EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000008985 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 9426 bases
Position: chrscaffold_29685:1035-10460
Accession: 25930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000008221	PRP38	PF03371.15	4e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000008981	PRPF38A-201	720	-	ENSOPRP00000008221	240 (aa)	-	UPI0001775741

Gene Model

Click here to download ENSOPRG00000008985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000008985's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000008985	PRPF38A	100	99.583	ENSG00000134748	PRPF38A	77	99.583	Homo_sapiens
ENSOPRG00000008985	PRPF38A	92	88.688	ENSAPOG00000011652	prpf38a	74	88.158	Acanthochromis_polyacanthus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSAMEG00000009319	PRPF38A	77	99.583	Ailuropoda_melanoleuca
ENSOPRG00000008985	PRPF38A	92	86.425	ENSACIG00000012292	prpf38a	75	85.965	Amphilophus_citrinellus
ENSOPRG00000008985	PRPF38A	92	88.688	ENSAOCG00000018004	prpf38a	74	88.158	Amphiprion_ocellaris
ENSOPRG00000008985	PRPF38A	92	88.688	ENSAPEG00000021414	prpf38a	74	88.158	Amphiprion_percula
ENSOPRG00000008985	PRPF38A	92	89.140	ENSATEG00000004608	prpf38a	74	88.596	Anabas_testudineus
ENSOPRG00000008985	PRPF38A	73	97.714	ENSAPLG00000005827	PRPF38A	71	97.714	Anas_platyrhynchos
ENSOPRG00000008985	PRPF38A	96	94.372	ENSACAG00000008249	PRPF38A	73	94.323	Anolis_carolinensis
ENSOPRG00000008985	PRPF38A	100	99.583	ENSANAG00000027839	PRPF38A	77	99.583	Aotus_nancymaae
ENSOPRG00000008985	PRPF38A	96	66.383	ENSANAG00000029204	-	73	66.094	Aotus_nancymaae
ENSOPRG00000008985	PRPF38A	92	86.425	ENSACLG00000021595	prpf38a	76	85.965	Astatotilapia_calliptera
ENSOPRG00000008985	PRPF38A	92	88.688	ENSAMXG00000029274	prpf38a	73	88.158	Astyanax_mexicanus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSBTAG00000002720	PRPF38A	81	99.583	Bos_taurus
ENSOPRG00000008985	PRPF38A	81	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCJAG00000021594	PRPF38A	80	99.583	Callithrix_jacchus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCAFG00000003740	PRPF38A	77	99.583	Canis_familiaris
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCAFG00020010939	PRPF38A	77	99.583	Canis_lupus_dingo
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCHIG00000024730	PRPF38A	77	99.583	Capra_hircus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSTSYG00000009868	-	77	99.583	Carlito_syrichta
ENSOPRG00000008985	PRPF38A	82	98.477	ENSTSYG00000031994	-	70	98.477	Carlito_syrichta
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCPOG00000005079	PRPF38A	77	99.583	Cavia_porcellus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCCAG00000026502	PRPF38A	77	99.583	Cebus_capucinus
ENSOPRG00000008985	PRPF38A	95	60.262	ENSCATG00000044190	-	69	60.262	Cercocebus_atys
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCATG00000032296	PRPF38A	77	99.583	Cercocebus_atys
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCLAG00000005816	PRPF38A	77	99.583	Chinchilla_lanigera
ENSOPRG00000008985	PRPF38A	69	97.917	ENSCHOG00000008388	PRPF38A	51	97.917	Choloepus_hoffmanni
