EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000009508 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 3558 bases
Position: chrscaffold_31560:2537-6094
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000008688	APOBEC_N	PF08210.11	3.1e-28	1	1
ENSOPRP00000008688	APOBEC_C	PF05240.14	3.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000009503	-	534	-	ENSOPRP00000008688	178 (aa)	-	UPI000177569C

Gene Model

Click here to download ENSOPRG00000009508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000009508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000009508	-	70	38.462	ENSOPRG00000013486	AICDA	66	38.462
ENSOPRG00000009508	-	70	33.582	ENSOPRG00000002326	-	72	33.582

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000009508	-	100	62.431	ENSG00000111701	APOBEC1	77	62.431	Homo_sapiens
ENSOPRG00000009508	-	100	62.222	ENSAMEG00000007098	APOBEC1	77	62.222	Ailuropoda_melanoleuca
ENSOPRG00000009508	-	94	37.647	ENSACAG00000028578	-	93	37.647	Anolis_carolinensis
ENSOPRG00000009508	-	100	64.088	ENSANAG00000027743	APOBEC1	73	64.088	Aotus_nancymaae
ENSOPRG00000009508	-	100	59.669	ENSBTAG00000014683	APOBEC1	77	59.669	Bos_taurus
ENSOPRG00000009508	-	95	62.209	ENSCJAG00000005398	APOBEC1	78	62.209	Callithrix_jacchus
ENSOPRG00000009508	-	100	62.983	ENSCAFG00000013901	APOBEC1	77	62.983	Canis_familiaris
ENSOPRG00000009508	-	99	62.011	ENSCAFG00020003511	APOBEC1	75	62.011	Canis_lupus_dingo
ENSOPRG00000009508	-	99	59.444	ENSCHIG00000011898	APOBEC1	75	59.444	Capra_hircus
ENSOPRG00000009508	-	77	68.841	ENSTSYG00000029141	APOBEC1	98	68.841	Carlito_syrichta
ENSOPRG00000009508	-	95	58.140	ENSCAPG00000015882	-	80	58.140	Cavia_aperea
ENSOPRG00000009508	-	100	58.011	ENSCPOG00000033068	APOBEC1	77	58.011	Cavia_porcellus
ENSOPRG00000009508	-	100	64.641	ENSCCAG00000022258	APOBEC1	77	64.641	Cebus_capucinus
ENSOPRG00000009508	-	100	65.193	ENSCATG00000021613	APOBEC1	73	65.193	Cercocebus_atys
ENSOPRG00000009508	-	100	59.116	ENSCLAG00000014645	APOBEC1	79	59.116	Chinchilla_lanigera
ENSOPRG00000009508	-	78	66.667	ENSCSAG00000009817	APOBEC1	74	66.667	Chlorocebus_sabaeus
ENSOPRG00000009508	-	94	48.256	ENSCPBG00000014335	-	70	48.256	Chrysemys_picta_bellii
ENSOPRG00000009508	-	94	47.126	ENSCPBG00000014331	-	72	48.193	Chrysemys_picta_bellii
ENSOPRG00000009508	-	90	42.169	ENSCPBG00000017398	-	73	42.169	Chrysemys_picta_bellii
ENSOPRG00000009508	-	99	40.331	ENSCPBG00000014327	-	68	40.331	Chrysemys_picta_bellii
ENSOPRG00000009508	-	95	43.103	ENSCPBG00000014328	-	76	43.103	Chrysemys_picta_bellii
ENSOPRG00000009508	-	100	64.641	ENSCANG00000038359	APOBEC1	79	64.641	Colobus_angolensis_palliatus
ENSOPRG00000009508	-	100	58.564	ENSCGRG00001011130	Apobec1	79	58.564	Cricetulus_griseus_chok1gshd
ENSOPRG00000009508	-	100	58.564	ENSCGRG00000008644	Apobec1	79	58.564	Cricetulus_griseus_crigri
