EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000008680 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 12307 bases
Position: chrGeneScaffold_1955:90657-102963
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000007941	zf-C2H2	PF00096.26	3.7e-13	1	2
ENSOPRP00000007941	zf-C2H2	PF00096.26	3.7e-13	2	2
ENSOPRP00000007941	zf-met	PF12874.7	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000008676	PRDM12-201	990	-	ENSOPRP00000007941	330 (aa)	-	UPI00017774FF

Gene Model

Click here to download ENSOPRG00000008680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000008680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000008680	PRDM12	100	97.879	ENSG00000130711	PRDM12	90	97.879	Homo_sapiens
ENSOPRG00000008680	PRDM12	98	67.692	ENSAPOG00000018234	-	93	66.279	Acanthochromis_polyacanthus
ENSOPRG00000008680	PRDM12	98	80.580	ENSAPOG00000016051	prdm12b	90	80.580	Acanthochromis_polyacanthus
ENSOPRG00000008680	PRDM12	98	94.118	ENSAMEG00000016234	PRDM12	99	94.118	Ailuropoda_melanoleuca
ENSOPRG00000008680	PRDM12	99	80.233	ENSACIG00000019578	prdm12b	90	81.471	Amphilophus_citrinellus
ENSOPRG00000008680	PRDM12	98	80.000	ENSACIG00000005193	-	91	80.000	Amphilophus_citrinellus
ENSOPRG00000008680	PRDM12	98	82.111	ENSAOCG00000015040	prdm12b	90	82.111	Amphiprion_ocellaris
ENSOPRG00000008680	PRDM12	98	78.869	ENSAPEG00000022849	-	88	77.941	Amphiprion_percula
ENSOPRG00000008680	PRDM12	98	82.840	ENSAPEG00000015092	prdm12b	90	82.840	Amphiprion_percula
ENSOPRG00000008680	PRDM12	98	81.763	ENSATEG00000014595	-	96	81.763	Anabas_testudineus
ENSOPRG00000008680	PRDM12	100	98.182	ENSANAG00000020616	PRDM12	97	98.182	Aotus_nancymaae
ENSOPRG00000008680	PRDM12	99	83.082	ENSACLG00000011876	prdm12b	91	83.082	Astatotilapia_calliptera
ENSOPRG00000008680	PRDM12	98	80.994	ENSACLG00000007631	-	87	81.287	Astatotilapia_calliptera
ENSOPRG00000008680	PRDM12	99	83.742	ENSAMXG00000008540	PRDM12	90	83.742	Astyanax_mexicanus
ENSOPRG00000008680	PRDM12	99	87.425	ENSAMXG00000033665	prdm12b	90	87.725	Astyanax_mexicanus
ENSOPRG00000008680	PRDM12	100	98.485	ENSBTAG00000023797	PRDM12	91	98.485	Bos_taurus
ENSOPRG00000008680	PRDM12	100	98.182	ENSCJAG00000020540	PRDM12	92	98.182	Callithrix_jacchus
ENSOPRG00000008680	PRDM12	87	97.561	ENSCAFG00000023076	PRDM12	89	97.561	Canis_familiaris
ENSOPRG00000008680	PRDM12	100	98.788	ENSCAFG00020024046	PRDM12	91	98.788	Canis_lupus_dingo
ENSOPRG00000008680	PRDM12	100	98.788	ENSCHIG00000025005	PRDM12	91	98.788	Capra_hircus
ENSOPRG00000008680	PRDM12	95	96.805	ENSCPOG00000005901	PRDM12	95	96.805	Cavia_porcellus
ENSOPRG00000008680	PRDM12	100	98.182	ENSCCAG00000037485	PRDM12	91	98.182	Cebus_capucinus
