EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOPRG00000008902 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Ochotona_princeps
Status
putative
Strand
Plus strand
Length
43982 bases
Position
chrGeneScaffold_2986:163820-207801
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOPRP00000008163CPSF73-100_CPF11718.81.8e-5511
ENSOPRP00000008163Beta-CaspPF10996.86.6e-1711
ENSOPRP00000008163Lactamase_BPF00753.276.8e-1911
ENSOPRP00000008163RMMBLPF07521.129.1e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOPRT00000008918CPSF3-2012055-ENSOPRP00000008163684 (aa)-UPI00017783E1
Gene Model
Click here to download ENSOPRG00000008902's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000008902's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOPRG00000008902CPSF310089.620ENSG00000119203CPSF3100100.000Homo_sapiens
ENSOPRG00000008902CPSF39976.799ENSAPOG00000022087cpsf39976.799Acanthochromis_polyacanthus
ENSOPRG00000008902CPSF37385.170ENSAPOG00000012241CPSF39085.111Acanthochromis_polyacanthus
ENSOPRG00000008902CPSF310090.205ENSAMEG00000008493CPSF310090.205Ailuropoda_melanoleuca
ENSOPRG00000008902CPSF39273.768ENSACIG00000009846cpsf39973.768Amphilophus_citrinellus
ENSOPRG00000008902CPSF39277.266ENSACIG00000023663CPSF39977.266Amphilophus_citrinellus
ENSOPRG00000008902CPSF39979.381ENSAOCG00000010077CPSF39879.381Amphiprion_ocellaris
ENSOPRG00000008902CPSF39976.799ENSAOCG00000022056cpsf39976.799Amphiprion_ocellaris
ENSOPRG00000008902CPSF39976.946ENSAPEG00000019526cpsf39976.946Amphiprion_percula
ENSOPRG00000008902CPSF39979.381ENSAPEG00000021167CPSF39879.381Amphiprion_percula
ENSOPRG00000008902CPSF39976.912ENSATEG00000003959cpsf39876.912Anabas_testudineus
ENSOPRG00000008902CPSF39974.816ENSATEG00000014525CPSF39874.816Anabas_testudineus
ENSOPRG00000008902CPSF39886.310ENSAPLG00000006941CPSF39886.310Anas_platyrhynchos
ENSOPRG00000008902CPSF39383.438ENSACAG00000001759CPSF39983.438Anolis_carolinensis
ENSOPRG00000008902CPSF310083.041ENSANAG00000031254CPSF310083.041Aotus_nancymaae
ENSOPRG00000008902CPSF39195.635ENSACLG00000014484cpsf38795.635Astatotilapia_calliptera
ENSOPRG00000008902CPSF39276.948ENSACLG00000018846CPSF39976.948Astatotilapia_calliptera
ENSOPRG00000008902CPSF39979.676ENSAMXG00000004786cpsf39879.676Astyanax_mexicanus
ENSOPRG00000008902CPSF310090.058ENSBTAG00000019735CPSF310090.058Bos_taurus
ENSOPRG00000008902CPSF39152.598WBGene00013460cpsf-38952.598Caenorhabditis_elegans
ENSOPRG00000008902CPSF310089.620ENSCJAG00000006276CPSF310089.620Callithrix_jacchus
ENSOPRG00000008902CPSF310090.205ENSCAFG00000003375CPSF39590.205Canis_familiaris
ENSOPRG00000008902CPSF39089.661ENSCAFG00020026799CPSF310089.661Canis_lupus_dingo
ENSOPRG00000008902CPSF310090.058ENSCHIG00000013973CPSF310090.058Capra_hircus
ENSOPRG00000008902CPSF310089.620ENSTSYG00000002967CPSF310089.620Carlito_syrichta
ENSOPRG00000008902CPSF39888.006ENSCAPG00000013851CPSF310088.006Cavia_aperea
ENSOPRG00000008902CPSF310088.158ENSCPOG00000011299CPSF310088.158Cavia_porcellus
