaculus
ENSOPRG00000008596	SF3B1	100	80.726	ENSKMAG00000004009	sf3b1	100	80.504	Kryptolebias_marmoratus
ENSOPRG00000008596	SF3B1	100	81.031	ENSLBEG00000022208	sf3b1	100	81.031	Labrus_bergylta
ENSOPRG00000008596	SF3B1	99	82.159	ENSLACG00000014832	SF3B1	99	81.934	Latimeria_chalumnae
ENSOPRG00000008596	SF3B1	100	82.169	ENSLOCG00000003899	sf3b1	100	81.366	Lepisosteus_oculatus
ENSOPRG00000008596	SF3B1	100	88.113	ENSLAFG00000001956	SF3B1	100	88.113	Loxodonta_africana
ENSOPRG00000008596	SF3B1	99	88.031	ENSMMUG00000022430	SF3B1	99	88.031	Macaca_mulatta
ENSOPRG00000008596	SF3B1	100	88.113	ENSMNEG00000042333	SF3B1	100	89.637	Macaca_nemestrina
ENSOPRG00000008596	SF3B1	88	93.214	ENSMLEG00000026141	SF3B1	96	83.306	Mandrillus_leucophaeus
ENSOPRG00000008596	SF3B1	100	81.418	ENSMAMG00000010241	sf3b1	100	81.418	Mastacembelus_armatus
ENSOPRG00000008596	SF3B1	100	80.297	ENSMZEG00005021254	sf3b1	100	80.149	Maylandia_zebra
ENSOPRG00000008596	SF3B1	99	85.627	ENSMGAG00000007017	SF3B1	99	85.627	Meleagris_gallopavo
ENSOPRG00000008596	SF3B1	99	83.784	ENSMAUG00000009071	Sf3b1	99	83.784	Mesocricetus_auratus
ENSOPRG00000008596	SF3B1	100	88.037	ENSMICG00000013879	SF3B1	100	88.037	Microcebus_murinus
ENSOPRG00000008596	SF3B1	99	83.565	ENSMOCG00000000455	Sf3b1	99	83.565	Microtus_ochrogaster
ENSOPRG00000008596	SF3B1	82	80.091	ENSMMOG00000000475	sf3b1	98	80.091	Mola_mola
ENSOPRG00000008596	SF3B1	100	87.730	ENSMODG00000012275	SF3B1	100	87.730	Monodelphis_domestica
ENSOPRG00000008596	SF3B1	100	81.338	ENSMALG00000017211	sf3b1	100	81.115	Monopterus_albus
ENSOPRG00000008596	SF3B1	100	88.113	MGP_CAROLIEiJ_G0014141	Sf3b1	100	88.113	Mus_caroli
ENSOPRG00000008596	SF3B1	100	88.113	ENSMUSG00000025982	Sf3b1	100	88.113	Mus_musculus
ENSOPRG00000008596	SF3B1	100	88.113	MGP_SPRETEiJ_G0014947	Sf3b1	100	88.113	Mus_spretus
ENSOPRG00000008596	SF3B1	100	88.113	ENSMPUG00000007799	SF3B1	100	88.113	Mustela_putorius_furo
ENSOPRG00000008596	SF3B1	100	86.887	ENSMLUG00000000840	SF3B1	100	86.887	Myotis_lucifugus
ENSOPRG00000008596	SF3B1	99	87.769	ENSNGAG00000021884	-	100	87.769	Nannospalax_galili
ENSOPRG00000008596	SF3B1	100	77.541	ENSNBRG00000015816	sf3b1	100	77.467	Neolamprologus_brichardi
ENSOPRG00000008596	SF3B1	100	88.113	ENSNLEG00000006861	SF3B1	100	88.113	Nomascus_leucogenys
ENSOPRG00000008596	SF3B1	62	100.000	ENSMEUG00000015848	-	61	100.000	Notamacropus_eugenii