ENSOPRG00000008680	PRDM12	100	98.182	ENSCATG00000020327	PRDM12	91	98.182	Cercocebus_atys
ENSOPRG00000008680	PRDM12	100	96.970	ENSCLAG00000005499	PRDM12	90	96.970	Chinchilla_lanigera
ENSOPRG00000008680	PRDM12	100	98.182	ENSCSAG00000014756	PRDM12	91	98.182	Chlorocebus_sabaeus
ENSOPRG00000008680	PRDM12	100	92.424	ENSCPBG00000022628	PRDM12	93	92.424	Chrysemys_picta_bellii
ENSOPRG00000008680	PRDM12	100	97.879	ENSCGRG00001015005	Prdm12	90	97.879	Cricetulus_griseus_chok1gshd
ENSOPRG00000008680	PRDM12	99	77.493	ENSCVAG00000000944	-	90	77.493	Cyprinodon_variegatus
ENSOPRG00000008680	PRDM12	99	82.544	ENSCVAG00000017166	prdm12b	90	83.234	Cyprinodon_variegatus
ENSOPRG00000008680	PRDM12	98	87.234	ENSDARG00000007430	prdm12b	90	87.234	Danio_rerio
ENSOPRG00000008680	PRDM12	99	97.879	ENSDNOG00000042302	PRDM12	91	97.879	Dasypus_novemcinctus
ENSOPRG00000008680	PRDM12	98	62.108	ENSEBUG00000016780	prdm12b	78	63.533	Eptatretus_burgeri
ENSOPRG00000008680	PRDM12	100	98.788	ENSEASG00005008472	PRDM12	91	98.788	Equus_asinus_asinus
ENSOPRG00000008680	PRDM12	100	98.485	ENSECAG00000005933	PRDM12	91	98.485	Equus_caballus
ENSOPRG00000008680	PRDM12	98	83.333	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSOPRG00000008680	PRDM12	99	84.524	ENSELUG00000009905	prdm12b	91	84.524	Esox_lucius
ENSOPRG00000008680	PRDM12	100	98.788	ENSFCAG00000043086	PRDM12	91	98.788	Felis_catus
ENSOPRG00000008680	PRDM12	100	92.727	ENSFALG00000001445	PRDM12	83	92.727	Ficedula_albicollis
ENSOPRG00000008680	PRDM12	98	79.646	ENSFHEG00000007746	-	88	79.941	Fundulus_heteroclitus
ENSOPRG00000008680	PRDM12	98	82.789	ENSFHEG00000003944	prdm12b	90	83.086	Fundulus_heteroclitus
ENSOPRG00000008680	PRDM12	98	83.587	ENSGMOG00000011797	prdm12b	93	82.979	Gadus_morhua
ENSOPRG00000008680	PRDM12	100	92.727	ENSGALG00000003895	PRDM12	93	92.727	Gallus_gallus
ENSOPRG00000008680	PRDM12	99	83.036	ENSGAFG00000010827	prdm12b	90	83.036	Gambusia_affinis
ENSOPRG00000008680	PRDM12	99	83.136	ENSGACG00000016713	prdm12b	91	83.136	Gasterosteus_aculeatus
ENSOPRG00000008680	PRDM12	100	92.727	ENSGAGG00000014083	PRDM12	93	92.727	Gopherus_agassizii
ENSOPRG00000008680	PRDM12	100	97.576	ENSGGOG00000010568	PRDM12	90	97.576	Gorilla_gorilla
ENSOPRG00000008680	PRDM12	98	80.994	ENSHBUG00000022537	-	80	81.287	Haplochromis_burtoni
ENSOPRG00000008680	PRDM12	99	81.287	ENSHBUG00000022878	prdm12b	91	81.287	Haplochromis_burtoni
ENSOPRG00000008680	PRDM12	100	96.970	ENSHGLG00000013939	PRDM12	90	96.970	Heterocephalus_glaber_female
ENSOPRG00000008680	PRDM12	98	81.579	ENSHCOG00000003663	prdm12b	88	81.214	Hippocampus_comes
ENSOPRG00000008680	PRDM12	99	76.418	ENSHCOG00000021167	-	94	76.418	Hippocampus_comes
ENSOPRG00000008680	PRDM12	98	82.317	ENSIPUG00000019544	PRDM12	90	82.317	Ictalurus_punctatus
