EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000009371 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 38145 bases
Position: chrGeneScaffold_671:673443-711587
Accession: 16060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000008572	TruB_N	PF01509.18	3.8e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000009366	TRUB1-201	1035	-	ENSOPRP00000008572	344 (aa)	-	UPI0001778FB8

Gene Model

Click here to download ENSOPRG00000009371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000009371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000009371	TRUB1	99	78.917	ENSG00000165832	TRUB1	86	85.050	Homo_sapiens
ENSOPRG00000009371	TRUB1	71	67.347	ENSAPOG00000020565	trub1	93	64.259	Acanthochromis_polyacanthus
ENSOPRG00000009371	TRUB1	88	85.149	ENSAMEG00000014931	TRUB1	86	85.149	Ailuropoda_melanoleuca
ENSOPRG00000009371	TRUB1	72	63.821	ENSACIG00000003060	trub1	82	63.821	Amphilophus_citrinellus
ENSOPRG00000009371	TRUB1	71	67.347	ENSAOCG00000017188	trub1	89	67.073	Amphiprion_ocellaris
ENSOPRG00000009371	TRUB1	72	67.480	ENSAPEG00000015209	trub1	89	67.480	Amphiprion_percula
ENSOPRG00000009371	TRUB1	70	68.182	ENSATEG00000023291	trub1	87	68.182	Anabas_testudineus
ENSOPRG00000009371	TRUB1	79	73.162	ENSAPLG00000006808	TRUB1	97	73.162	Anas_platyrhynchos
ENSOPRG00000009371	TRUB1	77	71.805	ENSACAG00000009282	TRUB1	96	71.805	Anolis_carolinensis
ENSOPRG00000009371	TRUB1	87	86.000	ENSANAG00000022870	TRUB1	85	86.000	Aotus_nancymaae
ENSOPRG00000009371	TRUB1	76	64.885	ENSACLG00000000823	trub1	93	64.885	Astatotilapia_calliptera
ENSOPRG00000009371	TRUB1	76	65.517	ENSAMXG00000015845	trub1	87	65.517	Astyanax_mexicanus
ENSOPRG00000009371	TRUB1	88	85.762	ENSBTAG00000012955	TRUB1	86	85.762	Bos_taurus
ENSOPRG00000009371	TRUB1	88	86.047	ENSCJAG00000047815	TRUB1	86	86.047	Callithrix_jacchus
ENSOPRG00000009371	TRUB1	87	86.667	ENSCAFG00000011688	TRUB1	86	86.755	Canis_familiaris
ENSOPRG00000009371	TRUB1	88	86.755	ENSCAFG00020013237	TRUB1	86	86.755	Canis_lupus_dingo
ENSOPRG00000009371	TRUB1	88	86.093	ENSCHIG00000020884	TRUB1	90	86.093	Capra_hircus
ENSOPRG00000009371	TRUB1	88	86.379	ENSTSYG00000000446	TRUB1	86	86.379	Carlito_syrichta
ENSOPRG00000009371	TRUB1	74	75.494	ENSCAPG00000017088	TRUB1	99	75.494	Cavia_aperea
ENSOPRG00000009371	TRUB1	69	74.180	ENSCPOG00000040236	-	81	85.787	Cavia_porcellus
ENSOPRG00000009371	TRUB1	56	86.528	ENSCPOG00000030129	-	76	85.641	Cavia_porcellus
ENSOPRG00000009371	TRUB1	88	85.714	ENSCCAG00000028842	TRUB1	86	85.714	Cebus_capucinus