ENSOPRG00000009508	-	100	65.746	ENSDNOG00000010926	APOBEC1	77	65.746	Dasypus_novemcinctus
ENSOPRG00000009508	-	94	56.725	ENSDORG00000023717	Apobec1	80	56.725	Dipodomys_ordii
ENSOPRG00000009508	-	100	64.286	ENSETEG00000004867	APOBEC1	77	64.286	Echinops_telfairi
ENSOPRG00000009508	-	100	61.326	ENSEASG00005015951	APOBEC1	76	61.326	Equus_asinus_asinus
ENSOPRG00000009508	-	78	62.411	ENSECAG00000017163	APOBEC1	74	62.411	Equus_caballus
ENSOPRG00000009508	-	95	57.558	ENSEEUG00000009112	-	76	57.558	Erinaceus_europaeus
ENSOPRG00000009508	-	72	61.538	ENSEEUG00000007530	-	62	61.538	Erinaceus_europaeus
ENSOPRG00000009508	-	100	62.431	ENSFCAG00000009350	APOBEC1	77	62.431	Felis_catus
ENSOPRG00000009508	-	79	49.645	ENSFALG00000007257	-	71	49.645	Ficedula_albicollis
ENSOPRG00000009508	-	88	50.314	ENSFDAG00000018470	APOBEC1	76	50.314	Fukomys_damarensis
ENSOPRG00000009508	-	88	50.000	ENSGAGG00000004947	-	76	56.303	Gopherus_agassizii
ENSOPRG00000009508	-	96	40.571	ENSGAGG00000021744	-	69	40.571	Gopherus_agassizii
ENSOPRG00000009508	-	99	36.757	ENSGAGG00000021745	-	68	37.838	Gopherus_agassizii
ENSOPRG00000009508	-	92	54.237	ENSGAGG00000011837	-	85	54.237	Gopherus_agassizii
ENSOPRG00000009508	-	96	42.286	ENSGAGG00000006624	-	63	42.286	Gopherus_agassizii
ENSOPRG00000009508	-	100	54.696	ENSHGLG00000001495	APOBEC1	77	54.696	Heterocephalus_glaber_female
ENSOPRG00000009508	-	98	55.367	ENSHGLG00100002187	APOBEC1	75	55.367	Heterocephalus_glaber_male
ENSOPRG00000009508	-	93	56.287	ENSSTOG00000021971	APOBEC1	100	68.367	Ictidomys_tridecemlineatus
ENSOPRG00000009508	-	99	61.667	ENSJJAG00000022108	Apobec1	79	61.667	Jaculus_jaculus
ENSOPRG00000009508	-	95	62.791	ENSLAFG00000030837	APOBEC1	77	62.791	Loxodonta_africana
ENSOPRG00000009508	-	100	65.193	ENSMFAG00000000277	APOBEC1	77	65.193	Macaca_fascicularis
ENSOPRG00000009508	-	100	64.641	ENSMNEG00000029670	APOBEC1	77	64.641	Macaca_nemestrina
ENSOPRG00000009508	-	100	65.193	ENSMLEG00000036301	APOBEC1	77	65.193	Mandrillus_leucophaeus
ENSOPRG00000009508	-	92	59.281	ENSMAUG00000022167	Apobec1	75	59.281	Mesocricetus_auratus
ENSOPRG00000009508	-	100	62.431	ENSMICG00000043645	APOBEC1	77	62.431	Microcebus_murinus
ENSOPRG00000009508	-	59	62.264	ENSMOCG00000016170	-	94	62.264	Microtus_ochrogaster
ENSOPRG00000009508	-	100	56.111	ENSMODG00000018004	APOBEC1	77	56.111	Monodelphis_domestica
ENSOPRG00000009508	-	100	56.906	ENSMUSG00000040613	Apobec1	95	58.261	Mus_musculus
ENSOPRG00000009508	-	100	58.011	MGP_PahariEiJ_G0022580	-	95	60.000	Mus_pahari
ENSOPRG00000009508	-	100	56.906	MGP_SPRETEiJ_G0029857	Apobec1	95	58.261	Mus_spretus
ENSOPRG00000009508	-	100	62.431	ENSMPUG00000017532	APOBEC1	77	62.431	Mustela_putorius_furo
ENSOPRG00000009508	-	100	60.221	ENSNGAG00000022607	Apobec1	79	60.221	Nannospalax_galili
ENSOPRG00000009508	-	100	62.983	ENSNLEG00000005342	APOBEC1	77	62.983	Nomascus_leucogenys
ENSOPRG00000009508	-	100	56.354	ENSMEUG00000013406	APOBEC1	77	56.354	Notamacropus_eugenii
