EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000009225 (Gene tree)
Gene ID: -
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 13538 bases
Position: chrGeneScaffold_4227:97620-111157
Accession: 20041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000008443	zf-C2H2	PF00096.26	7.4e-39	1	7
ENSOPRP00000008443	zf-C2H2	PF00096.26	7.4e-39	2	7
ENSOPRP00000008443	zf-C2H2	PF00096.26	7.4e-39	3	7
ENSOPRP00000008443	zf-C2H2	PF00096.26	7.4e-39	4	7
ENSOPRP00000008443	zf-C2H2	PF00096.26	7.4e-39	5	7
ENSOPRP00000008443	zf-C2H2	PF00096.26	7.4e-39	6	7
ENSOPRP00000008443	zf-C2H2	PF00096.26	7.4e-39	7	7
ENSOPRP00000008443	zf-met	PF12874.7	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000009228	ZNF408-201	2001	-	ENSOPRP00000008443	666 (aa)	-	UPI0001778BC7

Gene Model

Click here to download ENSOPRG00000009225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000009225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000009225	ZNF408	50	38.869	ENSOPRG00000009545	ZNF45	77	38.869
ENSOPRG00000009225	ZNF408	55	40.000	ENSOPRG00000012709	ZNF236	59	38.372
ENSOPRG00000009225	ZNF408	52	33.149	ENSOPRG00000016125	ZNF646	57	32.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000009225	ZNF408	95	67.158	ENSG00000175213	ZNF408	99	65.315	Homo_sapiens
ENSOPRG00000009225	ZNF408	99	62.849	ENSAMEG00000006904	ZNF408	99	63.128	Ailuropoda_melanoleuca
ENSOPRG00000009225	ZNF408	95	64.853	ENSANAG00000036294	ZNF408	99	63.231	Aotus_nancymaae
ENSOPRG00000009225	ZNF408	95	66.568	ENSCJAG00000019859	ZNF408	99	64.804	Callithrix_jacchus
ENSOPRG00000009225	ZNF408	99	62.121	ENSCAFG00000009143	ZNF408	96	62.672	Canis_familiaris
ENSOPRG00000009225	ZNF408	99	62.121	ENSCAFG00020019155	ZNF408	96	62.672	Canis_lupus_dingo
ENSOPRG00000009225	ZNF408	77	65.950	ENSCHIG00000025346	ZNF408	90	65.950	Capra_hircus
ENSOPRG00000009225	ZNF408	99	64.266	ENSTSYG00000025443	ZNF408	99	64.548	Carlito_syrichta
ENSOPRG00000009225	ZNF408	95	66.914	ENSCCAG00000029472	ZNF408	99	65.401	Cebus_capucinus
ENSOPRG00000009225	ZNF408	60	91.781	ENSCHOG00000009909	ZNF408	75	91.781	Choloepus_hoffmanni
ENSOPRG00000009225	ZNF408	95	58.050	ENSCGRG00001023588	Zfp408	95	57.903	Cricetulus_griseus_chok1gshd
ENSOPRG00000009225	ZNF408	95	58.050	ENSCGRG00000017618	Zfp408	95	57.903	Cricetulus_griseus_crigri
ENSOPRG00000009225	ZNF408	95	63.166	ENSDNOG00000047669	ZNF408	94	63.018	Dasypus_novemcinctus
ENSOPRG00000009225	ZNF408	99	57.670	ENSDORG00000000387	Zfp408	99	57.709	Dipodomys_ordii
ENSOPRG00000009225	ZNF408	66	78.462	ENSETEG00000017621	-	99	55.036	Echinops_telfairi
ENSOPRG00000009225	ZNF408	99	62.188	ENSEASG00005015461	ZNF408	99	62.188	Equus_asinus_asinus
ENSOPRG00000009225	ZNF408	95	64.526	ENSECAG00000010878	ZNF408	94	64.526	Equus_caballus
