EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000010808 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 4635 bases
Position: chrGeneScaffold_5094:106809-111443
Accession: 10771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000009869	RRM_1	PF00076.22	1.7e-39	1	2
ENSOPRP00000009869	RRM_1	PF00076.22	1.7e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000010803	SF3B4-201	1269	-	ENSOPRP00000009869	422 (aa)	-	UPI0001777E2F

Gene Model

Click here to download ENSOPRG00000010808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000010808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000010808	SF3B4	54	33.200	ENSOPRG00000016546	-	65	35.359
ENSOPRG00000010808	SF3B4	54	36.585	ENSOPRG00000011846	PABPC1L	58	36.585
ENSOPRG00000010808	SF3B4	70	41.463	ENSOPRG00000009667	PABPC3	56	41.463

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000010808	SF3B4	99	97.150	ENSG00000143368	SF3B4	99	97.150	Homo_sapiens
ENSOPRG00000010808	SF3B4	54	93.043	ENSAPOG00000017647	sf3b4	57	93.421	Acanthochromis_polyacanthus
ENSOPRG00000010808	SF3B4	99	97.387	ENSAMEG00000010073	SF3B4	99	97.387	Ailuropoda_melanoleuca
ENSOPRG00000010808	SF3B4	50	95.261	ENSAOCG00000019801	sf3b4	57	93.421	Amphiprion_ocellaris
ENSOPRG00000010808	SF3B4	50	95.261	ENSAPEG00000010365	sf3b4	57	93.421	Amphiprion_percula
ENSOPRG00000010808	SF3B4	54	93.043	ENSATEG00000012844	sf3b4	57	93.421	Anabas_testudineus
ENSOPRG00000010808	SF3B4	50	95.327	ENSACAG00000010019	SF3B4	55	93.860	Anolis_carolinensis
ENSOPRG00000010808	SF3B4	99	97.150	ENSANAG00000031025	SF3B4	99	97.150	Aotus_nancymaae
ENSOPRG00000010808	SF3B4	56	91.561	ENSACLG00000014260	sf3b4	57	93.421	Astatotilapia_calliptera
ENSOPRG00000010808	SF3B4	54	93.043	ENSAMXG00000008282	sf3b4	57	93.421	Astyanax_mexicanus
ENSOPRG00000010808	SF3B4	84	95.518	ENSBTAG00000012793	-	88	95.518	Bos_taurus
ENSOPRG00000010808	SF3B4	99	97.387	ENSBTAG00000012495	SF3B4	99	97.387	Bos_taurus
ENSOPRG00000010808	SF3B4	90	78.351	ENSCJAG00000042351	SF3B4	87	78.351	Callithrix_jacchus
ENSOPRG00000010808	SF3B4	99	96.912	ENSCAFG00000011617	SF3B4	99	96.912	Canis_familiaris
ENSOPRG00000010808	SF3B4	99	96.912	ENSCAFG00020019775	SF3B4	99	96.912	Canis_lupus_dingo
ENSOPRG00000010808	SF3B4	99	97.387	ENSCHIG00000025663	-	99	97.387	Capra_hircus
ENSOPRG00000010808	SF3B4	99	97.150	ENSTSYG00000009295	SF3B4	99	97.150	Carlito_syrichta
ENSOPRG00000010808	SF3B4	99	97.150	ENSCPOG00000008267	SF3B4	99	97.150	Cavia_porcellus
ENSOPRG00000010808	SF3B4	74	87.859	ENSCCAG00000019823	-	71	88.040	Cebus_capucinus
ENSOPRG00000010808	SF3B4	99	82.353	ENSCCAG00000021751	-	51	94.737	Cebus_capucinus
ENSOPRG00000010808	SF3B4	99	97.150	ENSCATG00000033114	SF3B4	99	97.150	Cercocebus_atys
ENSOPRG00000010808	SF3B4	99	97.150	ENSCLAG00000015851	SF3B4	99	97.150	Chinchilla_lanigera
ENSOPRG00000010808	SF3B4	99	97.150	ENSCSAG00000018129	SF3B4	99	97.150	Chlorocebus_sabaeus
ENSOPRG00000010808	SF3B4	50	95.327	ENSCPBG00000008041	SF3B4	55	94.298	Chrysemys_picta_bellii