ENSOPRG00000009508	-	54	63.265	ENSODEG00000001157	-	100	63.265	Octodon_degus
ENSOPRG00000009508	-	100	62.983	ENSOCUG00000025736	APOBEC1	68	62.983	Oryctolagus_cuniculus
ENSOPRG00000009508	-	99	62.222	ENSOGAG00000026415	APOBEC1	76	62.222	Otolemur_garnettii
ENSOPRG00000009508	-	99	59.444	ENSOARG00000002072	APOBEC1	75	59.444	Ovis_aries
ENSOPRG00000009508	-	100	57.459	ENSPPAG00000027657	APOBEC1	75	57.459	Pan_paniscus
ENSOPRG00000009508	-	100	61.878	ENSPPRG00000012182	APOBEC1	77	61.878	Panthera_pardus
ENSOPRG00000009508	-	100	61.878	ENSPTIG00000020280	APOBEC1	77	61.878	Panthera_tigris_altaica
ENSOPRG00000009508	-	100	62.983	ENSPTRG00000004614	APOBEC1	77	62.983	Pan_troglodytes
ENSOPRG00000009508	-	100	65.193	ENSPANG00000021027	APOBEC1	77	65.193	Papio_anubis
ENSOPRG00000009508	-	94	41.520	ENSPSIG00000012568	-	74	41.520	Pelodiscus_sinensis
ENSOPRG00000009508	-	68	45.872	ENSPSIG00000012791	-	71	45.872	Pelodiscus_sinensis
ENSOPRG00000009508	-	100	55.801	ENSPEMG00000023841	Apobec1	79	55.801	Peromyscus_maniculatus_bairdii
ENSOPRG00000009508	-	100	58.011	ENSPCIG00000023973	APOBEC1	77	58.011	Phascolarctos_cinereus
ENSOPRG00000009508	-	100	62.431	ENSPPYG00000004228	APOBEC1	73	62.431	Pongo_abelii
ENSOPRG00000009508	-	100	62.431	ENSPCAG00000008733	APOBEC1	97	62.431	Procavia_capensis
ENSOPRG00000009508	-	95	63.372	ENSPCOG00000013957	APOBEC1	76	63.372	Propithecus_coquereli
ENSOPRG00000009508	-	77	66.667	ENSPVAG00000010709	APOBEC1	59	66.667	Pteropus_vampyrus
ENSOPRG00000009508	-	100	56.354	ENSRNOG00000015411	Apobec1	79	56.354	Rattus_norvegicus
ENSOPRG00000009508	-	100	63.536	ENSRBIG00000031161	APOBEC1	77	63.536	Rhinopithecus_bieti
ENSOPRG00000009508	-	100	63.536	ENSRROG00000033576	APOBEC1	77	63.536	Rhinopithecus_roxellana
ENSOPRG00000009508	-	95	63.953	ENSSBOG00000030587	APOBEC1	97	63.953	Saimiri_boliviensis_boliviensis
ENSOPRG00000009508	-	98	55.367	ENSSHAG00000008925	APOBEC1	78	55.367	Sarcophilus_harrisii
ENSOPRG00000009508	-	72	60.156	ENSSARG00000011972	-	98	60.156	Sorex_araneus
ENSOPRG00000009508	-	95	57.310	ENSSARG00000000032	-	100	57.310	Sorex_araneus
ENSOPRG00000009508	-	92	43.195	ENSSPUG00000009044	-	65	43.195	Sphenodon_punctatus
ENSOPRG00000009508	-	100	61.878	ENSSSCG00000000668	APOBEC1	77	61.878	Sus_scrofa
ENSOPRG00000009508	-	80	53.846	ENSTGUG00000013118	-	99	53.846	Taeniopygia_guttata
ENSOPRG00000009508	-	95	63.158	ENSTBEG00000010043	APOBEC1	73	63.158	Tupaia_belangeri
ENSOPRG00000009508	-	100	62.431	ENSTTRG00000014015	APOBEC1	97	62.431	Tursiops_truncatus
ENSOPRG00000009508	-	100	61.878	ENSUAMG00000011636	APOBEC1	74	61.878	Ursus_americanus
ENSOPRG00000009508	-	100	61.878	ENSUMAG00000016552	APOBEC1	74	61.878	Ursus_maritimus
ENSOPRG00000009508	-	98	61.582	ENSVPAG00000001343	APOBEC1	75	61.582	Vicugna_pacos
ENSOPRG00000009508	-	100	62.983	ENSVVUG00000010522	APOBEC1	77	62.983	Vulpes_vulpes