ENSOPRG00000008902CPSF310089.474ENSCCAG00000036730CPSF310089.474Cebus_capucinus
ENSOPRG00000008902CPSF310087.007ENSCATG00000014770CPSF39989.329Cercocebus_atys
ENSOPRG00000008902CPSF310088.304ENSCLAG00000002727CPSF310088.304Chinchilla_lanigera
ENSOPRG00000008902CPSF38499.209ENSCSAG00000007125CPSF39199.209Chlorocebus_sabaeus
ENSOPRG00000008902CPSF386100.000ENSCHOG00000000180CPSF38561.228Choloepus_hoffmanni
ENSOPRG00000008902CPSF39987.187ENSCPBG00000014074CPSF39887.187Chrysemys_picta_bellii
ENSOPRG00000008902CPSF39960.234ENSCING00000007214-9760.234Ciona_intestinalis
ENSOPRG00000008902CPSF38499.024ENSCANG00000034435CPSF38899.024Colobus_angolensis_palliatus
ENSOPRG00000008902CPSF310089.327ENSCGRG00001013134Cpsf310089.327Cricetulus_griseus_chok1gshd
ENSOPRG00000008902CPSF310089.327ENSCGRG00000018319Cpsf310089.327Cricetulus_griseus_crigri
ENSOPRG00000008902CPSF39978.088ENSCSEG00000002021CPSF39977.399Cynoglossus_semilaevis
ENSOPRG00000008902CPSF39979.676ENSCVAG00000015067CPSF39879.676Cyprinodon_variegatus
ENSOPRG00000008902CPSF39980.707ENSDARG00000027649cpsf39880.707Danio_rerio
ENSOPRG00000008902CPSF310088.321ENSDNOG00000008940CPSF39588.321Dasypus_novemcinctus
ENSOPRG00000008902CPSF39588.940ENSDORG00000014263Cpsf310088.940Dipodomys_ordii
ENSOPRG00000008902CPSF39959.942FBgn0261065Cpsf739959.942Drosophila_melanogaster
ENSOPRG00000008902CPSF37995.575ENSETEG00000003893CPSF38395.575Echinops_telfairi
ENSOPRG00000008902CPSF39971.019ENSEBUG00000009018cpsf39871.162Eptatretus_burgeri
ENSOPRG00000008902CPSF310090.205ENSEASG00005003970CPSF310090.205Equus_asinus_asinus
ENSOPRG00000008902CPSF310090.205ENSECAG00000019911CPSF310090.205Equus_caballus
ENSOPRG00000008902CPSF310074.269ENSEEUG00000015422CPSF310074.269Erinaceus_europaeus
ENSOPRG00000008902CPSF39979.736ENSELUG00000013775cpsf39979.736Esox_lucius
ENSOPRG00000008902CPSF310090.058ENSFCAG00000007852CPSF310090.058Felis_catus
ENSOPRG00000008902CPSF39585.781ENSFALG00000006572CPSF310085.781Ficedula_albicollis
ENSOPRG00000008902CPSF39987.701ENSFDAG00000006317CPSF39987.701Fukomys_damarensis
ENSOPRG00000008902CPSF39976.799ENSFHEG00000014774cpsf39976.799Fundulus_heteroclitus
ENSOPRG00000008902CPSF39977.941ENSGMOG00000003157cpsf39877.941Gadus_morhua
ENSOPRG00000008902CPSF39985.756ENSGALG00000016424CPSF39985.756Gallus_gallus
ENSOPRG00000008902CPSF39273.248ENSGAFG00000019449cpsf39973.248Gambusia_affinis
ENSOPRG00000008902CPSF39979.412ENSGAFG00000008016CPSF39879.412Gambusia_affinis
ENSOPRG00000008902CPSF36881.156ENSGAGG00000025583CPSF39381.156Gopherus_agassizii
ENSOPRG00000008902CPSF310087.554ENSGGOG00000001757CPSF310089.134Gorilla_gorilla
ENSOPRG00000008902CPSF39977.273ENSHBUG00000001188cpsf39977.273Haplochromis_burtoni
ENSOPRG00000008902CPSF35480.270ENSHBUG00000014332CPSF39180.270Haplochromis_burtoni
ENSOPRG00000008902CPSF310087.719ENSHGLG00000000666CPSF39987.719Heterocephalus_glaber_female
ENSOPRG00000008902CPSF310087.719ENSHGLG00100007765CPSF39987.719Heterocephalus_glaber_male