ENSOPRG00000008596	SF3B1	100	88.113	ENSODEG00000011153	-	100	88.113	Octodon_degus
ENSOPRG00000008596	SF3B1	100	80.297	ENSONIG00000013758	sf3b1	100	80.149	Oreochromis_niloticus
ENSOPRG00000008596	SF3B1	83	88.100	ENSOCUG00000012722	-	96	88.100	Oryctolagus_cuniculus
ENSOPRG00000008596	SF3B1	100	81.041	ENSORLG00000020219	sf3b1	100	80.892	Oryzias_latipes
ENSOPRG00000008596	SF3B1	100	81.041	ENSORLG00020001746	sf3b1	100	80.892	Oryzias_latipes_hni
ENSOPRG00000008596	SF3B1	61	79.630	ENSORLG00015001759	sf3b1	93	78.329	Oryzias_latipes_hsok
ENSOPRG00000008596	SF3B1	100	81.129	ENSOMEG00000019231	sf3b1	100	80.981	Oryzias_melastigma
ENSOPRG00000008596	SF3B1	100	88.190	ENSOARG00000015374	SF3B1	100	88.190	Ovis_aries
ENSOPRG00000008596	SF3B1	100	88.113	ENSPPAG00000035007	SF3B1	100	88.113	Pan_paniscus
ENSOPRG00000008596	SF3B1	100	88.113	ENSPPRG00000009090	SF3B1	100	88.113	Panthera_pardus
ENSOPRG00000008596	SF3B1	100	88.113	ENSPTIG00000021557	SF3B1	100	88.113	Panthera_tigris_altaica
ENSOPRG00000008596	SF3B1	99	81.678	ENSPTRG00000012771	SF3B1	99	81.678	Pan_troglodytes
ENSOPRG00000008596	SF3B1	100	88.113	ENSPANG00000013417	SF3B1	100	88.113	Papio_anubis
ENSOPRG00000008596	SF3B1	100	84.323	ENSPKIG00000000784	sf3b1	100	84.323	Paramormyrops_kingsleyae
ENSOPRG00000008596	SF3B1	99	84.774	ENSPSIG00000017222	SF3B1	98	84.798	Pelodiscus_sinensis
ENSOPRG00000008596	SF3B1	90	80.263	ENSPMGG00000004330	sf3b1	99	80.263	Periophthalmus_magnuspinnatus
ENSOPRG00000008596	SF3B1	99	88.031	ENSPEMG00000010699	Sf3b1	100	88.031	Peromyscus_maniculatus_bairdii
ENSOPRG00000008596	SF3B1	100	78.826	ENSPMAG00000001311	sf3b1	100	78.752	Petromyzon_marinus
ENSOPRG00000008596	SF3B1	100	87.653	ENSPCIG00000010642	SF3B1	100	87.653	Phascolarctos_cinereus
ENSOPRG00000008596	SF3B1	100	81.055	ENSPFOG00000000073	sf3b1	100	80.906	Poecilia_formosa
ENSOPRG00000008596	SF3B1	100	81.055	ENSPLAG00000002293	sf3b1	100	80.906	Poecilia_latipinna
ENSOPRG00000008596	SF3B1	100	81.055	ENSPMEG00000000446	sf3b1	98	80.906	Poecilia_mexicana
ENSOPRG00000008596	SF3B1	100	81.129	ENSPREG00000019652	sf3b1	100	80.981	Poecilia_reticulata
ENSOPRG00000008596	SF3B1	88	100.000	ENSPPYG00000013044	SF3B1	100	100.000	Pongo_abelii
ENSOPRG00000008596	SF3B1	100	87.960	ENSPCAG00000009292	SF3B1	100	87.960	Procavia_capensis
ENSOPRG00000008596	SF3B1	100	88.037	ENSPCOG00000024074	SF3B1	100	88.037	Propithecus_coquereli
ENSOPRG00000008596	SF3B1	100	88.113	ENSPVAG00000008302	SF3B1	100	88.113	Pteropus_vampyrus