ENSOPRG00000009225	ZNF408	81	68.627	ENSEEUG00000010466	ZNF408	82	68.824	Erinaceus_europaeus
ENSOPRG00000009225	ZNF408	99	63.421	ENSFCAG00000029105	ZNF408	99	63.978	Felis_catus
ENSOPRG00000009225	ZNF408	95	67.010	ENSGGOG00000010152	ZNF408	99	65.175	Gorilla_gorilla
ENSOPRG00000009225	ZNF408	86	62.359	ENSLAFG00000027848	ZNF408	99	63.328	Loxodonta_africana
ENSOPRG00000009225	ZNF408	95	65.487	ENSMICG00000045320	ZNF408	99	64.286	Microcebus_murinus
ENSOPRG00000009225	ZNF408	73	46.859	ENSMODG00000019895	-	84	47.594	Monodelphis_domestica
ENSOPRG00000009225	ZNF408	95	63.796	ENSMPUG00000005490	ZNF408	99	63.107	Mustela_putorius_furo
ENSOPRG00000009225	ZNF408	99	59.149	ENSNGAG00000000309	Zfp408	99	59.149	Nannospalax_galili
ENSOPRG00000009225	ZNF408	99	64.615	ENSNLEG00000014132	ZNF408	99	64.615	Nomascus_leucogenys
ENSOPRG00000009225	ZNF408	99	66.104	ENSOCUG00000010953	ZNF408	99	66.104	Oryctolagus_cuniculus
ENSOPRG00000009225	ZNF408	86	65.316	ENSOGAG00000034080	ZNF408	99	65.316	Otolemur_garnettii
ENSOPRG00000009225	ZNF408	95	67.158	ENSPPAG00000034993	ZNF408	99	65.315	Pan_paniscus
ENSOPRG00000009225	ZNF408	99	63.421	ENSPPRG00000016866	ZNF408	99	63.978	Panthera_pardus
ENSOPRG00000009225	ZNF408	99	62.621	ENSPTIG00000015467	ZNF408	99	63.586	Panthera_tigris_altaica
ENSOPRG00000009225	ZNF408	95	67.305	ENSPTRG00000003551	ZNF408	99	65.455	Pan_troglodytes
ENSOPRG00000009225	ZNF408	68	64.694	ENSPEMG00000016757	Zfp408	88	64.694	Peromyscus_maniculatus_bairdii
ENSOPRG00000009225	ZNF408	51	53.468	ENSPFOG00000001760	-	90	50.262	Poecilia_formosa
ENSOPRG00000009225	ZNF408	54	51.923	ENSPMEG00000021147	-	82	47.765	Poecilia_mexicana
ENSOPRG00000009225	ZNF408	99	64.965	ENSPPYG00000003318	ZNF408	99	64.888	Pongo_abelii
ENSOPRG00000009225	ZNF408	100	61.173	ENSPCAG00000014001	ZNF408	99	61.732	Procavia_capensis
ENSOPRG00000009225	ZNF408	99	64.880	ENSPCOG00000028698	ZNF408	99	65.315	Propithecus_coquereli
ENSOPRG00000009225	ZNF408	95	65.288	ENSPVAG00000015791	ZNF408	99	63.675	Pteropus_vampyrus
ENSOPRG00000009225	ZNF408	95	65.685	ENSSBOG00000033023	ZNF408	95	66.176	Saimiri_boliviensis_boliviensis
ENSOPRG00000009225	ZNF408	99	61.165	ENSSSCG00000023097	ZNF408	96	61.304	Sus_scrofa
ENSOPRG00000009225	ZNF408	73	94.595	ENSTBEG00000004260	ZNF408	70	94.595	Tupaia_belangeri
ENSOPRG00000009225	ZNF408	99	63.408	ENSUAMG00000026154	ZNF408	99	63.687	Ursus_americanus
ENSOPRG00000009225	ZNF408	99	63.497	ENSUMAG00000014405	ZNF408	99	63.497	Ursus_maritimus
ENSOPRG00000009225	ZNF408	99	61.846	ENSVVUG00000026805	ZNF408	96	62.397	Vulpes_vulpes
ENSOPRG00000009225	ZNF408	54	54.642	ENSXETG00000001980	znf408	100	53.581	Xenopus_tropicalis
ENSOPRG00000009225	ZNF408	54	52.778	ENSXCOG00000002869	-	71	52.778	Xiphophorus_couchianus
ENSOPRG00000009225	ZNF408	54	51.233	ENSXMAG00000018347	-	70	50.954	Xiphophorus_maculatus