ENSOPRG00000008902CPSF39977.467ENSHCOG00000015957CPSF39777.467Hippocampus_comes
ENSOPRG00000008902CPSF39976.505ENSHCOG00000007251cpsf39976.505Hippocampus_comes
ENSOPRG00000008902CPSF39978.498ENSIPUG00000023488cpsf39878.498Ictalurus_punctatus
ENSOPRG00000008902CPSF310089.912ENSSTOG00000004476CPSF310089.912Ictidomys_tridecemlineatus
ENSOPRG00000008902CPSF310088.743ENSJJAG00000023415Cpsf310088.743Jaculus_jaculus
ENSOPRG00000008902CPSF39978.940ENSKMAG00000007317CPSF39878.940Kryptolebias_marmoratus
ENSOPRG00000008902CPSF39976.065ENSKMAG00000002806cpsf39976.065Kryptolebias_marmoratus
ENSOPRG00000008902CPSF39580.093ENSLBEG00000013492CPSF39880.093Labrus_bergylta
ENSOPRG00000008902CPSF39970.925ENSLBEG00000020569cpsf39470.925Labrus_bergylta
ENSOPRG00000008902CPSF35078.466ENSLBEG00000015018-9078.466Labrus_bergylta
ENSOPRG00000008902CPSF39974.853ENSLACG00000008308CPSF39874.853Latimeria_chalumnae
ENSOPRG00000008902CPSF39980.938ENSLOCG00000016823cpsf39880.938Lepisosteus_oculatus
ENSOPRG00000008902CPSF39988.235ENSLAFG00000009467CPSF310088.235Loxodonta_africana
ENSOPRG00000008902CPSF310089.620ENSMFAG00000001339CPSF310089.620Macaca_fascicularis
ENSOPRG00000008902CPSF39589.181ENSMMUG00000018038CPSF310089.181Macaca_mulatta
ENSOPRG00000008902CPSF39199.209ENSMNEG00000039447CPSF310099.209Macaca_nemestrina
ENSOPRG00000008902CPSF310089.766ENSMLEG00000026825CPSF310089.766Mandrillus_leucophaeus
ENSOPRG00000008902CPSF39977.239ENSMAMG00000003076cpsf39977.239Mastacembelus_armatus
ENSOPRG00000008902CPSF39275.911ENSMAMG00000008835CPSF39975.911Mastacembelus_armatus
ENSOPRG00000008902CPSF39979.823ENSMZEG00005006258CPSF39879.823Maylandia_zebra
ENSOPRG00000008902CPSF39977.273ENSMZEG00005014358cpsf39977.273Maylandia_zebra
ENSOPRG00000008902CPSF39885.607ENSMGAG00000013995CPSF310085.607Meleagris_gallopavo
ENSOPRG00000008902CPSF35497.035ENSMAUG00000000166Cpsf39997.035Mesocricetus_auratus
ENSOPRG00000008902CPSF310084.357ENSMICG00000002363CPSF310084.357Microcebus_murinus
ENSOPRG00000008902CPSF310084.795ENSMOCG00000020067Cpsf310084.795Microtus_ochrogaster
ENSOPRG00000008902CPSF37954.601ENSMMOG00000011923CPSF38457.857Mola_mola
ENSOPRG00000008902CPSF39473.220ENSMMOG00000018212CPSF39873.220Mola_mola
ENSOPRG00000008902CPSF310087.554ENSMODG00000014703CPSF310087.554Monodelphis_domestica
ENSOPRG00000008902CPSF39374.335ENSMALG00000011474CPSF39974.335Monopterus_albus
ENSOPRG00000008902CPSF39977.680ENSMALG00000016416cpsf39977.680Monopterus_albus
ENSOPRG00000008902CPSF310089.035MGP_CAROLIEiJ_G0017640Cpsf310089.035Mus_caroli
ENSOPRG00000008902CPSF310089.035ENSMUSG00000054309Cpsf39699.576Mus_musculus
ENSOPRG00000008902CPSF310088.889MGP_PahariEiJ_G0029397Cpsf310088.889Mus_pahari
ENSOPRG00000008902CPSF310089.035MGP_SPRETEiJ_G0018481Cpsf310089.035Mus_spretus
ENSOPRG00000008902CPSF310089.766ENSMPUG00000013213CPSF310089.766Mustela_putorius_furo
ENSOPRG00000008902CPSF310088.905ENSMLUG00000010636CPSF310088.905Myotis_lucifugus