ENSOPRG00000009371	TRUB1	87	86.288	ENSCATG00000033431	TRUB1	86	86.379	Cercocebus_atys
ENSOPRG00000009371	TRUB1	69	77.459	ENSCLAG00000008664	TRUB1	81	86.294	Chinchilla_lanigera
ENSOPRG00000009371	TRUB1	87	85.953	ENSCSAG00000004891	TRUB1	86	86.047	Chlorocebus_sabaeus
ENSOPRG00000009371	TRUB1	87	72.000	ENSCHOG00000011931	TRUB1	86	72.185	Choloepus_hoffmanni
ENSOPRG00000009371	TRUB1	79	75.735	ENSCPBG00000003051	TRUB1	94	75.735	Chrysemys_picta_bellii
ENSOPRG00000009371	TRUB1	87	85.953	ENSCANG00000029445	TRUB1	86	86.047	Colobus_angolensis_palliatus
ENSOPRG00000009371	TRUB1	82	75.089	ENSCGRG00001010322	-	80	75.000	Cricetulus_griseus_chok1gshd
ENSOPRG00000009371	TRUB1	84	74.653	ENSCGRG00001016772	-	90	73.826	Cricetulus_griseus_chok1gshd
ENSOPRG00000009371	TRUB1	82	83.274	ENSCGRG00000010806	Trub1	91	82.215	Cricetulus_griseus_crigri
ENSOPRG00000009371	TRUB1	71	64.082	ENSCSEG00000011261	trub1	79	64.082	Cynoglossus_semilaevis
ENSOPRG00000009371	TRUB1	73	66.400	ENSCVAG00000008791	trub1	77	65.873	Cyprinodon_variegatus
ENSOPRG00000009371	TRUB1	79	63.100	ENSDARG00000053805	trub1	93	63.100	Danio_rerio
ENSOPRG00000009371	TRUB1	88	82.450	ENSDNOG00000001069	TRUB1	86	82.450	Dasypus_novemcinctus
ENSOPRG00000009371	TRUB1	97	81.791	ENSDORG00000010431	Trub1	87	85.762	Dipodomys_ordii
ENSOPRG00000009371	TRUB1	65	85.211	ENSETEG00000009183	TRUB1	65	81.879	Echinops_telfairi
ENSOPRG00000009371	TRUB1	87	85.333	ENSEASG00005014739	TRUB1	86	85.430	Equus_asinus_asinus
ENSOPRG00000009371	TRUB1	87	85.333	ENSECAG00000007177	TRUB1	86	85.430	Equus_caballus
ENSOPRG00000009371	TRUB1	85	75.427	ENSEEUG00000013993	TRUB1	83	74.582	Erinaceus_europaeus
ENSOPRG00000009371	TRUB1	71	68.571	ENSELUG00000000502	trub1	86	68.571	Esox_lucius
ENSOPRG00000009371	TRUB1	87	86.000	ENSFCAG00000031927	TRUB1	86	86.000	Felis_catus
ENSOPRG00000009371	TRUB1	70	73.333	ENSFALG00000002232	TRUB1	92	73.333	Ficedula_albicollis
ENSOPRG00000009371	TRUB1	57	87.310	ENSFDAG00000008140	TRUB1	81	87.310	Fukomys_damarensis
ENSOPRG00000009371	TRUB1	72	65.854	ENSFHEG00000004016	trub1	85	65.854	Fundulus_heteroclitus
ENSOPRG00000009371	TRUB1	80	71.636	ENSGALG00000009091	TRUB1	97	71.636	Gallus_gallus
ENSOPRG00000009371	TRUB1	76	61.303	ENSGAFG00000009193	trub1	89	61.868	Gambusia_affinis
ENSOPRG00000009371	TRUB1	57	67.179	ENSGACG00000015387	trub1	96	67.179	Gasterosteus_aculeatus
ENSOPRG00000009371	TRUB1	92	66.463	ENSGAGG00000009758	TRUB1	81	72.887	Gopherus_agassizii
ENSOPRG00000009371	TRUB1	99	79.656	ENSGGOG00000004583	TRUB1	86	85.714	Gorilla_gorilla