ENSOPRG00000008985	PRPF38A	100	98.333	ENSCPBG00000014791	PRPF38A	77	98.333	Chrysemys_picta_bellii
ENSOPRG00000008985	PRPF38A	89	71.362	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSOPRG00000008985	PRPF38A	100	99.583	ENSCANG00000032608	PRPF38A	80	99.583	Colobus_angolensis_palliatus
ENSOPRG00000008985	PRPF38A	100	100.000	ENSCGRG00001018502	-	77	100.000	Cricetulus_griseus_chok1gshd
ENSOPRG00000008985	PRPF38A	96	85.281	ENSCGRG00001002557	-	77	85.590	Cricetulus_griseus_chok1gshd
ENSOPRG00000008985	PRPF38A	100	100.000	ENSCGRG00000014868	Prpf38a	77	100.000	Cricetulus_griseus_crigri
ENSOPRG00000008985	PRPF38A	92	87.783	ENSCSEG00000001269	prpf38a	78	87.281	Cynoglossus_semilaevis
ENSOPRG00000008985	PRPF38A	92	90.498	ENSCVAG00000012305	prpf38a	74	89.912	Cyprinodon_variegatus
ENSOPRG00000008985	PRPF38A	92	88.235	ENSDARG00000039213	prpf38a	73	87.719	Danio_rerio
ENSOPRG00000008985	PRPF38A	100	99.583	ENSDNOG00000042326	PRPF38A	78	99.583	Dasypus_novemcinctus
ENSOPRG00000008985	PRPF38A	55	72.932	ENSDNOG00000046061	-	99	72.932	Dasypus_novemcinctus
ENSOPRG00000008985	PRPF38A	96	81.385	ENSDORG00000023857	-	67	100.000	Dipodomys_ordii
ENSOPRG00000008985	PRPF38A	99	85.356	ENSDORG00000023691	-	78	87.665	Dipodomys_ordii
ENSOPRG00000008985	PRPF38A	99	85.356	ENSDORG00000025371	-	78	87.665	Dipodomys_ordii
ENSOPRG00000008985	PRPF38A	83	75.253	FBgn0050342	Prp38	57	76.596	Drosophila_melanogaster
ENSOPRG00000008985	PRPF38A	98	80.672	ENSEBUG00000012588	prpf38a	74	81.739	Eptatretus_burgeri
ENSOPRG00000008985	PRPF38A	100	99.583	ENSEASG00005014427	PRPF38A	77	99.583	Equus_asinus_asinus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSECAG00000022628	PRPF38A	77	99.583	Equus_caballus
ENSOPRG00000008985	PRPF38A	92	86.878	ENSELUG00000021094	prpf38a	77	86.404	Esox_lucius
ENSOPRG00000008985	PRPF38A	100	99.583	ENSFCAG00000002518	PRPF38A	77	99.583	Felis_catus
ENSOPRG00000008985	PRPF38A	79	95.789	ENSFALG00000005598	-	69	95.745	Ficedula_albicollis
ENSOPRG00000008985	PRPF38A	95	89.956	ENSFALG00000003612	-	76	89.956	Ficedula_albicollis
ENSOPRG00000008985	PRPF38A	100	99.583	ENSFDAG00000011287	PRPF38A	77	99.583	Fukomys_damarensis
ENSOPRG00000008985	PRPF38A	90	89.862	ENSFHEG00000014317	prpf38a	77	89.035	Fundulus_heteroclitus
ENSOPRG00000008985	PRPF38A	69	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSOPRG00000008985	PRPF38A	100	97.917	ENSGALG00000010627	PRPF38A	77	97.917	Gallus_gallus
ENSOPRG00000008985	PRPF38A	92	90.498	ENSGAFG00000012422	prpf38a	74	89.912	Gambusia_affinis
ENSOPRG00000008985	PRPF38A	92	86.099	ENSGACG00000005423	prpf38a	74	85.652	Gasterosteus_aculeatus
ENSOPRG00000008985	PRPF38A	100	98.750	ENSGAGG00000020547	PRPF38A	77	98.750	Gopherus_agassizii
ENSOPRG00000008985	PRPF38A	100	99.583	ENSGGOG00000003940	PRPF38A	77	99.583	Gorilla_gorilla
ENSOPRG00000008985	PRPF38A	79	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSOPRG00000008985	PRPF38A	100	99.583	ENSHGLG00000000475	PRPF38A	77	99.583	Heterocephalus_glaber_female
ENSOPRG00000008985	PRPF38A	95	87.336	ENSHGLG00000007918	-	74	86.463	Heterocephalus_glaber_female
ENSOPRG00000008985	PRPF38A	95	87.336	ENSHGLG00100003928	-	74	86.463	Heterocephalus_glaber_male