ENSOPRG00000008680	PRDM12	99	86.527	ENSIPUG00000017053	prdm12b	91	86.527	Ictalurus_punctatus
ENSOPRG00000008680	PRDM12	100	98.182	ENSSTOG00000005986	PRDM12	86	98.182	Ictidomys_tridecemlineatus
ENSOPRG00000008680	PRDM12	100	97.879	ENSJJAG00000005424	Prdm12	100	97.879	Jaculus_jaculus
ENSOPRG00000008680	PRDM12	97	81.346	ENSKMAG00000021205	-	92	81.346	Kryptolebias_marmoratus
ENSOPRG00000008680	PRDM12	99	78.212	ENSKMAG00000016921	prdm12b	89	78.492	Kryptolebias_marmoratus
ENSOPRG00000008680	PRDM12	98	80.712	ENSLBEG00000007776	-	89	81.009	Labrus_bergylta
ENSOPRG00000008680	PRDM12	98	83.533	ENSLBEG00000017769	prdm12b	88	83.832	Labrus_bergylta
ENSOPRG00000008680	PRDM12	99	89.362	ENSLACG00000017560	PRDM12	93	89.362	Latimeria_chalumnae
ENSOPRG00000008680	PRDM12	98	87.730	ENSLOCG00000005429	prdm12b	90	88.037	Lepisosteus_oculatus
ENSOPRG00000008680	PRDM12	100	97.024	ENSLAFG00000006979	PRDM12	90	97.024	Loxodonta_africana
ENSOPRG00000008680	PRDM12	100	98.182	ENSMFAG00000040322	PRDM12	90	98.182	Macaca_fascicularis
ENSOPRG00000008680	PRDM12	100	98.182	ENSMNEG00000037234	PRDM12	91	98.182	Macaca_nemestrina
ENSOPRG00000008680	PRDM12	99	82.111	ENSMAMG00000013212	prdm12b	90	83.086	Mastacembelus_armatus
ENSOPRG00000008680	PRDM12	98	80.655	ENSMAMG00000018988	-	86	80.655	Mastacembelus_armatus
ENSOPRG00000008680	PRDM12	98	80.994	ENSMZEG00005000415	PRDM12	86	81.287	Maylandia_zebra
ENSOPRG00000008680	PRDM12	100	92.727	ENSMGAG00000005438	PRDM12	93	92.727	Meleagris_gallopavo
ENSOPRG00000008680	PRDM12	100	97.576	ENSMAUG00000013040	Prdm12	90	97.576	Mesocricetus_auratus
ENSOPRG00000008680	PRDM12	100	98.788	ENSMICG00000015480	PRDM12	91	98.788	Microcebus_murinus
ENSOPRG00000008680	PRDM12	100	97.576	ENSMOCG00000021026	Prdm12	90	97.576	Microtus_ochrogaster
ENSOPRG00000008680	PRDM12	100	94.545	ENSMODG00000012108	PRDM12	93	94.545	Monodelphis_domestica
ENSOPRG00000008680	PRDM12	98	70.871	ENSMALG00000021901	prdm12b	88	70.871	Monopterus_albus
ENSOPRG00000008680	PRDM12	100	97.576	MGP_CAROLIEiJ_G0023414	Prdm12	90	97.576	Mus_caroli
ENSOPRG00000008680	PRDM12	100	97.576	ENSMUSG00000079466	Prdm12	90	97.576	Mus_musculus
ENSOPRG00000008680	PRDM12	100	97.576	MGP_PahariEiJ_G0024871	Prdm12	90	97.576	Mus_pahari
ENSOPRG00000008680	PRDM12	100	97.576	MGP_SPRETEiJ_G0024331	Prdm12	90	97.576	Mus_spretus
ENSOPRG00000008680	PRDM12	100	97.273	ENSNGAG00000018480	Prdm12	94	97.273	Nannospalax_galili
ENSOPRG00000008680	PRDM12	99	80.580	ENSNBRG00000006727	prdm12b	91	80.580	Neolamprologus_brichardi
ENSOPRG00000008680	PRDM12	99	76.471	ENSNBRG00000024312	-	95	76.471	Neolamprologus_brichardi
ENSOPRG00000008680	PRDM12	100	83.333	ENSMEUG00000003828	PRDM12	93	83.333	Notamacropus_eugenii