ENSOPRG00000009371	TRUB1	76	64.885	ENSHBUG00000016787	trub1	93	64.885	Haplochromis_burtoni
ENSOPRG00000009371	TRUB1	87	82.333	ENSHGLG00000015314	TRUB1	87	82.450	Heterocephalus_glaber_female
ENSOPRG00000009371	TRUB1	57	86.154	ENSHGLG00100009183	TRUB1	83	86.294	Heterocephalus_glaber_male
ENSOPRG00000009371	TRUB1	71	67.755	ENSHCOG00000017877	trub1	89	67.755	Hippocampus_comes
ENSOPRG00000009371	TRUB1	77	63.910	ENSIPUG00000017559	trub1	94	63.910	Ictalurus_punctatus
ENSOPRG00000009371	TRUB1	88	84.437	ENSSTOG00000003641	TRUB1	90	84.437	Ictidomys_tridecemlineatus
ENSOPRG00000009371	TRUB1	87	83.667	ENSJJAG00000011800	Trub1	88	83.667	Jaculus_jaculus
ENSOPRG00000009371	TRUB1	74	64.981	ENSKMAG00000006232	trub1	92	64.981	Kryptolebias_marmoratus
ENSOPRG00000009371	TRUB1	75	65.283	ENSLBEG00000026722	trub1	93	65.283	Labrus_bergylta
ENSOPRG00000009371	TRUB1	77	72.830	ENSLACG00000014885	TRUB1	89	72.830	Latimeria_chalumnae
ENSOPRG00000009371	TRUB1	86	68.136	ENSLOCG00000012979	trub1	98	68.136	Lepisosteus_oculatus
ENSOPRG00000009371	TRUB1	87	77.705	ENSLAFG00000015452	TRUB1	87	79.016	Loxodonta_africana
ENSOPRG00000009371	TRUB1	87	85.619	ENSMFAG00000031767	TRUB1	86	85.714	Macaca_fascicularis
ENSOPRG00000009371	TRUB1	87	85.953	ENSMMUG00000001902	TRUB1	86	86.047	Macaca_mulatta
ENSOPRG00000009371	TRUB1	87	81.605	ENSMNEG00000044646	TRUB1	86	81.728	Macaca_nemestrina
ENSOPRG00000009371	TRUB1	87	86.000	ENSMLEG00000042655	TRUB1	86	86.047	Mandrillus_leucophaeus
ENSOPRG00000009371	TRUB1	76	64.885	ENSMZEG00005024095	trub1	93	64.885	Maylandia_zebra
ENSOPRG00000009371	TRUB1	77	73.962	ENSMGAG00000011135	TRUB1	91	73.962	Meleagris_gallopavo
ENSOPRG00000009371	TRUB1	82	80.783	ENSMAUG00000011101	Trub1	89	80.066	Mesocricetus_auratus
ENSOPRG00000009371	TRUB1	100	78.797	ENSMICG00000016324	TRUB1	100	78.797	Microcebus_murinus
ENSOPRG00000009371	TRUB1	100	75.872	ENSMOCG00000017759	Trub1	91	81.788	Microtus_ochrogaster
ENSOPRG00000009371	TRUB1	83	78.322	ENSMODG00000009676	TRUB1	81	77.474	Monodelphis_domestica
ENSOPRG00000009371	TRUB1	100	75.581	MGP_CAROLIEiJ_G0023100	Trub1	89	79.801	Mus_caroli
ENSOPRG00000009371	TRUB1	100	75.000	ENSMUSG00000025086	Trub1	89	79.470	Mus_musculus
ENSOPRG00000009371	TRUB1	100	75.581	MGP_PahariEiJ_G0014588	Trub1	89	80.132	Mus_pahari
ENSOPRG00000009371	TRUB1	100	74.709	MGP_SPRETEiJ_G0024021	Trub1	89	79.139	Mus_spretus
ENSOPRG00000009371	TRUB1	88	87.043	ENSMPUG00000003556	TRUB1	86	87.043	Mustela_putorius_furo