ENSOPRG00000010808	SF3B4	51	86.047	ENSCING00000002337	-	57	85.782	Ciona_intestinalis
ENSOPRG00000010808	SF3B4	99	97.150	ENSCANG00000035579	SF3B4	99	97.150	Colobus_angolensis_palliatus
ENSOPRG00000010808	SF3B4	99	97.625	ENSCGRG00001003590	Sf3b4	99	97.625	Cricetulus_griseus_chok1gshd
ENSOPRG00000010808	SF3B4	99	97.625	ENSCGRG00000016914	Sf3b4	99	97.625	Cricetulus_griseus_crigri
ENSOPRG00000010808	SF3B4	54	93.043	ENSDARG00000018574	sf3b4	57	93.421	Danio_rerio
ENSOPRG00000010808	SF3B4	97	78.537	ENSDNOG00000037231	-	50	82.143	Dasypus_novemcinctus
ENSOPRG00000010808	SF3B4	98	94.431	ENSDNOG00000048908	-	99	94.431	Dasypus_novemcinctus
ENSOPRG00000010808	SF3B4	99	97.387	ENSDORG00000016366	Sf3b4	99	97.387	Dipodomys_ordii
ENSOPRG00000010808	SF3B4	52	82.353	FBgn0015818	Spx	61	83.886	Drosophila_melanogaster
ENSOPRG00000010808	SF3B4	77	89.506	ENSETEG00000008963	SF3B4	76	89.506	Echinops_telfairi
ENSOPRG00000010808	SF3B4	99	97.387	ENSEASG00005001477	SF3B4	99	97.387	Equus_asinus_asinus
ENSOPRG00000010808	SF3B4	99	97.387	ENSECAG00000024737	SF3B4	99	97.387	Equus_caballus
ENSOPRG00000010808	SF3B4	99	97.387	ENSFCAG00000010106	SF3B4	99	97.387	Felis_catus
ENSOPRG00000010808	SF3B4	99	97.150	ENSFDAG00000009286	SF3B4	99	97.150	Fukomys_damarensis
ENSOPRG00000010808	SF3B4	50	95.327	ENSGALG00000013352	SF3B4	55	93.860	Gallus_gallus
ENSOPRG00000010808	SF3B4	63	88.679	ENSGAFG00000010181	sf3b4	58	93.421	Gambusia_affinis
ENSOPRG00000010808	SF3B4	94	71.465	ENSGGOG00000038845	-	54	85.238	Gorilla_gorilla
ENSOPRG00000010808	SF3B4	99	97.150	ENSGGOG00000004761	SF3B4	99	97.150	Gorilla_gorilla
ENSOPRG00000010808	SF3B4	56	91.561	ENSHBUG00000002028	sf3b4	57	93.421	Haplochromis_burtoni
ENSOPRG00000010808	SF3B4	99	97.150	ENSHGLG00000012360	SF3B4	99	97.150	Heterocephalus_glaber_female
ENSOPRG00000010808	SF3B4	99	96.200	ENSHGLG00100008533	SF3B4	99	96.200	Heterocephalus_glaber_male
ENSOPRG00000010808	SF3B4	54	93.478	ENSIPUG00000012242	Sf3b4	57	93.860	Ictalurus_punctatus
ENSOPRG00000010808	SF3B4	99	97.387	ENSSTOG00000000684	-	99	97.387	Ictidomys_tridecemlineatus
ENSOPRG00000010808	SF3B4	76	80.603	ENSJJAG00000022500	Sf3b4	95	80.603	Jaculus_jaculus
ENSOPRG00000010808	SF3B4	56	91.983	ENSKMAG00000008154	sf3b4	58	93.860	Kryptolebias_marmoratus
ENSOPRG00000010808	SF3B4	55	93.133	ENSLBEG00000026818	sf3b4	57	93.860	Labrus_bergylta
ENSOPRG00000010808	SF3B4	54	92.982	ENSLACG00000004436	SF3B4	63	92.982	Latimeria_chalumnae
ENSOPRG00000010808	SF3B4	55	93.103	ENSLOCG00000009048	sf3b4	54	93.860	Lepisosteus_oculatus
ENSOPRG00000010808	SF3B4	99	96.919	ENSLAFG00000008531	SF3B4	99	96.919	Loxodonta_africana
ENSOPRG00000010808	SF3B4	99	97.150	ENSMFAG00000042395	SF3B4	99	97.150	Macaca_fascicularis
ENSOPRG00000010808	SF3B4	99	97.150	ENSMMUG00000007256	SF3B4	99	97.150	Macaca_mulatta
ENSOPRG00000010808	SF3B4	99	97.150	ENSMNEG00000031839	SF3B4	99	97.150	Macaca_nemestrina