ENSOPRG00000008985	PRPF38A	100	99.583	ENSHGLG00100008935	PRPF38A	77	99.583	Heterocephalus_glaber_male
ENSOPRG00000008985	PRPF38A	76	91.209	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSOPRG00000008985	PRPF38A	96	87.500	ENSIPUG00000005757	prpf38a	74	87.773	Ictalurus_punctatus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSSTOG00000015610	PRPF38A	77	99.583	Ictidomys_tridecemlineatus
ENSOPRG00000008985	PRPF38A	100	99.167	ENSJJAG00000015811	Prpf38a	77	99.167	Jaculus_jaculus
ENSOPRG00000008985	PRPF38A	92	90.045	ENSKMAG00000006588	prpf38a	74	89.474	Kryptolebias_marmoratus
ENSOPRG00000008985	PRPF38A	92	86.425	ENSLBEG00000020585	prpf38a	74	85.965	Labrus_bergylta
ENSOPRG00000008985	PRPF38A	94	90.667	ENSLACG00000011495	PRPF38A	73	90.351	Latimeria_chalumnae
ENSOPRG00000008985	PRPF38A	92	87.838	ENSLOCG00000006262	prpf38a	74	87.336	Lepisosteus_oculatus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSLAFG00000025862	PRPF38A	77	99.583	Loxodonta_africana
ENSOPRG00000008985	PRPF38A	100	99.583	ENSMFAG00000039449	PRPF38A	80	99.583	Macaca_fascicularis
ENSOPRG00000008985	PRPF38A	83	98.500	ENSMMUG00000014333	PRPF38A	72	98.500	Macaca_mulatta
ENSOPRG00000008985	PRPF38A	100	99.583	ENSMNEG00000031221	PRPF38A	77	99.583	Macaca_nemestrina
ENSOPRG00000008985	PRPF38A	96	60.606	ENSMNEG00000040242	-	69	60.699	Macaca_nemestrina
ENSOPRG00000008985	PRPF38A	100	99.583	ENSMLEG00000041105	PRPF38A	77	99.583	Mandrillus_leucophaeus
ENSOPRG00000008985	PRPF38A	92	88.235	ENSMAMG00000015431	prpf38a	77	87.719	Mastacembelus_armatus
ENSOPRG00000008985	PRPF38A	92	86.425	ENSMZEG00005017838	prpf38a	74	85.965	Maylandia_zebra
ENSOPRG00000008985	PRPF38A	100	97.917	ENSMGAG00000011176	PRPF38A	80	97.917	Meleagris_gallopavo
ENSOPRG00000008985	PRPF38A	95	95.197	ENSMAUG00000018029	-	87	95.197	Mesocricetus_auratus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSMICG00000014193	PRPF38A	77	99.583	Microcebus_murinus
ENSOPRG00000008985	PRPF38A	100	100.000	ENSMOCG00000013080	Prpf38a	77	100.000	Microtus_ochrogaster
ENSOPRG00000008985	PRPF38A	94	88.053	ENSMMOG00000016972	prpf38a	80	87.719	Mola_mola
ENSOPRG00000008985	PRPF38A	100	97.925	ENSMODG00000000644	PRPF38A	77	97.925	Monodelphis_domestica
ENSOPRG00000008985	PRPF38A	92	88.235	ENSMALG00000019363	prpf38a	72	87.719	Monopterus_albus
ENSOPRG00000008985	PRPF38A	100	98.750	MGP_CAROLIEiJ_G0026269	Prpf38a	77	98.750	Mus_caroli
ENSOPRG00000008985	PRPF38A	100	98.750	ENSMUSG00000063800	Prpf38a	77	98.750	Mus_musculus
ENSOPRG00000008985	PRPF38A	100	98.750	MGP_PahariEiJ_G0028602	Prpf38a	77	98.750	Mus_pahari
ENSOPRG00000008985	PRPF38A	100	98.750	MGP_SPRETEiJ_G0027238	Prpf38a	100	98.522	Mus_spretus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSMPUG00000006896	PRPF38A	77	99.583	Mustela_putorius_furo
ENSOPRG00000008985	PRPF38A	100	100.000	ENSNGAG00000011884	Prpf38a	78	100.000	Nannospalax_galili
ENSOPRG00000008985	PRPF38A	92	85.068	ENSNBRG00000004013	prpf38a	73	84.649	Neolamprologus_brichardi
ENSOPRG00000008985	PRPF38A	95	69.432	ENSNLEG00000012592	-	70	69.432	Nomascus_leucogenys
