EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000010667 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 69950 bases
Position: chrGeneScaffold_2885:17218-87167
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000009745	DND1_DSRM	PF14709.7	1.1e-20	1	1
ENSOPRP00000009745	RRM_1	PF00076.22	3.5e-35	1	3
ENSOPRP00000009745	RRM_1	PF00076.22	3.5e-35	2	3
ENSOPRP00000009745	RRM_1	PF00076.22	3.5e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000010670	A1CF-201	1629	-	ENSOPRP00000009745	543 (aa)	-	UPI00017A2227

Gene Model

Click here to download ENSOPRG00000010667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000010667's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000010667	A1CF	51	54.804	ENSOPRG00000007136	RBM46	99	55.160

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000010667	A1CF	97	85.849	ENSG00000148584	A1CF	100	96.517	Homo_sapiens
ENSOPRG00000010667	A1CF	97	65.981	ENSAPOG00000008259	a1cf	91	66.004	Acanthochromis_polyacanthus
ENSOPRG00000010667	A1CF	96	84.030	ENSAMEG00000000523	A1CF	89	84.000	Ailuropoda_melanoleuca
ENSOPRG00000010667	A1CF	100	66.014	ENSACIG00000008632	a1cf	88	68.519	Amphilophus_citrinellus
ENSOPRG00000010667	A1CF	97	67.035	ENSAOCG00000023744	a1cf	96	68.116	Amphiprion_ocellaris
ENSOPRG00000010667	A1CF	97	68.140	ENSAPEG00000009537	a1cf	90	69.202	Amphiprion_percula
ENSOPRG00000010667	A1CF	100	66.963	ENSATEG00000013720	a1cf	89	69.686	Anabas_testudineus
ENSOPRG00000010667	A1CF	97	80.263	ENSAPLG00000002964	A1CF	89	80.798	Anas_platyrhynchos
ENSOPRG00000010667	A1CF	98	73.978	ENSACAG00000015269	A1CF	89	74.715	Anolis_carolinensis
ENSOPRG00000010667	A1CF	98	83.865	ENSANAG00000019974	A1CF	88	83.810	Aotus_nancymaae
ENSOPRG00000010667	A1CF	97	66.239	ENSACLG00000017428	a1cf	91	68.333	Astatotilapia_calliptera
ENSOPRG00000010667	A1CF	97	66.229	ENSAMXG00000018180	a1cf	87	66.352	Astyanax_mexicanus
ENSOPRG00000010667	A1CF	97	82.955	ENSBTAG00000021195	A1CF	96	82.857	Bos_taurus
ENSOPRG00000010667	A1CF	98	85.553	ENSCJAG00000005045	A1CF	88	85.524	Callithrix_jacchus
ENSOPRG00000010667	A1CF	96	83.650	ENSCAFG00000015581	A1CF	89	83.619	Canis_familiaris
ENSOPRG00000010667	A1CF	96	83.650	ENSCAFG00020026421	A1CF	98	74.662	Canis_lupus_dingo
ENSOPRG00000010667	A1CF	97	83.712	ENSCHIG00000020411	A1CF	88	83.619	Capra_hircus
ENSOPRG00000010667	A1CF	90	83.603	ENSTSYG00000001755	A1CF	88	82.317	Carlito_syrichta
ENSOPRG00000010667	A1CF	100	64.417	ENSCAPG00000017386	A1CF	85	64.417	Cavia_aperea
ENSOPRG00000010667	A1CF	97	85.338	ENSCPOG00000009807	A1CF	88	85.524	Cavia_porcellus