ENSOPRG00000009371	TRUB1	88	84.053	ENSMLUG00000017686	TRUB1	89	84.053	Myotis_lucifugus
ENSOPRG00000009371	TRUB1	88	82.781	ENSNGAG00000018682	Trub1	87	82.781	Nannospalax_galili
ENSOPRG00000009371	TRUB1	72	67.886	ENSNBRG00000023393	trub1	88	67.886	Neolamprologus_brichardi
ENSOPRG00000009371	TRUB1	87	85.619	ENSNLEG00000016345	TRUB1	86	85.714	Nomascus_leucogenys
ENSOPRG00000009371	TRUB1	58	85.572	ENSMEUG00000006603	TRUB1	77	83.732	Notamacropus_eugenii
ENSOPRG00000009371	TRUB1	99	74.425	ENSODEG00000010854	TRUB1	86	80.268	Octodon_degus
ENSOPRG00000009371	TRUB1	72	67.480	ENSONIG00000007249	trub1	89	67.480	Oreochromis_niloticus
ENSOPRG00000009371	TRUB1	80	77.007	ENSOANG00000001556	TRUB1	90	77.007	Ornithorhynchus_anatinus
ENSOPRG00000009371	TRUB1	100	80.058	ENSOCUG00000009456	TRUB1	100	79.480	Oryctolagus_cuniculus
ENSOPRG00000009371	TRUB1	70	66.529	ENSORLG00000029719	trub1	86	66.805	Oryzias_latipes
ENSOPRG00000009371	TRUB1	70	66.942	ENSORLG00020016767	trub1	85	67.220	Oryzias_latipes_hni
ENSOPRG00000009371	TRUB1	76	64.015	ENSORLG00015014728	trub1	92	64.259	Oryzias_latipes_hsok
ENSOPRG00000009371	TRUB1	82	60.498	ENSOMEG00000014556	trub1	91	62.977	Oryzias_melastigma
ENSOPRG00000009371	TRUB1	88	87.086	ENSOGAG00000015895	TRUB1	86	87.086	Otolemur_garnettii
ENSOPRG00000009371	TRUB1	86	84.437	ENSOARG00000015591	TRUB1	87	83.388	Ovis_aries
ENSOPRG00000009371	TRUB1	99	79.487	ENSPPAG00000043645	TRUB1	86	85.714	Pan_paniscus
ENSOPRG00000009371	TRUB1	87	85.333	ENSPPRG00000007096	TRUB1	86	85.333	Panthera_pardus
ENSOPRG00000009371	TRUB1	87	85.667	ENSPTIG00000006378	TRUB1	86	85.667	Panthera_tigris_altaica
ENSOPRG00000009371	TRUB1	99	79.487	ENSPTRG00000002964	TRUB1	86	85.714	Pan_troglodytes
ENSOPRG00000009371	TRUB1	87	85.953	ENSPANG00000020712	TRUB1	86	86.047	Papio_anubis
ENSOPRG00000009371	TRUB1	79	73.162	ENSPSIG00000012877	TRUB1	93	73.162	Pelodiscus_sinensis
ENSOPRG00000009371	TRUB1	74	64.567	ENSPMGG00000000075	trub1	91	64.567	Periophthalmus_magnuspinnatus
ENSOPRG00000009371	TRUB1	100	73.837	ENSPEMG00000011156	Trub1	100	73.837	Peromyscus_maniculatus_bairdii
ENSOPRG00000009371	TRUB1	83	77.622	ENSPCIG00000009729	TRUB1	79	77.055	Phascolarctos_cinereus
ENSOPRG00000009371	TRUB1	71	65.306	ENSPFOG00000009950	trub1	90	65.306	Poecilia_formosa
ENSOPRG00000009371	TRUB1	71	65.306	ENSPLAG00000013855	trub1	92	62.738	Poecilia_latipinna
ENSOPRG00000009371	TRUB1	71	65.306	ENSPMEG00000009064	trub1	88	65.306	Poecilia_mexicana
ENSOPRG00000009371	TRUB1	71	66.122	ENSPREG00000003343	trub1	88	66.122	Poecilia_reticulata