ENSOPRG00000008902CPSF310089.181ENSNGAG00000019836Cpsf310089.181Nannospalax_galili
ENSOPRG00000008902CPSF39276.948ENSNBRG00000010525CPSF39976.948Neolamprologus_brichardi
ENSOPRG00000008902CPSF39195.635ENSNBRG00000004770cpsf38795.635Neolamprologus_brichardi
ENSOPRG00000008902CPSF310089.620ENSNLEG00000013359CPSF310089.620Nomascus_leucogenys
ENSOPRG00000008902CPSF310073.538ENSMEUG00000013117-10073.538Notamacropus_eugenii
ENSOPRG00000008902CPSF310087.719ENSODEG00000003129CPSF310087.719Octodon_degus
ENSOPRG00000008902CPSF39977.419ENSONIG00000018812cpsf39977.419Oreochromis_niloticus
ENSOPRG00000008902CPSF38285.106ENSOANG00000008577CPSF310085.106Ornithorhynchus_anatinus
ENSOPRG00000008902CPSF310089.912ENSOCUG00000003728CPSF310089.912Oryctolagus_cuniculus
ENSOPRG00000008902CPSF39975.441ENSORLG00000018854cpsf39875.441Oryzias_latipes
ENSOPRG00000008902CPSF39975.294ENSORLG00020013331cpsf39875.294Oryzias_latipes_hni
ENSOPRG00000008902CPSF39975.441ENSORLG00015011017cpsf39875.441Oryzias_latipes_hsok
ENSOPRG00000008902CPSF39975.220ENSOMEG00000010647cpsf39475.220Oryzias_melastigma
ENSOPRG00000008902CPSF310079.678ENSOGAG00000001680CPSF310079.678Otolemur_garnettii
ENSOPRG00000008902CPSF310090.058ENSOARG00000015073CPSF310090.058Ovis_aries
ENSOPRG00000008902CPSF310089.766ENSPPAG00000042457CPSF310089.766Pan_paniscus
ENSOPRG00000008902CPSF310089.766ENSPPRG00000016790CPSF310089.766Panthera_pardus
ENSOPRG00000008902CPSF39989.853ENSPTIG00000003920CPSF310089.134Panthera_tigris_altaica
ENSOPRG00000008902CPSF310089.766ENSPTRG00000011638CPSF310089.766Pan_troglodytes
ENSOPRG00000008902CPSF310089.474ENSPANG00000016798CPSF310089.474Papio_anubis
ENSOPRG00000008902CPSF39980.910ENSPKIG00000023646cpsf39980.910Paramormyrops_kingsleyae
ENSOPRG00000008902CPSF39985.212ENSPSIG00000016144CPSF310085.212Pelodiscus_sinensis
ENSOPRG00000008902CPSF37978.189ENSPMGG00000006141-9378.189Periophthalmus_magnuspinnatus
ENSOPRG00000008902CPSF35477.838ENSPMGG00000015311CPSF39177.838Periophthalmus_magnuspinnatus
ENSOPRG00000008902CPSF310088.889ENSPEMG00000017668Cpsf310088.889Peromyscus_maniculatus_bairdii
ENSOPRG00000008902CPSF36993.651ENSPMAG00000004841cpsf38793.651Petromyzon_marinus
ENSOPRG00000008902CPSF39888.306ENSPCIG00000009823CPSF39888.344Phascolarctos_cinereus
ENSOPRG00000008902CPSF39979.265ENSPFOG00000010418-9879.265Poecilia_formosa
ENSOPRG00000008902CPSF39976.358ENSPFOG00000015922cpsf39976.358Poecilia_formosa
ENSOPRG00000008902CPSF39976.358ENSPLAG00000000882cpsf39976.358Poecilia_latipinna
ENSOPRG00000008902CPSF35479.515ENSPLAG00000021300-9179.515Poecilia_latipinna
ENSOPRG00000008902CPSF39976.505ENSPMEG00000018309cpsf39976.505Poecilia_mexicana
ENSOPRG00000008902CPSF39273.726ENSPREG00000014875cpsf39973.726Poecilia_reticulata
ENSOPRG00000008902CPSF39973.932ENSPREG00000004482CPSF39873.932Poecilia_reticulata
ENSOPRG00000008902CPSF38799.554ENSPPYG00000012666CPSF39199.554Pongo_abelii
ENSOPRG00000008902CPSF39554.378ENSPCAG00000015042CPSF310054.378Procavia_capensis