ENSOPRG00000008596	SF3B1	100	80.223	ENSPNYG00000014939	sf3b1	100	80.074	Pundamilia_nyererei
ENSOPRG00000008596	SF3B1	100	83.435	ENSPNAG00000008288	sf3b1	100	83.435	Pygocentrus_nattereri
ENSOPRG00000008596	SF3B1	100	88.113	ENSRNOG00000013516	Sf3b1	100	88.113	Rattus_norvegicus
ENSOPRG00000008596	SF3B1	99	87.020	ENSRBIG00000026096	SF3B1	100	87.020	Rhinopithecus_bieti
ENSOPRG00000008596	SF3B1	100	88.113	ENSRROG00000031308	SF3B1	100	88.113	Rhinopithecus_roxellana
ENSOPRG00000008596	SF3B1	100	88.113	ENSSBOG00000020080	SF3B1	100	88.113	Saimiri_boliviensis_boliviensis
ENSOPRG00000008596	SF3B1	100	87.730	ENSSHAG00000017564	SF3B1	100	87.730	Sarcophilus_harrisii
ENSOPRG00000008596	SF3B1	100	82.932	ENSSFOG00015021535	sf3b1	100	81.872	Scleropages_formosus
ENSOPRG00000008596	SF3B1	99	80.578	ENSSMAG00000013977	sf3b1	99	80.282	Scophthalmus_maximus
ENSOPRG00000008596	SF3B1	100	81.041	ENSSDUG00000017422	sf3b1	100	80.818	Seriola_dumerili
ENSOPRG00000008596	SF3B1	100	80.967	ENSSLDG00000019495	sf3b1	100	80.743	Seriola_lalandi_dorsalis
ENSOPRG00000008596	SF3B1	73	100.000	ENSSARG00000007016	SF3B1	73	100.000	Sorex_araneus
ENSOPRG00000008596	SF3B1	100	85.953	ENSSPUG00000000410	SF3B1	100	85.953	Sphenodon_punctatus
ENSOPRG00000008596	SF3B1	100	81.264	ENSSPAG00000010451	sf3b1	99	81.115	Stegastes_partitus
ENSOPRG00000008596	SF3B1	89	89.637	ENSSSCG00000016075	SF3B1	100	89.637	Sus_scrofa
ENSOPRG00000008596	SF3B1	100	86.257	ENSTGUG00000010553	SF3B1	100	86.257	Taeniopygia_guttata
ENSOPRG00000008596	SF3B1	100	80.892	ENSTRUG00000015534	sf3b1	100	80.743	Takifugu_rubripes
ENSOPRG00000008596	SF3B1	85	87.590	ENSTBEG00000008714	SF3B1	93	87.590	Tupaia_belangeri
ENSOPRG00000008596	SF3B1	92	87.167	ENSTTRG00000003414	SF3B1	92	87.167	Tursiops_truncatus
ENSOPRG00000008596	SF3B1	83	94.926	ENSUAMG00000018506	SF3B1	97	94.926	Ursus_americanus
ENSOPRG00000008596	SF3B1	100	88.113	ENSUMAG00000020945	SF3B1	100	88.113	Ursus_maritimus
ENSOPRG00000008596	SF3B1	90	92.992	ENSVPAG00000005798	SF3B1	90	92.992	Vicugna_pacos
ENSOPRG00000008596	SF3B1	100	88.113	ENSVVUG00000025948	SF3B1	95	88.113	Vulpes_vulpes
ENSOPRG00000008596	SF3B1	100	85.441	ENSXETG00000013339	sf3b1	100	85.441	Xenopus_tropicalis
ENSOPRG00000008596	SF3B1	100	81.326	ENSXCOG00000018086	sf3b1	100	81.479	Xiphophorus_couchianus
ENSOPRG00000008596	SF3B1	100	81.055	ENSXMAG00000007369	sf3b1	100	81.038	Xiphophorus_maculatus