ENSOPRG00000008680	PRDM12	100	97.576	ENSODEG00000016282	PRDM12	62	97.576	Octodon_degus
ENSOPRG00000008680	PRDM12	58	96.373	ENSOANG00000001043	PRDM12	89	96.373	Ornithorhynchus_anatinus
ENSOPRG00000008680	PRDM12	92	94.098	ENSOCUG00000008241	PRDM12	98	94.098	Oryctolagus_cuniculus
ENSOPRG00000008680	PRDM12	100	80.980	ENSORLG00000007114	prdm12b	92	80.980	Oryzias_latipes
ENSOPRG00000008680	PRDM12	98	79.472	ENSORLG00000017558	-	87	80.059	Oryzias_latipes
ENSOPRG00000008680	PRDM12	100	80.692	ENSORLG00020019565	prdm12b	91	80.692	Oryzias_latipes_hni
ENSOPRG00000008680	PRDM12	98	79.240	ENSORLG00020013167	-	87	79.825	Oryzias_latipes_hni
ENSOPRG00000008680	PRDM12	100	80.403	ENSORLG00015007621	prdm12b	92	80.747	Oryzias_latipes_hsok
ENSOPRG00000008680	PRDM12	98	79.472	ENSORLG00015003435	-	87	80.059	Oryzias_latipes_hsok
ENSOPRG00000008680	PRDM12	99	78.063	ENSOMEG00000007762	-	94	78.348	Oryzias_melastigma
ENSOPRG00000008680	PRDM12	100	80.286	ENSOMEG00000004134	prdm12b	91	80.286	Oryzias_melastigma
ENSOPRG00000008680	PRDM12	100	98.788	ENSOGAG00000007557	PRDM12	99	98.788	Otolemur_garnettii
ENSOPRG00000008680	PRDM12	89	95.563	ENSPPAG00000031506	-	99	95.563	Pan_paniscus
ENSOPRG00000008680	PRDM12	100	89.728	ENSPPRG00000023024	PRDM12	85	89.728	Panthera_pardus
ENSOPRG00000008680	PRDM12	100	97.879	ENSPTRG00000043324	-	90	97.879	Pan_troglodytes
ENSOPRG00000008680	PRDM12	100	97.879	ENSPTRG00000021475	PRDM12	90	97.879	Pan_troglodytes
ENSOPRG00000008680	PRDM12	100	98.182	ENSPANG00000025967	PRDM12	91	98.182	Papio_anubis
ENSOPRG00000008680	PRDM12	99	85.546	ENSPKIG00000007228	prdm12b	91	85.546	Paramormyrops_kingsleyae
ENSOPRG00000008680	PRDM12	98	79.641	ENSPKIG00000004305	PRDM12	94	79.641	Paramormyrops_kingsleyae
ENSOPRG00000008680	PRDM12	100	91.818	ENSPSIG00000006739	PRDM12	93	91.818	Pelodiscus_sinensis
ENSOPRG00000008680	PRDM12	99	81.873	ENSPMGG00000002356	-	86	81.571	Periophthalmus_magnuspinnatus
ENSOPRG00000008680	PRDM12	99	82.840	ENSPMGG00000008867	prdm12b	91	83.136	Periophthalmus_magnuspinnatus
ENSOPRG00000008680	PRDM12	100	97.879	ENSPEMG00000009969	Prdm12	91	97.879	Peromyscus_maniculatus_bairdii
ENSOPRG00000008680	PRDM12	100	94.848	ENSPCIG00000024119	PRDM12	93	94.848	Phascolarctos_cinereus
ENSOPRG00000008680	PRDM12	99	82.647	ENSPFOG00000019841	prdm12b	92	82.647	Poecilia_formosa
ENSOPRG00000008680	PRDM12	99	83.333	ENSPLAG00000016626	prdm12b	89	83.333	Poecilia_latipinna
ENSOPRG00000008680	PRDM12	97	82.822	ENSPMEG00000016698	prdm12b	89	82.822	Poecilia_mexicana
ENSOPRG00000008680	PRDM12	99	83.186	ENSPREG00000015073	prdm12b	89	83.186	Poecilia_reticulata
ENSOPRG00000008680	PRDM12	96	77.676	ENSPREG00000003211	-	90	77.676	Poecilia_reticulata