ENSOPRG00000009371	TRUB1	94	82.515	ENSPPYG00000002676	TRUB1	86	85.382	Pongo_abelii
ENSOPRG00000009371	TRUB1	87	74.000	ENSPCAG00000008427	TRUB1	85	73.754	Procavia_capensis
ENSOPRG00000009371	TRUB1	88	81.126	ENSPCOG00000024360	TRUB1	86	81.126	Propithecus_coquereli
ENSOPRG00000009371	TRUB1	60	89.904	ENSPVAG00000007575	TRUB1	82	87.963	Pteropus_vampyrus
ENSOPRG00000009371	TRUB1	76	64.885	ENSPNYG00000018614	trub1	93	64.885	Pundamilia_nyererei
ENSOPRG00000009371	TRUB1	76	58.077	ENSPNAG00000006881	trub1	84	58.077	Pygocentrus_nattereri
ENSOPRG00000009371	TRUB1	100	76.163	ENSRNOG00000017321	Trub1	89	80.132	Rattus_norvegicus
ENSOPRG00000009371	TRUB1	87	75.667	ENSRBIG00000033423	TRUB1	85	75.748	Rhinopithecus_bieti
ENSOPRG00000009371	TRUB1	87	86.000	ENSRROG00000033902	TRUB1	86	86.047	Rhinopithecus_roxellana
ENSOPRG00000009371	TRUB1	94	83.436	ENSSBOG00000024237	TRUB1	86	86.047	Saimiri_boliviensis_boliviensis
ENSOPRG00000009371	TRUB1	74	76.172	ENSSHAG00000009346	TRUB1	86	76.172	Sarcophilus_harrisii
ENSOPRG00000009371	TRUB1	74	67.315	ENSSFOG00015022124	trub1	88	67.315	Scleropages_formosus
ENSOPRG00000009371	TRUB1	72	67.480	ENSSMAG00000001020	trub1	88	67.480	Scophthalmus_maximus
ENSOPRG00000009371	TRUB1	70	67.917	ENSSDUG00000016414	trub1	88	67.886	Seriola_dumerili
ENSOPRG00000009371	TRUB1	70	68.333	ENSSLDG00000015486	trub1	88	68.293	Seriola_lalandi_dorsalis
ENSOPRG00000009371	TRUB1	87	73.579	ENSSPUG00000001642	TRUB1	96	76.429	Sphenodon_punctatus
ENSOPRG00000009371	TRUB1	76	65.779	ENSSPAG00000001217	trub1	94	65.779	Stegastes_partitus
ENSOPRG00000009371	TRUB1	88	82.450	ENSSSCG00000010653	TRUB1	86	82.450	Sus_scrofa
ENSOPRG00000009371	TRUB1	78	72.963	ENSTGUG00000010971	TRUB1	99	71.429	Taeniopygia_guttata
ENSOPRG00000009371	TRUB1	74	72.332	ENSTBEG00000002880	TRUB1	99	72.332	Tupaia_belangeri
ENSOPRG00000009371	TRUB1	63	88.426	ENSTTRG00000005767	TRUB1	100	79.008	Tursiops_truncatus
ENSOPRG00000009371	TRUB1	88	87.375	ENSUAMG00000024876	TRUB1	86	87.375	Ursus_americanus
ENSOPRG00000009371	TRUB1	85	87.755	ENSUMAG00000002411	TRUB1	87	87.755	Ursus_maritimus
ENSOPRG00000009371	TRUB1	88	86.093	ENSVPAG00000005507	TRUB1	86	86.093	Vicugna_pacos
ENSOPRG00000009371	TRUB1	87	86.913	ENSVVUG00000010085	TRUB1	73	86.755	Vulpes_vulpes
ENSOPRG00000009371	TRUB1	79	64.207	ENSXETG00000023828	trub1	98	64.207	Xenopus_tropicalis
ENSOPRG00000009371	TRUB1	75	62.548	ENSXCOG00000017847	trub1	86	64.609	Xiphophorus_couchianus
ENSOPRG00000009371	TRUB1	71	64.490	ENSXMAG00000014701	trub1	88	64.490	Xiphophorus_maculatus