ENSOPRG00000010667	A1CF	98	85.421	ENSCCAG00000018168	A1CF	89	85.524	Cebus_capucinus
ENSOPRG00000010667	A1CF	97	84.023	ENSCATG00000043715	A1CF	93	83.871	Cercocebus_atys
ENSOPRG00000010667	A1CF	97	84.369	ENSCLAG00000010424	A1CF	88	84.411	Chinchilla_lanigera
ENSOPRG00000010667	A1CF	97	85.472	ENSCSAG00000007032	A1CF	89	85.333	Chlorocebus_sabaeus
ENSOPRG00000010667	A1CF	94	78.311	ENSCHOG00000009089	A1CF	86	78.378	Choloepus_hoffmanni
ENSOPRG00000010667	A1CF	100	77.355	ENSCPBG00000026464	A1CF	89	79.468	Chrysemys_picta_bellii
ENSOPRG00000010667	A1CF	97	85.283	ENSCANG00000038032	A1CF	89	85.143	Colobus_angolensis_palliatus
ENSOPRG00000010667	A1CF	97	83.902	ENSCGRG00001017413	A1cf	88	84.000	Cricetulus_griseus_chok1gshd
ENSOPRG00000010667	A1CF	97	83.871	ENSCGRG00000017332	A1cf	88	84.000	Cricetulus_griseus_crigri
ENSOPRG00000010667	A1CF	100	66.545	ENSCSEG00000002361	a1cf	88	68.750	Cynoglossus_semilaevis
ENSOPRG00000010667	A1CF	100	66.075	ENSCVAG00000010520	a1cf	89	68.946	Cyprinodon_variegatus
ENSOPRG00000010667	A1CF	97	70.037	ENSDARG00000002968	a1cf	89	70.943	Danio_rerio
ENSOPRG00000010667	A1CF	97	83.902	ENSDNOG00000002829	A1CF	88	84.000	Dasypus_novemcinctus
ENSOPRG00000010667	A1CF	76	91.367	ENSETEG00000012527	A1CF	69	91.176	Echinops_telfairi
ENSOPRG00000010667	A1CF	97	85.227	ENSEASG00005012924	A1CF	88	85.143	Equus_asinus_asinus
ENSOPRG00000010667	A1CF	97	84.659	ENSECAG00000010424	A1CF	88	84.571	Equus_caballus
ENSOPRG00000010667	A1CF	69	94.309	ENSEEUG00000000013	A1CF	77	94.309	Erinaceus_europaeus
ENSOPRG00000010667	A1CF	97	69.963	ENSELUG00000003159	a1cf	90	71.132	Esox_lucius
ENSOPRG00000010667	A1CF	97	81.250	ENSFCAG00000011179	A1CF	89	81.143	Felis_catus
ENSOPRG00000010667	A1CF	97	76.880	ENSFALG00000013183	A1CF	89	77.567	Ficedula_albicollis
ENSOPRG00000010667	A1CF	97	83.271	ENSFDAG00000019371	A1CF	88	83.429	Fukomys_damarensis
ENSOPRG00000010667	A1CF	100	60.568	ENSFHEG00000019652	a1cf	96	79.688	Fundulus_heteroclitus
ENSOPRG00000010667	A1CF	100	61.691	ENSGMOG00000018943	a1cf	89	62.804	Gadus_morhua
ENSOPRG00000010667	A1CF	92	78.044	ENSGALG00000003765	A1CF	85	78.586	Gallus_gallus
ENSOPRG00000010667	A1CF	100	61.221	ENSGAFG00000014868	a1cf	87	63.551	Gambusia_affinis
ENSOPRG00000010667	A1CF	100	64.632	ENSGACG00000010241	a1cf	91	65.171	Gasterosteus_aculeatus
ENSOPRG00000010667	A1CF	94	76.879	ENSGAGG00000016508	A1CF	86	79.108	Gopherus_agassizii
ENSOPRG00000010667	A1CF	97	85.849	ENSGGOG00000009670	A1CF	88	85.714	Gorilla_gorilla
ENSOPRG00000010667	A1CF	100	65.480	ENSHBUG00000021959	a1cf	88	68.704	Haplochromis_burtoni