ENSOPRG00000008985	PRPF38A	90	99.539	ENSNLEG00000017999	PRPF38A	70	99.539	Nomascus_leucogenys
ENSOPRG00000008985	PRPF38A	95	59.825	ENSNLEG00000033398	-	64	59.825	Nomascus_leucogenys
ENSOPRG00000008985	PRPF38A	96	93.939	ENSMEUG00000003860	PRPF38A	73	93.886	Notamacropus_eugenii
ENSOPRG00000008985	PRPF38A	100	99.583	ENSODEG00000005869	PRPF38A	77	99.583	Octodon_degus
ENSOPRG00000008985	PRPF38A	92	86.878	ENSONIG00000007816	prpf38a	74	86.404	Oreochromis_niloticus
ENSOPRG00000008985	PRPF38A	96	54.077	ENSOANG00000009541	-	73	53.680	Ornithorhynchus_anatinus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSOCUG00000000963	PRPF38A	77	99.583	Oryctolagus_cuniculus
ENSOPRG00000008985	PRPF38A	92	90.498	ENSORLG00000013485	prpf38a	81	89.912	Oryzias_latipes
ENSOPRG00000008985	PRPF38A	92	90.498	ENSORLG00020002130	prpf38a	81	89.912	Oryzias_latipes_hni
ENSOPRG00000008985	PRPF38A	95	87.665	ENSORLG00015021393	prpf38a	79	87.665	Oryzias_latipes_hsok
ENSOPRG00000008985	PRPF38A	92	90.045	ENSOMEG00000016333	prpf38a	74	89.474	Oryzias_melastigma
ENSOPRG00000008985	PRPF38A	100	99.583	ENSOGAG00000005423	PRPF38A	77	99.583	Otolemur_garnettii
ENSOPRG00000008985	PRPF38A	100	99.583	ENSOARG00000005373	PRPF38A	77	99.583	Ovis_aries
ENSOPRG00000008985	PRPF38A	96	75.758	ENSPPAG00000033867	-	71	75.983	Pan_paniscus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSPPAG00000030905	PRPF38A	77	99.583	Pan_paniscus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSPPRG00000013268	PRPF38A	77	99.583	Panthera_pardus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSPTIG00000015419	PRPF38A	77	99.583	Panthera_tigris_altaica
ENSOPRG00000008985	PRPF38A	100	99.583	ENSPTRG00000000739	PRPF38A	80	99.583	Pan_troglodytes
ENSOPRG00000008985	PRPF38A	100	99.583	ENSPANG00000015483	PRPF38A	77	99.583	Papio_anubis
ENSOPRG00000008985	PRPF38A	92	86.878	ENSPKIG00000011439	prpf38a	74	86.404	Paramormyrops_kingsleyae
ENSOPRG00000008985	PRPF38A	100	97.917	ENSPSIG00000017487	PRPF38A	77	97.917	Pelodiscus_sinensis
ENSOPRG00000008985	PRPF38A	90	89.401	ENSPMGG00000021352	prpf38a	78	88.596	Periophthalmus_magnuspinnatus
ENSOPRG00000008985	PRPF38A	100	93.388	ENSPEMG00000011212	-	76	93.388	Peromyscus_maniculatus_bairdii
ENSOPRG00000008985	PRPF38A	100	100.000	ENSPEMG00000023277	-	77	100.000	Peromyscus_maniculatus_bairdii
ENSOPRG00000008985	PRPF38A	57	91.241	ENSPMAG00000005561	prpf38a	100	91.241	Petromyzon_marinus
ENSOPRG00000008985	PRPF38A	100	97.510	ENSPCIG00000022369	-	77	97.510	Phascolarctos_cinereus
ENSOPRG00000008985	PRPF38A	92	90.498	ENSPFOG00000004248	prpf38a	74	89.912	Poecilia_formosa
ENSOPRG00000008985	PRPF38A	92	90.498	ENSPLAG00000010328	prpf38a	74	89.912	Poecilia_latipinna
ENSOPRG00000008985	PRPF38A	92	90.498	ENSPMEG00000011804	prpf38a	74	89.912	Poecilia_mexicana
ENSOPRG00000008985	PRPF38A	78	94.149	ENSPREG00000002835	prpf38a	58	94.149	Poecilia_reticulata
ENSOPRG00000008985	PRPF38A	96	88.136	ENSPPYG00000001348	PRPF38A	73	88.034	Pongo_abelii
ENSOPRG00000008985	PRPF38A	100	98.750	ENSPCAG00000013328	PRPF38A	77	98.750	Procavia_capensis
ENSOPRG00000008985	PRPF38A	98	80.508	ENSPCOG00000020709	-	76	81.223	Propithecus_coquereli