ENSOPRG00000008680	PRDM12	100	97.879	ENSPPYG00000019694	PRDM12	94	97.879	Pongo_abelii
ENSOPRG00000008680	PRDM12	100	98.788	ENSPCOG00000022255	PRDM12	90	98.788	Propithecus_coquereli
ENSOPRG00000008680	PRDM12	100	98.485	ENSPVAG00000001511	PRDM12	90	98.485	Pteropus_vampyrus
ENSOPRG00000008680	PRDM12	98	80.994	ENSPNYG00000013589	-	86	81.287	Pundamilia_nyererei
ENSOPRG00000008680	PRDM12	99	80.523	ENSPNYG00000009607	prdm12b	91	80.523	Pundamilia_nyererei
ENSOPRG00000008680	PRDM12	98	80.606	ENSPNAG00000013396	PRDM12	88	80.606	Pygocentrus_nattereri
ENSOPRG00000008680	PRDM12	99	88.024	ENSPNAG00000024532	prdm12b	91	88.024	Pygocentrus_nattereri
ENSOPRG00000008680	PRDM12	100	97.576	ENSRNOG00000009218	Prdm12	90	97.576	Rattus_norvegicus
ENSOPRG00000008680	PRDM12	96	98.107	ENSRBIG00000042712	PRDM12	91	95.745	Rhinopithecus_bieti
ENSOPRG00000008680	PRDM12	97	98.131	ENSRROG00000043554	PRDM12	100	98.131	Rhinopithecus_roxellana
ENSOPRG00000008680	PRDM12	100	93.958	ENSSHAG00000015972	PRDM12	93	93.958	Sarcophilus_harrisii
ENSOPRG00000008680	PRDM12	99	79.487	ENSSMAG00000003754	prdm12b	90	80.057	Scophthalmus_maximus
ENSOPRG00000008680	PRDM12	98	82.875	ENSSDUG00000019071	-	90	82.875	Seriola_dumerili
ENSOPRG00000008680	PRDM12	98	80.925	ENSSDUG00000023498	prdm12b	90	80.925	Seriola_dumerili
ENSOPRG00000008680	PRDM12	98	81.341	ENSSLDG00000009557	prdm12b	90	81.633	Seriola_lalandi_dorsalis
ENSOPRG00000008680	PRDM12	98	83.742	ENSSLDG00000013562	-	93	83.742	Seriola_lalandi_dorsalis
ENSOPRG00000008680	PRDM12	100	92.121	ENSSPUG00000013424	PRDM12	93	92.121	Sphenodon_punctatus
ENSOPRG00000008680	PRDM12	98	81.579	ENSSPAG00000018824	prdm12b	90	81.579	Stegastes_partitus
ENSOPRG00000008680	PRDM12	98	72.271	ENSSPAG00000022420	-	87	74.154	Stegastes_partitus
ENSOPRG00000008680	PRDM12	100	98.788	ENSSSCG00000005703	PRDM12	91	98.788	Sus_scrofa
ENSOPRG00000008680	PRDM12	98	81.024	ENSTRUG00000013239	-	93	81.024	Takifugu_rubripes
ENSOPRG00000008680	PRDM12	98	83.735	ENSTRUG00000018659	prdm12b	90	83.735	Takifugu_rubripes
ENSOPRG00000008680	PRDM12	99	83.680	ENSTNIG00000009020	prdm12b	89	84.384	Tetraodon_nigroviridis
ENSOPRG00000008680	PRDM12	98	80.303	ENSTNIG00000005859	-	92	80.303	Tetraodon_nigroviridis
ENSOPRG00000008680	PRDM12	100	98.788	ENSUAMG00000009653	PRDM12	91	98.788	Ursus_americanus
ENSOPRG00000008680	PRDM12	100	98.788	ENSVVUG00000027662	PRDM12	79	98.788	Vulpes_vulpes
ENSOPRG00000008680	PRDM12	99	83.036	ENSXCOG00000002836	prdm12b	90	83.036	Xiphophorus_couchianus
ENSOPRG00000008680	PRDM12	99	80.000	ENSXMAG00000028012	-	88	80.000	Xiphophorus_maculatus
ENSOPRG00000008680	PRDM12	99	82.544	ENSXMAG00000005537	prdm12b	89	83.234	Xiphophorus_maculatus