ENSOPRG00000010667	A1CF	96	84.762	ENSHGLG00000008955	A1CF	88	84.762	Heterocephalus_glaber_female
ENSOPRG00000010667	A1CF	96	84.000	ENSHGLG00100000518	A1CF	88	84.000	Heterocephalus_glaber_male
ENSOPRG00000010667	A1CF	100	63.251	ENSHCOG00000017669	a1cf	89	65.441	Hippocampus_comes
ENSOPRG00000010667	A1CF	97	72.253	ENSIPUG00000010367	a1cf	95	72.642	Ictalurus_punctatus
ENSOPRG00000010667	A1CF	97	68.877	ENSKMAG00000006568	a1cf	88	69.944	Kryptolebias_marmoratus
ENSOPRG00000010667	A1CF	97	68.066	ENSLBEG00000020994	a1cf	88	69.358	Labrus_bergylta
ENSOPRG00000010667	A1CF	99	70.631	ENSLACG00000008061	A1CF	89	72.727	Latimeria_chalumnae
ENSOPRG00000010667	A1CF	97	74.296	ENSLOCG00000006302	a1cf	89	74.480	Lepisosteus_oculatus
ENSOPRG00000010667	A1CF	98	82.959	ENSLAFG00000015462	A1CF	88	83.619	Loxodonta_africana
ENSOPRG00000010667	A1CF	97	84.398	ENSMFAG00000035948	A1CF	93	84.250	Macaca_fascicularis
ENSOPRG00000010667	A1CF	97	83.962	ENSMMUG00000007077	A1CF	89	83.810	Macaca_mulatta
ENSOPRG00000010667	A1CF	97	85.094	ENSMNEG00000031454	A1CF	93	84.952	Macaca_nemestrina
ENSOPRG00000010667	A1CF	97	85.094	ENSMLEG00000037223	A1CF	93	83.871	Mandrillus_leucophaeus
ENSOPRG00000010667	A1CF	100	64.758	ENSMAMG00000010402	a1cf	88	67.598	Mastacembelus_armatus
ENSOPRG00000010667	A1CF	97	69.043	ENSMZEG00005013245	a1cf	89	70.076	Maylandia_zebra
ENSOPRG00000010667	A1CF	97	78.799	ENSMGAG00000001507	A1CF	89	79.317	Meleagris_gallopavo
ENSOPRG00000010667	A1CF	97	82.922	ENSMAUG00000007422	A1cf	88	83.048	Mesocricetus_auratus
ENSOPRG00000010667	A1CF	97	83.491	ENSMICG00000003377	A1CF	88	83.619	Microcebus_murinus
ENSOPRG00000010667	A1CF	97	83.208	ENSMOCG00000021536	A1cf	88	83.238	Microtus_ochrogaster
ENSOPRG00000010667	A1CF	91	62.305	ENSMMOG00000009422	a1cf	86	64.453	Mola_mola
ENSOPRG00000010667	A1CF	97	79.017	ENSMODG00000016478	A1CF	96	79.278	Monodelphis_domestica
ENSOPRG00000010667	A1CF	99	64.457	ENSMALG00000012992	a1cf	91	65.341	Monopterus_albus
ENSOPRG00000010667	A1CF	97	82.453	MGP_CAROLIEiJ_G0022873	A1cf	88	82.476	Mus_caroli
ENSOPRG00000010667	A1CF	97	82.453	ENSMUSG00000052595	A1cf	99	79.474	Mus_musculus
ENSOPRG00000010667	A1CF	100	81.319	MGP_PahariEiJ_G0014366	A1cf	88	81.905	Mus_pahari
ENSOPRG00000010667	A1CF	97	82.453	MGP_SPRETEiJ_G0023792	A1cf	89	82.476	Mus_spretus
ENSOPRG00000010667	A1CF	96	77.714	ENSMPUG00000016971	A1CF	89	77.714	Mustela_putorius_furo
ENSOPRG00000010667	A1CF	97	84.091	ENSMLUG00000016071	A1CF	88	84.000	Myotis_lucifugus
ENSOPRG00000010667	A1CF	97	83.208	ENSNGAG00000015136	A1cf	88	83.429	Nannospalax_galili