ENSOPRG00000010808	SF3B4	99	97.150	ENSMLEG00000038667	SF3B4	99	97.150	Mandrillus_leucophaeus
ENSOPRG00000010808	SF3B4	56	92.827	ENSMAMG00000014692	sf3b4	57	93.421	Mastacembelus_armatus
ENSOPRG00000010808	SF3B4	56	91.561	ENSMZEG00005026741	sf3b4	57	93.421	Maylandia_zebra
ENSOPRG00000010808	SF3B4	50	95.327	ENSMGAG00000000653	SF3B4	55	93.860	Meleagris_gallopavo
ENSOPRG00000010808	SF3B4	99	97.625	ENSMAUG00000015266	Sf3b4	99	97.625	Mesocricetus_auratus
ENSOPRG00000010808	SF3B4	99	97.387	ENSMICG00000044961	SF3B4	99	97.387	Microcebus_murinus
ENSOPRG00000010808	SF3B4	99	97.387	ENSMOCG00000013658	-	99	97.387	Microtus_ochrogaster
ENSOPRG00000010808	SF3B4	99	96.675	ENSMODG00000018767	SF3B4	99	96.675	Monodelphis_domestica
ENSOPRG00000010808	SF3B4	54	93.392	ENSMALG00000006174	sf3b4	57	92.982	Monopterus_albus
ENSOPRG00000010808	SF3B4	99	97.387	MGP_CAROLIEiJ_G0025365	Sf3b4	99	97.387	Mus_caroli
ENSOPRG00000010808	SF3B4	99	97.625	ENSMUSG00000068856	Sf3b4	99	97.625	Mus_musculus
ENSOPRG00000010808	SF3B4	99	97.625	MGP_PahariEiJ_G0026809	Sf3b4	99	97.625	Mus_pahari
ENSOPRG00000010808	SF3B4	99	97.625	MGP_SPRETEiJ_G0026309	Sf3b4	99	97.625	Mus_spretus
ENSOPRG00000010808	SF3B4	99	97.387	ENSMPUG00000005563	SF3B4	99	97.387	Mustela_putorius_furo
ENSOPRG00000010808	SF3B4	99	97.150	ENSMLUG00000010789	SF3B4	99	97.150	Myotis_lucifugus
ENSOPRG00000010808	SF3B4	99	97.387	ENSNGAG00000016337	Sf3b4	99	97.387	Nannospalax_galili
ENSOPRG00000010808	SF3B4	56	91.983	ENSNBRG00000013865	sf3b4	57	93.860	Neolamprologus_brichardi
ENSOPRG00000010808	SF3B4	99	74.109	ENSNLEG00000000537	-	58	86.404	Nomascus_leucogenys
ENSOPRG00000010808	SF3B4	99	67.381	ENSNLEG00000009693	-	99	69.340	Nomascus_leucogenys
ENSOPRG00000010808	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSOPRG00000010808	SF3B4	75	83.596	ENSODEG00000003597	-	79	83.596	Octodon_degus
ENSOPRG00000010808	SF3B4	56	91.139	ENSONIG00000002730	sf3b4	57	93.421	Oreochromis_niloticus
ENSOPRG00000010808	SF3B4	99	56.047	ENSOANG00000004768	-	50	77.103	Ornithorhynchus_anatinus
ENSOPRG00000010808	SF3B4	99	97.387	ENSOCUG00000004614	SF3B4	99	97.387	Oryctolagus_cuniculus
ENSOPRG00000010808	SF3B4	55	92.672	ENSORLG00000003062	sf3b4	59	93.421	Oryzias_latipes
ENSOPRG00000010808	SF3B4	99	97.387	ENSOGAG00000006265	SF3B4	99	97.387	Otolemur_garnettii
ENSOPRG00000010808	SF3B4	99	97.387	ENSOARG00000020718	-	99	97.387	Ovis_aries
ENSOPRG00000010808	SF3B4	99	97.150	ENSPPAG00000040904	SF3B4	99	97.150	Pan_paniscus
ENSOPRG00000010808	SF3B4	99	79.335	ENSPPAG00000030024	-	56	85.526	Pan_paniscus
ENSOPRG00000010808	SF3B4	99	97.387	ENSPPRG00000007384	SF3B4	99	97.387	Panthera_pardus
ENSOPRG00000010808	SF3B4	99	96.912	ENSPTIG00000014530	SF3B4	99	96.912	Panthera_tigris_altaica
ENSOPRG00000010808	SF3B4	99	77.197	ENSPTRG00000049727	-	57	85.965	Pan_troglodytes
ENSOPRG00000010808	SF3B4	99	97.150	ENSPTRG00000001243	SF3B4	99	97.150	Pan_troglodytes
ENSOPRG00000010808	SF3B4	99	97.150	ENSPANG00000005126	SF3B4	99	97.150	Papio_anubis