ENSOPRG00000008902CPSF38499.209ENSPCOG00000023016CPSF39399.209Propithecus_coquereli
ENSOPRG00000008902CPSF39989.898ENSPVAG00000005324CPSF39989.898Pteropus_vampyrus
ENSOPRG00000008902CPSF37980.479ENSPNYG00000021047CPSF39180.479Pundamilia_nyererei
ENSOPRG00000008902CPSF39977.273ENSPNYG00000004405cpsf39977.273Pundamilia_nyererei
ENSOPRG00000008902CPSF39978.940ENSPNAG00000023060cpsf39878.940Pygocentrus_nattereri
ENSOPRG00000008902CPSF39989.150ENSRNOG00000052418Cpsf39989.150Rattus_norvegicus
ENSOPRG00000008902CPSF310083.772ENSRBIG00000041615CPSF310083.772Rhinopithecus_bieti
ENSOPRG00000008902CPSF310089.766ENSRROG00000033792CPSF310089.766Rhinopithecus_roxellana
ENSOPRG00000008902CPSF37555.102YLR277CYSH17655.102Saccharomyces_cerevisiae
ENSOPRG00000008902CPSF39885.097ENSSBOG00000027263CPSF39785.097Saimiri_boliviensis_boliviensis
ENSOPRG00000008902CPSF310088.596ENSSHAG00000007024CPSF310088.596Sarcophilus_harrisii
ENSOPRG00000008902CPSF39980.938ENSSFOG00015002108cpsf39980.938Scleropages_formosus
ENSOPRG00000008902CPSF39578.858ENSSMAG00000020534CPSF39578.858Scophthalmus_maximus
ENSOPRG00000008902CPSF39977.647ENSSDUG00000002828cpsf39677.647Seriola_dumerili
ENSOPRG00000008902CPSF39979.529ENSSDUG00000018498CPSF39879.529Seriola_dumerili
ENSOPRG00000008902CPSF39977.647ENSSLDG00000008469cpsf39677.647Seriola_lalandi_dorsalis
ENSOPRG00000008902CPSF39979.529ENSSLDG00000005234CPSF39879.529Seriola_lalandi_dorsalis
ENSOPRG00000008902CPSF310071.930ENSSARG00000005186CPSF310071.930Sorex_araneus
ENSOPRG00000008902CPSF38999.153ENSSPUG00000015525CPSF38899.153Sphenodon_punctatus
ENSOPRG00000008902CPSF39979.234ENSSPAG00000002906CPSF39879.234Stegastes_partitus
ENSOPRG00000008902CPSF39976.946ENSSPAG00000018579cpsf39976.946Stegastes_partitus
ENSOPRG00000008902CPSF39990.176ENSSSCG00000020799CPSF39990.176Sus_scrofa
ENSOPRG00000008902CPSF39986.344ENSTGUG00000013016CPSF39986.344Taeniopygia_guttata
ENSOPRG00000008902CPSF39976.652ENSTRUG00000007030cpsf39776.652Takifugu_rubripes
ENSOPRG00000008902CPSF35471.390ENSTRUG00000013905CPSF39071.390Takifugu_rubripes
ENSOPRG00000008902CPSF38576.986ENSTBEG00000002707CPSF38576.986Tupaia_belangeri
ENSOPRG00000008902CPSF364100.000ENSTTRG00000000861CPSF364100.000Tursiops_truncatus
ENSOPRG00000008902CPSF39987.243ENSUAMG00000007535CPSF39887.243Ursus_americanus
ENSOPRG00000008902CPSF39589.799ENSUMAG00000003676CPSF310089.799Ursus_maritimus
ENSOPRG00000008902CPSF39386.120ENSVPAG00000008041CPSF310086.120Vicugna_pacos
ENSOPRG00000008902CPSF310090.205ENSVVUG00000002194CPSF310090.205Vulpes_vulpes
ENSOPRG00000008902CPSF39980.938ENSXETG00000008263cpsf39980.938Xenopus_tropicalis
ENSOPRG00000008902CPSF35479.515ENSXCOG00000000957-8779.515Xiphophorus_couchianus
ENSOPRG00000008902CPSF39976.730ENSXCOG00000019695cpsf39876.730Xiphophorus_couchianus
ENSOPRG00000008902CPSF39976.505ENSXMAG00000009784cpsf39976.505Xiphophorus_maculatus
ENSOPRG00000008902CPSF39979.265ENSXMAG00000027291CPSF39879.265Xiphophorus_maculatus

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