ENSOPRG00000010667	A1CF	100	65.658	ENSNBRG00000001712	a1cf	88	68.889	Neolamprologus_brichardi
ENSOPRG00000010667	A1CF	97	85.849	ENSNLEG00000012028	A1CF	88	85.714	Nomascus_leucogenys
ENSOPRG00000010667	A1CF	91	78.831	ENSMEUG00000015909	A1CF	88	79.108	Notamacropus_eugenii
ENSOPRG00000010667	A1CF	100	66.370	ENSONIG00000019105	a1cf	88	68.889	Oreochromis_niloticus
ENSOPRG00000010667	A1CF	86	75.636	ENSOANG00000007360	A1CF	99	75.636	Ornithorhynchus_anatinus
ENSOPRG00000010667	A1CF	100	82.601	ENSOCUG00000011587	A1CF	91	82.601	Oryctolagus_cuniculus
ENSOPRG00000010667	A1CF	99	67.384	ENSORLG00000013342	a1cf	91	68.889	Oryzias_latipes
ENSOPRG00000010667	A1CF	97	69.301	ENSORLG00020000586	a1cf	88	69.074	Oryzias_latipes_hni
ENSOPRG00000010667	A1CF	97	69.118	ENSORLG00015018569	a1cf	88	69.259	Oryzias_latipes_hsok
ENSOPRG00000010667	A1CF	100	67.201	ENSOMEG00000013531	a1cf	88	68.030	Oryzias_melastigma
ENSOPRG00000010667	A1CF	96	84.000	ENSOGAG00000012884	A1CF	89	84.000	Otolemur_garnettii
ENSOPRG00000010667	A1CF	97	84.280	ENSOARG00000013695	A1CF	88	84.190	Ovis_aries
ENSOPRG00000010667	A1CF	94	83.203	ENSPPAG00000028115	A1CF	99	85.132	Pan_paniscus
ENSOPRG00000010667	A1CF	97	83.144	ENSPPRG00000012180	A1CF	89	83.048	Panthera_pardus
ENSOPRG00000010667	A1CF	97	83.144	ENSPTIG00000021223	A1CF	89	83.048	Panthera_tigris_altaica
ENSOPRG00000010667	A1CF	97	85.660	ENSPTRG00000002508	A1CF	88	85.524	Pan_troglodytes
ENSOPRG00000010667	A1CF	97	84.398	ENSPANG00000021988	A1CF	93	84.250	Papio_anubis
ENSOPRG00000010667	A1CF	97	71.455	ENSPKIG00000025176	a1cf	89	72.075	Paramormyrops_kingsleyae
ENSOPRG00000010667	A1CF	100	76.087	ENSPSIG00000010318	A1CF	89	78.327	Pelodiscus_sinensis
ENSOPRG00000010667	A1CF	96	60.762	ENSPMGG00000013359	a1cf	89	61.333	Periophthalmus_magnuspinnatus
ENSOPRG00000010667	A1CF	100	82.418	ENSPEMG00000015021	A1cf	88	83.429	Peromyscus_maniculatus_bairdii
ENSOPRG00000010667	A1CF	97	79.773	ENSPCIG00000002175	A1CF	89	80.038	Phascolarctos_cinereus
ENSOPRG00000010667	A1CF	100	67.496	ENSPFOG00000006683	a1cf	88	70.425	Poecilia_formosa
ENSOPRG00000010667	A1CF	100	67.318	ENSPFOG00000007437	-	88	70.240	Poecilia_formosa
ENSOPRG00000010667	A1CF	100	66.075	ENSPLAG00000000026	a1cf	88	68.946	Poecilia_latipinna
ENSOPRG00000010667	A1CF	100	66.075	ENSPLAG00000001210	-	88	68.946	Poecilia_latipinna
ENSOPRG00000010667	A1CF	89	85.149	ENSPMEG00000000921	a1cf	87	85.149	Poecilia_mexicana
ENSOPRG00000010667	A1CF	89	85.149	ENSPMEG00000015529	-	87	85.149	Poecilia_mexicana