ENSOPRG00000008985	PRPF38A	100	99.583	ENSPCOG00000016387	-	77	99.583	Propithecus_coquereli
ENSOPRG00000008985	PRPF38A	100	99.583	ENSPVAG00000009803	PRPF38A	77	99.583	Pteropus_vampyrus
ENSOPRG00000008985	PRPF38A	92	86.425	ENSPNYG00000005571	prpf38a	74	85.965	Pundamilia_nyererei
ENSOPRG00000008985	PRPF38A	92	88.688	ENSPNAG00000010399	prpf38a	73	88.158	Pygocentrus_nattereri
ENSOPRG00000008985	PRPF38A	100	99.583	ENSRNOG00000009451	Prpf38a	77	99.583	Rattus_norvegicus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSRBIG00000036442	PRPF38A	80	99.583	Rhinopithecus_bieti
ENSOPRG00000008985	PRPF38A	77	88.710	ENSRBIG00000034053	-	67	55.459	Rhinopithecus_bieti
ENSOPRG00000008985	PRPF38A	100	78.333	ENSRROG00000040003	-	75	79.476	Rhinopithecus_roxellana
ENSOPRG00000008985	PRPF38A	100	99.583	ENSRROG00000032788	PRPF38A	77	99.583	Rhinopithecus_roxellana
ENSOPRG00000008985	PRPF38A	77	87.097	ENSRROG00000034606	-	68	56.332	Rhinopithecus_roxellana
ENSOPRG00000008985	PRPF38A	100	99.583	ENSSBOG00000019515	PRPF38A	77	99.583	Saimiri_boliviensis_boliviensis
ENSOPRG00000008985	PRPF38A	100	78.512	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSOPRG00000008985	PRPF38A	83	96.985	ENSSHAG00000006906	-	73	96.985	Sarcophilus_harrisii
ENSOPRG00000008985	PRPF38A	92	86.036	ENSSFOG00015013572	prpf38a	74	84.716	Scleropages_formosus
ENSOPRG00000008985	PRPF38A	92	88.688	ENSSMAG00000015379	prpf38a	74	88.158	Scophthalmus_maximus
ENSOPRG00000008985	PRPF38A	92	89.140	ENSSDUG00000001324	prpf38a	74	88.596	Seriola_dumerili
ENSOPRG00000008985	PRPF38A	92	89.140	ENSSLDG00000014803	prpf38a	74	88.596	Seriola_lalandi_dorsalis
ENSOPRG00000008985	PRPF38A	100	77.083	ENSSARG00000014458	PRPF38A	77	77.083	Sorex_araneus
ENSOPRG00000008985	PRPF38A	96	94.805	ENSSPUG00000013259	PRPF38A	73	95.175	Sphenodon_punctatus
ENSOPRG00000008985	PRPF38A	92	70.588	ENSSPAG00000010449	prpf38a	71	70.614	Stegastes_partitus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSSSCG00000028288	PRPF38A	77	99.583	Sus_scrofa
ENSOPRG00000008985	PRPF38A	96	91.775	ENSTGUG00000008995	PRPF38A	73	91.703	Taeniopygia_guttata
ENSOPRG00000008985	PRPF38A	92	88.235	ENSTRUG00000003374	prpf38a	70	87.719	Takifugu_rubripes
ENSOPRG00000008985	PRPF38A	92	86.547	ENSTNIG00000005533	prpf38a	74	86.087	Tetraodon_nigroviridis
ENSOPRG00000008985	PRPF38A	100	99.583	ENSTBEG00000000725	PRPF38A	77	99.583	Tupaia_belangeri
ENSOPRG00000008985	PRPF38A	100	99.583	ENSTTRG00000016139	PRPF38A	77	99.583	Tursiops_truncatus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSUAMG00000000625	PRPF38A	77	99.583	Ursus_americanus
ENSOPRG00000008985	PRPF38A	100	99.583	ENSUMAG00000022674	PRPF38A	77	99.583	Ursus_maritimus
ENSOPRG00000008985	PRPF38A	100	99.167	ENSVPAG00000000907	PRPF38A	77	99.167	Vicugna_pacos
ENSOPRG00000008985	PRPF38A	100	99.583	ENSVVUG00000004475	PRPF38A	77	99.583	Vulpes_vulpes
ENSOPRG00000008985	PRPF38A	92	90.950	ENSXETG00000008060	prpf38a	73	90.351	Xenopus_tropicalis
ENSOPRG00000008985	PRPF38A	92	88.341	ENSXCOG00000007393	prpf38a	76	87.826	Xiphophorus_couchianus
ENSOPRG00000008985	PRPF38A	92	90.498	ENSXMAG00000026143	prpf38a	74	89.912	Xiphophorus_maculatus