ENSOPRG00000010808	SF3B4	55	93.133	ENSPKIG00000020669	sf3b4	60	93.860	Paramormyrops_kingsleyae
ENSOPRG00000010808	SF3B4	66	72.143	ENSPSIG00000009565	SF3B4	68	92.973	Pelodiscus_sinensis
ENSOPRG00000010808	SF3B4	99	97.625	ENSPEMG00000017568	Sf3b4	99	97.625	Peromyscus_maniculatus_bairdii
ENSOPRG00000010808	SF3B4	61	84.825	ENSPMAG00000007842	-	50	90.521	Petromyzon_marinus
ENSOPRG00000010808	SF3B4	99	96.675	ENSPCIG00000008765	SF3B4	99	96.675	Phascolarctos_cinereus
ENSOPRG00000010808	SF3B4	64	86.813	ENSPFOG00000005754	sf3b4	58	92.982	Poecilia_formosa
ENSOPRG00000010808	SF3B4	64	86.813	ENSPLAG00000001401	sf3b4	63	92.982	Poecilia_latipinna
ENSOPRG00000010808	SF3B4	64	86.813	ENSPREG00000011076	sf3b4	57	93.421	Poecilia_reticulata
ENSOPRG00000010808	SF3B4	99	97.387	ENSPCOG00000015399	SF3B4	99	97.387	Propithecus_coquereli
ENSOPRG00000010808	SF3B4	99	97.387	ENSPVAG00000014171	SF3B4	99	97.387	Pteropus_vampyrus
ENSOPRG00000010808	SF3B4	56	91.561	ENSPNYG00000012700	sf3b4	57	93.421	Pundamilia_nyererei
ENSOPRG00000010808	SF3B4	99	97.625	ENSRNOG00000021181	Sf3b4	99	97.625	Rattus_norvegicus
ENSOPRG00000010808	SF3B4	99	97.150	ENSRBIG00000043392	SF3B4	99	97.150	Rhinopithecus_bieti
ENSOPRG00000010808	SF3B4	99	97.150	ENSRROG00000029366	SF3B4	99	97.150	Rhinopithecus_roxellana
ENSOPRG00000010808	SF3B4	99	96.912	ENSSBOG00000012310	-	99	96.912	Saimiri_boliviensis_boliviensis
ENSOPRG00000010808	SF3B4	99	94.062	ENSSHAG00000004043	SF3B4	99	96.032	Sarcophilus_harrisii
ENSOPRG00000010808	SF3B4	56	92.405	ENSSFOG00015008864	sf3b4	56	93.860	Scleropages_formosus
ENSOPRG00000010808	SF3B4	50	95.261	ENSSMAG00000006837	sf3b4	57	93.421	Scophthalmus_maximus
ENSOPRG00000010808	SF3B4	54	93.478	ENSSDUG00000012064	sf3b4	57	93.860	Seriola_dumerili
ENSOPRG00000010808	SF3B4	54	93.478	ENSSLDG00000014226	sf3b4	57	93.860	Seriola_lalandi_dorsalis
ENSOPRG00000010808	SF3B4	72	91.020	ENSSPUG00000001028	SF3B4	57	94.298	Sphenodon_punctatus
ENSOPRG00000010808	SF3B4	54	93.913	ENSSPAG00000019219	sf3b4	57	93.860	Stegastes_partitus
ENSOPRG00000010808	SF3B4	99	97.150	ENSSSCG00000006665	-	99	97.150	Sus_scrofa
ENSOPRG00000010808	SF3B4	86	64.266	ENSSSCG00000039440	-	65	87.097	Sus_scrofa
ENSOPRG00000010808	SF3B4	56	92.797	ENSTGUG00000004470	SF3B4	90	93.860	Taeniopygia_guttata
ENSOPRG00000010808	SF3B4	54	92.511	ENSTRUG00000004516	sf3b4	57	92.105	Takifugu_rubripes
ENSOPRG00000010808	SF3B4	99	97.387	ENSTTRG00000005217	SF3B4	99	97.387	Tursiops_truncatus
ENSOPRG00000010808	SF3B4	99	97.387	ENSUAMG00000022468	SF3B4	99	97.387	Ursus_americanus
ENSOPRG00000010808	SF3B4	99	96.912	ENSUMAG00000003802	SF3B4	99	96.912	Ursus_maritimus
ENSOPRG00000010808	SF3B4	97	97.311	ENSVPAG00000008152	SF3B4	99	97.311	Vicugna_pacos
ENSOPRG00000010808	SF3B4	99	90.191	ENSVVUG00000007732	-	100	90.191	Vulpes_vulpes
ENSOPRG00000010808	SF3B4	54	93.043	ENSXCOG00000019895	sf3b4	58	93.421	Xiphophorus_couchianus
ENSOPRG00000010808	SF3B4	54	93.043	ENSXMAG00000003772	sf3b4	58	93.421	Xiphophorus_maculatus