ENSOPRG00000010667	A1CF	97	68.545	ENSPREG00000016298	a1cf	88	70.055	Poecilia_reticulata
ENSOPRG00000010667	A1CF	97	84.151	ENSPPYG00000002819	A1CF	88	84.000	Pongo_abelii
ENSOPRG00000010667	A1CF	68	88.618	ENSPCAG00000006463	A1CF	61	88.618	Procavia_capensis
ENSOPRG00000010667	A1CF	100	83.516	ENSPCOG00000024172	A1CF	88	84.571	Propithecus_coquereli
ENSOPRG00000010667	A1CF	100	66.904	ENSPNYG00000017944	a1cf	88	70.185	Pundamilia_nyererei
ENSOPRG00000010667	A1CF	97	71.455	ENSPNAG00000007704	a1cf	88	71.698	Pygocentrus_nattereri
ENSOPRG00000010667	A1CF	97	80.943	ENSRNOG00000033195	A1cf	88	80.952	Rattus_norvegicus
ENSOPRG00000010667	A1CF	97	78.195	ENSRBIG00000042892	A1CF	87	79.592	Rhinopithecus_bieti
ENSOPRG00000010667	A1CF	97	85.472	ENSRROG00000041398	A1CF	89	85.333	Rhinopithecus_roxellana
ENSOPRG00000010667	A1CF	98	85.741	ENSSBOG00000021930	A1CF	89	85.714	Saimiri_boliviensis_boliviensis
ENSOPRG00000010667	A1CF	97	80.529	ENSSHAG00000005096	A1CF	89	80.798	Sarcophilus_harrisii
ENSOPRG00000010667	A1CF	86	85.572	ENSSFOG00015011774	a1cf	86	85.572	Scleropages_formosus
ENSOPRG00000010667	A1CF	100	66.607	ENSSMAG00000013271	a1cf	88	68.577	Scophthalmus_maximus
ENSOPRG00000010667	A1CF	100	67.029	ENSSDUG00000013930	a1cf	88	69.623	Seriola_dumerili
ENSOPRG00000010667	A1CF	100	59.459	ENSSLDG00000004290	a1cf	88	61.538	Seriola_lalandi_dorsalis
ENSOPRG00000010667	A1CF	91	93.186	ENSSARG00000005940	A1CF	84	93.145	Sorex_araneus
ENSOPRG00000010667	A1CF	93	78.501	ENSSPUG00000006797	A1CF	84	79.116	Sphenodon_punctatus
ENSOPRG00000010667	A1CF	97	84.848	ENSSSCG00000010431	A1CF	88	84.762	Sus_scrofa
ENSOPRG00000010667	A1CF	97	78.947	ENSTGUG00000005090	A1CF	88	79.658	Taeniopygia_guttata
ENSOPRG00000010667	A1CF	100	66.014	ENSTRUG00000001982	a1cf	88	67.593	Takifugu_rubripes
ENSOPRG00000010667	A1CF	87	82.673	ENSTNIG00000003580	a1cf	79	82.673	Tetraodon_nigroviridis
ENSOPRG00000010667	A1CF	93	75.490	ENSTTRG00000013190	A1CF	84	75.345	Tursiops_truncatus
ENSOPRG00000010667	A1CF	97	82.386	ENSUAMG00000020065	A1CF	89	82.286	Ursus_americanus
ENSOPRG00000010667	A1CF	97	83.712	ENSUMAG00000011162	A1CF	89	83.619	Ursus_maritimus
ENSOPRG00000010667	A1CF	82	78.667	ENSVPAG00000006130	A1CF	74	78.747	Vicugna_pacos
ENSOPRG00000010667	A1CF	97	82.008	ENSVVUG00000002504	A1CF	96	82.095	Vulpes_vulpes
ENSOPRG00000010667	A1CF	87	87.065	ENSXETG00000006611	a1cf	78	87.065	Xenopus_tropicalis
ENSOPRG00000010667	A1CF	100	67.442	ENSXCOG00000003302	a1cf	88	69.832	Xiphophorus_couchianus
ENSOPRG00000010667	A1CF	100	68.694	ENSXMAG00000016703	a1cf	88	71.136	Xiphophorus_maculatus